Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30577
         (811 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.94 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.8  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = -3

Query: 242 AVRNLKLNKYYQSKYVFNTIIAIKIIENPIGKYDRTYYFFSEFLYFCNYVIGSLLFFGCI 63
           +  ++K  KY +    F   I +  I   I K    Y F  +  YF   V+  LL  GCI
Sbjct: 13  STHSMKNFKYLKVLVTFAHFICLFPITINIRKNGLNYNFTKK-CYFLRMVLIDLLIVGCI 71

Query: 62  I 60
           +
Sbjct: 72  L 72


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 529  YRICINSININWKV 570
            Y IC N I   WKV
Sbjct: 2105 YEICTNVIKKGWKV 2118


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 239 VRNLKLNKYYQSKYVFNTIIAIKIIENPI 153
           V +L++ KYY   Y    ++ +    NPI
Sbjct: 321 VYHLEIEKYYNILYFCRIMVYLNSAINPI 349


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 460  NVLVLSLYLLRCSFSLY 510
            NVL+  +YL  C F +Y
Sbjct: 1126 NVLLNCVYLFLCGFCVY 1142


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,420
Number of Sequences: 336
Number of extensions: 4151
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)