Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30574
(641 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41266| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.021
SB_16949| Best HMM Match : DUF1174 (HMM E-Value=0.08) 33 0.20
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_26383| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_25340| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_57004| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_25539| Best HMM Match : TP2 (HMM E-Value=6.5) 30 1.8
SB_56787| Best HMM Match : Keratin_B2 (HMM E-Value=0.34) 29 2.4
SB_21467| Best HMM Match : Peptidase_A17 (HMM E-Value=1.1e-22) 29 2.4
SB_57005| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_6398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_9239| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_54333| Best HMM Match : Glyco_hydro_39 (HMM E-Value=0) 29 4.2
SB_29755| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_29312| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_30264| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_7587| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-13) 28 5.6
SB_52574| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_8305| Best HMM Match : Plasmodium_HRP (HMM E-Value=8.8) 28 7.4
SB_424| Best HMM Match : AT_hook (HMM E-Value=0.63) 28 7.4
SB_58636| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_53747| Best HMM Match : S1-P1_nuclease (HMM E-Value=2.9) 28 7.4
SB_25210| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_13196| Best HMM Match : VSP (HMM E-Value=1.4) 28 7.4
SB_56170| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_3417| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_7065| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
>SB_41266| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 36.3 bits (80), Expect = 0.021
Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 3/114 (2%)
Frame = +1
Query: 280 NNRKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYITTSEDINNRTTSEDIN 459
NNR T + T + H++Q+ T + S T T E +NNR T E +N
Sbjct: 163 NNRDTRDPVNNRDTRDPRHPRHSQQTETPETQSTTETSETQSSTDTREPVNNRDTRETVN 222
Query: 460 DRTISQKRPEFNIIFGFIERTRSPSVNDRNV---VRSSTDRKIINKTDIKNVTN 612
+R + R +N+R+ V + R IN D ++ N
Sbjct: 223 NRDTRDTVNNRDTRDPVNNRDTQDPINNRDTRDPVNNRDTRDPINNRDTRDTVN 276
Score = 29.5 bits (63), Expect = 2.4
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +1
Query: 316 KTFSTQSETHTKQSHTEHSSIKHVHSGTHKYITTSEDINNRTTSEDINDRTISQKRPEFN 495
+T TQS T T ++ S+I T T + +NNR T + IN+R + P N
Sbjct: 74 ETPETQSTTDTPETQ---STITTETPETQSTTDTRDPVNNRDTRDPINNR--DTRDPVNN 128
Query: 496 IIFGFIERTRSPSVND--RNVVRSSTDRKIINKTDIKNVTN 612
TR P N R+ V ++ R +N D ++ N
Sbjct: 129 ------TDTRDPVNNSYTRDTVNNTDTRDPVNNNDTRDPVN 163
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 415 TSEDINNRTTSEDINDR-TISQKRPEFNIIFGFIERTRSPSVNDRNVVRSSTD-RKIINK 588
T + +NNR T + +N+R T + P + E + S + + +SSTD R+ +N
Sbjct: 158 TRDPVNNRDTRDPVNNRDTRDPRHPRHS---QQTETPETQSTTETSETQSSTDTREPVNN 214
Query: 589 TDIKNVTN 612
D + N
Sbjct: 215 RDTRETVN 222
>SB_16949| Best HMM Match : DUF1174 (HMM E-Value=0.08)
Length = 349
Score = 33.1 bits (72), Expect = 0.20
