Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30577
         (811 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    27   0.52 
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    23   8.4  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   8.4  

>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 27.5 bits (58), Expect = 0.52
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = -3

Query: 236 RNLKLNKYYQSKYVFNTIIAIKIIENPIGKYDRTYYFFSEFLYFCNYVIGSLLFFG 69
           R + L K      V   ++ I+ I    G   + Y F+  F YFC  V+   + FG
Sbjct: 19  RTMVLPKLKDETAVMPFLLQIQTIAGLWGDRSQRYRFYLIFSYFCAMVVLPKVLFG 74


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +1

Query: 496 SFSLYLAPRNIYRICINSININWKVAPFIKMALGNPFQEDSI 621
           +F+ YL PR  YR  ++  N+ W+  PF     G  + + ++
Sbjct: 96  AFNEYL-PRG-YRTELSRFNLKWQPMPFSSKPFGIYYNKGAV 135


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +1

Query: 496 SFSLYLAPRNIYRICINSININWKVAPFIKMALGNPFQEDSI 621
           +F+ YL PR  YR  ++  N+ W+  PF     G  + + ++
Sbjct: 96  AFNEYL-PRG-YRTELSRFNLKWQPMPFSSKPFGIYYNKGAV 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,339
Number of Sequences: 2352
Number of extensions: 14733
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)