Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30575
         (705 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2125|AAG22427.2|  398|Drosophila melanogaster CG18789-P...    42   6e-04

>AE014134-2125|AAG22427.2|  398|Drosophila melanogaster CG18789-PA
           protein.
          Length = 398

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = +2

Query: 38  KQNDTQASPFQLNISQQNMDTNTFQKSNTQQSFFGKNVPSVE-QSGVYSKMEELTPDDLE 214
           +Q   Q    Q  + QQ       Q+    Q    +  P+ E QS VYS+ME+L   ++E
Sbjct: 317 QQMHQQQQMQQQQMQQQQQQFQMQQQQQMMQQQQQQAQPTNEIQSSVYSRMEDLNEQEIE 376

Query: 215 AFKSDKFQLGFVPE*HHPKSY 277
           AFK+D+F  G +P    P+++
Sbjct: 377 AFKADQFLPGALPFKPPPRNF 397


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,551,535
Number of Sequences: 53049
Number of extensions: 607429
Number of successful extensions: 982
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)