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = +1
Query: 280 NNRKTTAI---HQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYITTSEDINNRTTSE 450
+N +TT+I H N ++ + H T SI H + I+TS N+RTTS
Sbjct: 170 SNDRTTSISITHPSNDRTNSTNIIHPSNDSTTSISITHSGNDRTTSISTSHPGNDRTTSI 229
Query: 451 DI----NDRTISQKRP 486
I NDRT S P
Sbjct: 230 SITHPSNDRTTSIASP 245
Score = 31.9 bits (69), Expect = 0.46
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 7/122 (5%)
Frame = +1
Query: 280 NNRKTTAI---HQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYITTSEDINNRTTSE 450
+N +TT+I H N + ++ S TH T SI H + I+ + N+RTTS
Sbjct: 105 SNDRTTSINITHPSNDSTTSISITHPGNDRTTSISITHPGNDNTCSISITHPGNDRTTSI 164
Query: 451 DI----NDRTISQKRPEFNIIFGFIERTRSPSVNDRNVVRSSTDRKIINKTDIKNVTNVS 618
I NDRT S +I +RT S ++ + ST I + T++S
Sbjct: 165 SITHPSNDRTTS-----ISITHPSNDRTNSTNIIHPS--NDSTTSISITHSGNDRTTSIS 217
Query: 619 TS 624
TS
Sbjct: 218 TS 219
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Frame = +1
Query: 283 NRKTTAI---HQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYITTSEDINNRTTSED 453
N +TT+I H N ++ S TH T ++I H + + I+ + N+RTTS
Sbjct: 158 NDRTTSISITHPSNDRTTSISITHPSNDRTNSTNIIHPSNDSTTSISITHSGNDRTTSIS 217
Query: 454 I----NDRTIS 474
NDRT S
Sbjct: 218 TSHPGNDRTTS 228
Score = 29.1 bits (62), Expect = 3.2
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 12/127 (9%)
Frame = +1
Query: 280 NNRKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYITTSEDINNRTTSEDI- 456
N + H N + S TH T +I H + + I+ + N+RTTS I
Sbjct: 82 NTCSISITHPGNDRTISISITHPSNDRTTSINITHPSNDSTTSISITHPGNDRTTSISIT 141
Query: 457 ---NDRTISQKRPEFNIIFGFIERTRSPSV----NDR----NVVRSSTDRKIINKTDIKN 603
ND T S +I +RT S S+ NDR ++ S DR N T+I +
Sbjct: 142 HPGNDNTCS-----ISITHPGNDRTTSISITHPSNDRTTSISITHPSNDR--TNSTNIIH 194
Query: 604 VTNVSTS 624
+N ST+
Sbjct: 195 PSNDSTT 201
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +1
Query: 283 NRKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYITTSEDINNRTTSE 450
+R+ + H+D K+ S +K+ H+ H S HS + K +S+D ++R+ SE
Sbjct: 794 DRRDSKGHRDEKSRSRDDTHRSKKEHSRHGS----HSDSDKDRRSSKDSHSRSHSE 845
>SB_26383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1142
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 403 KYITTSEDINNRTTSEDINDRTISQKRPEFNIIFGFIERTRSPSVNDRNVVRSSTDRKI- 579
K + + + SED D ++K+PE F ++RTR + D +V +T R +
Sbjct: 723 KVANGAPSVADNKASEDAKDG--AEKKPEGEKHFKTLKRTRKFANQDGQIVTETTSRVVD 780
Query: 580 INKTDIKNVTNVSTSVKKTN 639
++ D KN + +K N
Sbjct: 781 VSGEDYKNALIKAQMQRKVN 800
>SB_25340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1105
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +1
Query: 283 NRKTTAIHQDNKTFSTQSETHTKQSHTEHSS--IKHVHSGTHKYITTSEDINN 435
NR+ A DN+ F +E + S +KH HS H+Y S +N
Sbjct: 239 NRREQARGLDNEGFEGDNEVENASRRNRNGSRGLKHAHSDVHEYRVKSPPYSN 291
>SB_57004| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 286 RKTTAIHQDNKTFSTQSETH--TKQSHTEHSSIKHVHSGTHKYITTSEDINNRTTSEDIN 459
+ T A+H T TQ+ H K +HT HS+ + + + TH + + + T+ N
Sbjct: 72 KHTHAMHLKTCTLCTQTHAHFALKHTHTMHSNTRTLCTQTHAH----NALKHTHTTMHSN 127
Query: 460 DRTI-SQKRPEFNIIF 504
RT+ +Q P + + F
Sbjct: 128 KRTLCTQTHPLYAVRF 143
