Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30577
         (811 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4VEA4 Cluster: Putative uncharacterized protein; n=1; ...    35   2.1  
UniRef50_Q7VRE9 Cluster: Exonuclease V, beta chain; n=1; Candida...    34   4.9  
UniRef50_Q7R7X8 Cluster: Putative uncharacterized protein PY0744...    33   6.4  

>UniRef50_A4VEA4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 116

 Score = 35.1 bits (77), Expect = 2.1
 Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
 Frame = -3

Query: 527 MFLGARYKEKEHLNKYKLKTSTFLKDRKVNQILFCY--KYLHRNACYFF-TYVVLS 369
           M+  +   E E  +KY+L  S F   + + QILFCY  KY  +  C+FF  Y+ LS
Sbjct: 59  MYFFSSCYEVEFYSKYQL--SFFYSKKLIEQILFCYFFKYYEQVICFFFWKYLSLS 112


>UniRef50_Q7VRE9 Cluster: Exonuclease V, beta chain; n=1; Candidatus
           Blochmannia floridanus|Rep: Exonuclease V, beta chain -
           Blochmannia floridanus
          Length = 1208

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
 Frame = +1

Query: 550 ININWKVAPFIKMALGNPFQEDSIP*VFNLINF--SLTTKIKNRGIFL---KLQSPLELW 714
           +NINW+ +P +  A+   FQ  + P VF  I+F  S+ +   N+  FL   +LQSPL  W
Sbjct: 447 LNINWRSSPGMVNAINQLFQVPN-PFVFKDISFIPSIPSYKNNKHQFLIHNQLQSPLCFW 505

Query: 715 NFS 723
            +S
Sbjct: 506 LYS 508


>UniRef50_Q7R7X8 Cluster: Putative uncharacterized protein PY07449;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY07449 - Plasmodium yoelii
           yoelii
          Length = 1111

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 206 SKYVFNTIIAIKIIENPIGKYDRTYYFFSEFLYFCN-YVIGSLLFF 72
           ++Y+    I  KI+   I  YD   Y + ++LYFCN Y    LL F
Sbjct: 465 NRYLIKENILNKILLICINNYDEKIYKYMKYLYFCNFYFYNPLLIF 510


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,266,733
Number of Sequences: 1657284
Number of extensions: 14451442
Number of successful extensions: 33509
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33498
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69966202150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)