Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30578
         (796 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    25   2.7  
AY146745-1|AAO12105.1|  153|Anopheles gambiae odorant-binding pr...    24   4.7  
AJ697725-1|CAG26918.1|  153|Anopheles gambiae putative odorant-b...    24   4.7  
AF437886-1|AAL84181.1|  153|Anopheles gambiae odorant binding pr...    24   4.7  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    24   6.2  

>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1009

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
 Frame = +3

Query: 267  SKHGMYANTMHNYQL*FN--CKAFKNP--SEHCV-HC 362
            S HG YA  +H  QL  +  C A + P  +EH + HC
Sbjct: 894  SSHGFYAYQLHRMQLTGSPLCDACEEPEDAEHTIFHC 930


>AY146745-1|AAO12105.1|  153|Anopheles gambiae odorant-binding
           protein AgamOBP3 protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +1

Query: 55  ILATRHVRLRPDAGYPPPSL 114
           IL  R    R DA YPPP L
Sbjct: 24  ILMVRSDEPRRDANYPPPEL 43


>AJ697725-1|CAG26918.1|  153|Anopheles gambiae putative
           odorant-binding protein OBPjj15 protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +1

Query: 55  ILATRHVRLRPDAGYPPPSL 114
           IL  R    R DA YPPP L
Sbjct: 24  ILMVRSDEPRRDANYPPPEL 43


>AF437886-1|AAL84181.1|  153|Anopheles gambiae odorant binding
           protein protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +1

Query: 55  ILATRHVRLRPDAGYPPPSL 114
           IL  R    R DA YPPP L
Sbjct: 24  ILMVRSDEPRRDANYPPPEL 43


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 201 EHGLQRQRLPRAANRCRVRHVAVVDLTF 118
           +H  Q+Q LPR ++   +R    +++TF
Sbjct: 211 QHSDQQQELPRPSSPPAIRRSGTLEVTF 238


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,531
Number of Sequences: 2352
Number of extensions: 13789
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)