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 8/40 (20%)
Frame = +1
Query: 298 AIHQDNKTFSTQSETH--TKQSHT------EHSSIKHVHS 393
A+H + +TF TQ+ H K +HT H+++KH H+
Sbjct: 37 AMHSNTRTFCTQTHAHYALKHTHTLCTQTHAHNALKHTHA 76
>SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 29.9 bits (64), Expect = 1.8
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +1
Query: 316 KTFSTQSETHTKQSHTEHSSIKHVHSGTHKYITTSEDINNRTTSEDINDRTISQKRPEFN 495
+T TQS T T ++ S+I T T + +NNR T + IN+R + P N
Sbjct: 74 ETPETQSTTDTPETQ---STITTETPETQSTTDTRDPVNNRDTRDPINNR--DTRDPVNN 128
Query: 496 IIFGFIERTRSPSVND--RNVVRSSTDRKIINKTDIKNVTN 612
TR P N R+ V ++ +R +N D ++ N
Sbjct: 129 ------TDTRDPVNNSYTRDTVNNTDNRDPVNNRDTRDPVN 163
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 29.9 bits (64), Expect = 1.8
Identities = 26/102 (25%), Positives = 48/102 (47%)
Frame = +1
Query: 274 QFNNRKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYITTSEDINNRTTSED 453
Q +++KT +D+K +++ +Q TE S I HS T I + + T D
Sbjct: 2824 QGDDKKTRGTREDDKERRKENKPALQQKETEISKICAAHSETVSAIFNAARRASLTPRND 2883
Query: 454 INDRTISQKRPEFNIIFGFIERTRSPSVNDRNVVRSSTDRKI 579
++ S++R + + ++ T+ P D N V STD ++
Sbjct: 2884 SDESDSSKERVDLDPKNTGLKYTK-PLRKDNNKV--STDHEL 2922
>SB_25539| Best HMM Match : TP2 (HMM E-Value=6.5)
Length = 150
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +2
Query: 11 RSRSPTRYTPGETPSQIRPKDNLRPEGDFDRPDTQKWVPSEKSGTFRPKDNITR 172
RS PT T + + P RPE R TQ V + GTFR + R
Sbjct: 23 RSSWPTYATKSSPNTPLLPHSRSRPEERLTRRATQGRVRETQEGTFREVQQVER 76
>SB_56787| Best HMM Match : Keratin_B2 (HMM E-Value=0.34)
Length = 527
Score = 29.5 bits (63), Expect = 2.4
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
Frame = +1
Query: 283 NRKTTAIHQDNKTFSTQSETHTKQS--HTEHSSIKHV----HSG-----THKYITTSEDI 429
++K +AI + N + ++ HT Q+ HT S+ V H+ +HKY+T + D
Sbjct: 185 HKKISAIQEKNPSHKSKIR-HTSQNIRHTSQRSVTQVKDPSHNSEIRHTSHKYVTQARDP 243
Query: 430 NNRTTSEDINDRTISQKRPEFNIIFGFIERTRSPSVNDRNVVRSSTDRKIINKTDIKNVT 609
++ + + R+I+Q + I + +S R+V +S R + + ++VT
Sbjct: 244 SHNSKIRHTSQRSITQFKDSRRDRNLKIYQYQSTLTTSRHVTITSGSRHVTITSRSRHVT 303
Query: 610 NVS 618
S
Sbjct: 304 ITS 306
>SB_21467| Best HMM Match : Peptidase_A17 (HMM E-Value=1.1e-22)
Length = 1043
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +2
Query: 59 IRPKDNLRPEGDF----DRPDTQKWVPSEKSGTFRPKDNITRNGEIIREDSYKSSEGVKK 226
IRP+ NL + D+ KW + + + +DN+ R ++ D Y SS+G K+
Sbjct: 962 IRPRRNLEQDDIVLIKEDKVPRNKWRLARVTSVIQDEDNLVRKVRVVVGDPYLSSKG-KR 1020
Query: 227 IVGSKII 247
+ + ++
Sbjct: 1021 LEAATVL 1027
>SB_57005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 286 RKTTAIHQDNKTFSTQSETH--TKQSHTEHSSIKHVHSGTHKY 408
+ T A+H + +T TQ+ H K +H HS+ + + + TH +
Sbjct: 191 KHTHAMHLNTRTLCTQTHAHCALKHTHAMHSNTRTLCTETHAH 233
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 292 TTAIHQDNKTFSTQSETH--TKQSHTEHSSIKHVHSGTH-----KYITTSEDINNRT 441
T A+H + +T TQ+ K +HT HS+ + + + TH K+ T+ N RT
Sbjct: 76 THAMHSNTRTLCTQTHARYALKHTHTMHSNTRTLCTKTHARYALKHTHTTMHSNTRT 132
>SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 286 RKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVH-SGTHKYITTSEDINNRTT 444
R T +H + +T+ +TH +HT ++ H TH + TT D + T
Sbjct: 415 RHDTHLHDTHPHETTRHDTHLHDTHTHETTRHDTHLHDTHTHETTRHDTHLHDT 468
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 286 RKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVH-SGTHKYITTSEDINNRTTSED 453
R T +H + +T+ +TH +HT ++ H H + TT D + T+E+
Sbjct: 475 RHDTHLHDTHTHETTRHDTHLYDTHTHETTRHDTHLHDMHTHETTRHDTHLHDTTEN 531
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 286 RKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVH-SGTHKYITTSED 426
R T +H + +T+ +TH +HT ++ H TH + TT D
Sbjct: 445 RHDTHLHDTHTHETTRHDTHLHDTHTHETTRHDTHLHDTHTHETTRHD 492
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 286 RKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVH-SGTHKYITTSED 426
R T +H + +T+ +TH +HT ++ H TH + TT D
Sbjct: 460 RHDTHLHDTHTHETTRHDTHLHDTHTHETTRHDTHLYDTHTHETTRHD 507
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 310 DNKTFSTQSETHTKQSHTEHSSIKHVH-SGTHKYITTSEDINNRTT 444
D +ST + TH +HT + H TH + TT D + T
Sbjct: 393 DTTRYSTHTHTHLHDTHTHETPRHDTHLHDTHPHETTRHDTHLHDT 438
>SB_6398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 29.1 bits (62), Expect = 3.2
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 4/115 (3%)
Frame = +1
Query: 280 NNRKTT-AIHQDNK-TFSTQSETHTKQSHTEHSSIKHVHSGTHKYITTSEDINNRTTSED 453
NNR ++ +N+ T T ET + + E S T T + +NNR T +
Sbjct: 79 NNRDARDPVNNNNRDTRDTTPETQSTTATPETQSTTQTPE-TQSTTDTRDTVNNRDTRDP 137
Query: 454 INDRTISQKRPEFNIIFGFIERTRSPSVN--DRNVVRSSTDRKIINKTDIKNVTN 612
+N+R R N TR P N R+ V + R +N DI++ N
Sbjct: 138 VNNR---DTRDAVN-----NRDTRDPVNNRDTRDPVNNRDTRDTVNNRDIRDTVN 184
>SB_9239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/77 (19%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 277 FNNRKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHK-YITTSEDINNRTT-SE 450
+NN T + +++ QS + S + VH+ T K + + +NN+T+ +
Sbjct: 17 YNNNHTLKQPYNQQSYKQQSYSQQSYSQKSYGQQSTVHNQTSKNHTVKNRTVNNQTSKNH 76
Query: 451 DINDRTISQKRPEFNII 501
+ +RT++ ++ +
Sbjct: 77 TVKNRTVNNLTVKYRTV 93
>SB_54333| Best HMM Match : Glyco_hydro_39 (HMM E-Value=0)
Length = 1325
Score = 28.7 bits (61), Expect = 4.2
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 10/105 (9%)
Frame = +1
Query: 301 IHQDNKT------FSTQSETHTKQSHTEHSSIKHVHSGTHKYITTSEDINNRTTSEDIND 462
+H D +T +ST+ T T+ H ++I V + H Y + S I T +N
Sbjct: 755 LHHDTRTTCKYDSYSTRIYTTTRVRHVNTTAIPRVSTPRHAYDSYSTRIYTTTRVRQVNT 814
Query: 463 RTISQKRPEFNIIFGFIER----TRSPSVNDRNVVRSSTDRKIIN 585
I + + + R TR VN + R ST R + +
Sbjct: 815 TAIPRVSTPRHAYDSYSTRIYTTTRVRHVNTTAIPRVSTPRHLFH 859
>SB_29755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/110 (19%), Positives = 48/110 (43%)
Frame = +1
Query: 280 NNRKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYITTSEDINNRTTSEDIN 459
N R T A+ +D + + ++ E + V T + +R ++ +
Sbjct: 23 NRRITKALLEDRRVTKALEDRRITKALLED---RRVTKALEDRRITKALLEDRRVTKALE 79
Query: 460 DRTISQKRPEFNIIFGFIERTRSPSVNDRNVVRSSTDRKIINKTDIKNVT 609
DR I+++ + +R + ++ DR+V ++ DR+I + ++VT
Sbjct: 80 DRRITKELEGRRVTKALEDRHVTKALEDRHVTKALEDRRISKALEDRHVT 129
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/51 (23%), Positives = 29/51 (56%)
Frame = +1
Query: 427 INNRTTSEDINDRTISQKRPEFNIIFGFIERTRSPSVNDRNVVRSSTDRKI 579
+ +R ++ + DR IS+ + ++ +R + ++ DR+V ++ DR+I
Sbjct: 105 LEDRHVTKALEDRRISKALEDRHVTKALEDRNVTKALEDRHVTKALEDRRI 155
>SB_29312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 14 SRSPTRYTPGETPSQIRPKDNLRPEGDFDRPDTQKWVPSEKSGTFRPKDNITRNGEIIRE 193
S+S Y +T +RP + R +T + SE K+N+ + ++R+
Sbjct: 4 SKSQRNYVKADTEELVRPATKTVKKHSVVRRNTDPILASEAIQALSAKENLAKASAMLRK 63
Query: 194 DSYKSSEGV 220
+ K++EG+
Sbjct: 64 TA-KNTEGI 71
>SB_30264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 689
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 381 TCSLWDP*IYHYVRGYKQSHHVRRYKRSHNFTK 479
TC + + +YHY+ + HH+ R H F K
Sbjct: 318 TCKVMEHIVYHYIYAHLDRHHILR-DFQHGFRK 349
>SB_7587| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-13)
Length = 351
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 426 YKQSHHVRRYKRSHNFTKTTRIQHHLRIH 512
YKQS H+RR++RSH + + + R H
Sbjct: 236 YKQSGHMRRHERSHEHGHSDKGKSDTRHH 264
>SB_52574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 298
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +1
Query: 355 SHTEHSSIKHVHSGTHKYITTSEDINNRTTSEDIN--DRTISQKRPEFNIIFGFIERTRS 528
S TE + + + T + S +I+N+++ D + + +R ++I GF S
Sbjct: 162 SSTEEDNNSNSDTSTGVHTEHSSEIDNQSSQSDSESAEDNVEHRRSSLDVITGFFSGLTS 221
Query: 529 PSVN-DRNVVRSSTDRKIINKTDIKNVTNVS 618
S + DR +T K + I + T S
Sbjct: 222 SSTDPDRGTESENTHDKSPGQESIPDDTKQS 252
>SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2103
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +1
Query: 301 IHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYITTSE---DINNRTTSEDINDRT 468
IH D + T E H + + S K +H T + T+ E DI TS++I++ T
Sbjct: 1878 IHGDTGYYHTSKEIHGDTGYYDTS--KEIHGDTGHHHTSKEIHGDIGRYDTSKEIHEDT 1934
>SB_8305| Best HMM Match : Plasmodium_HRP (HMM E-Value=8.8)
Length = 366
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 280 NNRKTTAIHQDNKTFSTQSET-HTKQSHTEHSSIKHVHSGTHKYITTSEDINNRTT 444
NN+ T Q+ + T + T HT Q H + ++ + + T + S + NN+TT
Sbjct: 153 NNQTTHTTQQNKQPNDTYNPTTHTTQLHKQPNNTNNQTTHTTQQHIQSNNTNNQTT 208
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +1
Query: 292 TTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYITTSEDINNRTT 444
TT +H+ + Q+ THT Q H + ++ + + T + + NN+TT
Sbjct: 176 TTQLHKQPNNTNNQT-THTTQQHIQSNNTNNQTTQTTQQHIQPNNTNNQTT 225
Score = 27.5 bits (58), Expect = 9.8
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = +1
Query: 286 RKTTAIH-QDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYITTSEDINNRTTSEDIND 462
++TT H Q N T++ ++T TK+ H +H+ K + TH TT + I T+
Sbjct: 106 KQTTQRHIQPNNTYNPTTQT-TKR-HIQHN--KTNNQTTH---TTQQHIQPNNTNNQTTH 158
Query: 463 RTISQKRPE--FNIIFGFIERTRSPSVNDRNVVRSSTDRKIINKTDIKNVTNVST 621
T K+P +N + + P N+ N + T ++ I + N T +T
Sbjct: 159 TTQQNKQPNDTYNPTTHTTQLHKQP--NNTNNQTTHTTQQHIQSNNTNNQTTQTT 211
>SB_424| Best HMM Match : AT_hook (HMM E-Value=0.63)
Length = 201
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 397 THKYITTSEDINNRTTSEDINDRTI 471
TH I + + +N TT ED+ND +
Sbjct: 88 THNNIMSKNEESNATTKEDVNDNAV 112
>SB_58636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 283 NRKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHK 405
+R TA H+ K ++ + TH +SH S + V S TH+
Sbjct: 29 HRSVTATHRKEKRLTSLTHTHAGRSHAVTSLHRSV-SATHR 68
>SB_53747| Best HMM Match : S1-P1_nuclease (HMM E-Value=2.9)
Length = 554
Score = 27.9 bits (59), Expect = 7.4
Identities = 23/89 (25%), Positives = 33/89 (37%)
Frame = +1
Query: 328 TQSETHTKQSHTEHSSIKHVHSGTHKYITTSEDINNRTTSEDINDRTISQKRPEFNIIFG 507
T + T T + TE + + + TT+ N TS T S K EF
Sbjct: 468 TSASTTTTTTSTETNEVTSASTTA----TTTSTKTNEVTSASTTATTTSTKTNEFTSAST 523
Query: 508 FIERTRSPSVNDRNVVRSSTDRKIINKTD 594
+ T S ND + ++T KTD
Sbjct: 524 ALTTTSSAKTNDGSSAFTTTTTTTSAKTD 552
>SB_25210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 417 VRGYKQSHHVRRYKRSHNFTKTTRIQHHLRIH 512
VR Y + H+VR + R HN R+ H++R+H
Sbjct: 44 VRVYVRMHNVRVHVRMHNVRVHVRM-HNVRVH 74
>SB_13196| Best HMM Match : VSP (HMM E-Value=1.4)
Length = 500
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +1
Query: 304 HQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYITTSEDINNRT----TSEDINDRTI 471
H T + H K EHS +H+ + TH++ SED + +T SED + RT
Sbjct: 299 HMKTCTHEQSEDGHMKTCTHEHSEDRHMKTCTHEH---SEDGHMKTCTHEQSEDGHMRTC 355
Query: 472 SQKRPE 489
+ + E
Sbjct: 356 THEHSE 361
>SB_56170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -2
Query: 103 TIKIAFRSQVIFRSNLRR--CFTWSVSCRRTRSY 8
T + RS I RSNLRR W C R RS+
Sbjct: 83 TTETTLRSVAIVRSNLRRSCAIIWKPLCDRLRSH 116
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 27.5 bits (58), Expect = 9.8
Identities = 26/132 (19%), Positives = 51/132 (38%)
Frame = +1
Query: 223 KNCRFXXXXXXXXXXXXQFNNRKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTH 402
KNC NN ++ ++ N + + + ++ ++ + +S +
Sbjct: 1708 KNCSSNNSDNNSIINNNSINNNNSSINNRSNNHNNNNNSINNCNNNNSINNRNNNNSINN 1767
Query: 403 KYITTSEDINNRTTSEDINDRTISQKRPEFNIIFGFIERTRSPSVNDRNVVRSSTDRKII 582
+ T + INN +S IN+ S +II + S+N+ N ++ + II
Sbjct: 1768 RNNTNNNSINNNNSS--INNNNSSINNNNSSII------NNNSSINNNNSSINNNNSSII 1819
Query: 583 NKTDIKNVTNVS 618
N N N S
Sbjct: 1820 NNNSSNNNNNSS 1831
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 27.5 bits (58), Expect = 9.8
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Frame = +1
Query: 280 NNRKTTAIHQDNKTFSTQSETHTKQSHTEHS-SIK-HV--HSGTHKYITTSEDINNRT-- 441
N R A +NKT TQ++ K T+H +IK HV H T K + + NN+
Sbjct: 500 NKRACHATPDNNKTHVTQNQVTIKGHVTQHQITIKGHVTQHQVTIKKVCHATQDNNKRAC 559
Query: 442 -TSEDINDR 465
+ DIN R
Sbjct: 560 HATPDINKR 568
>SB_3417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +3
Query: 432 QSHHVRRYKRSHNFTKTTRIQHH---LRIH*ENSITK 533
++H+ R+HN TRI +H RIH N +T+
Sbjct: 157 RAHNHNMVTRTHNHNMVTRIHNHNMVTRIHNHNMVTR 193
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +1
Query: 280 NNRKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKY 408
NN TTAI + Q + Q H +H H H H+Y
Sbjct: 265 NNNNTTAITTTQQQQQQQQQQQQHQLHQQHQ--LHQHQQQHQY 305
>SB_7065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 415 TSEDINNRTTSEDINDRTISQKRPEFNIIFGFIERTRSPSVND--RNVVRSSTDRKIINK 588
T + +NNR T + +NDR + P N TR P N+ R+ V +S R +N
Sbjct: 3 TRDPVNNRDTRDPVNDR--DTRDPVNN------RDTRDPVNNNDTRDSVTNSDTRDSVNN 54
Query: 589 TDIKNVTN 612
D ++ N
Sbjct: 55 RDTRDPVN 62
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,073,203
Number of Sequences: 59808
Number of extensions: 321027
Number of successful extensions: 1359
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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