Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30573
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.6  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   3.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   3.4  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   4.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   6.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   6.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.9  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 499 SGWSREYSPFTTSPSRVSCWDL 434
           S WS   +P T     ++CW L
Sbjct: 305 STWSTVQTPTTVMSPTINCWSL 326


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = -1

Query: 334 AAWCTTGACCTGLKCWTTGEACIYEECPR 248
           A W ++   CT   C      C   ECP+
Sbjct: 684 AQWTSSDNPCTTCFCENGNNKCFTMECPQ 712


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 361 IMSKIMLPRSMSSHIPSRIPTPAITSPNTKP 453
           ++S   LP + S+   + + T   T P+TKP
Sbjct: 155 VISSTPLPPTTSTTTRTTLTTKFTTKPSTKP 185


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -1

Query: 325 CTTGACCTGLKCWTTGEACIYEECPRG 245
           CT     +G+ C T  E C    C  G
Sbjct: 9   CTCPLGFSGINCQTNDEDCTETSCMNG 35


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -2

Query: 429 RRCGDPRRNMRTHTSREHDLRHDRS 355
           R+C D R     H   EHD R   S
Sbjct: 249 RQCDDHRDRPPRHFHEEHDTRRASS 273


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 503 FHRKVEYTADHH 538
           FHR+ E  ADHH
Sbjct: 367 FHREREPVADHH 378


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 227  VLLFTPPPWTFFVYTCFASSPTLQPCATCSS 319
            V  F    W+ F +     +  +  CATCSS
Sbjct: 909  VAAFGLDQWSSFYWNLLPIAVFILVCATCSS 939


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 227  VLLFTPPPWTFFVYTCFASSPTLQPCATCSS 319
            V  F    W+ F +     +  +  CATCSS
Sbjct: 909  VAAFGLDQWSSFYWNLLPIAVFILVCATCSS 939


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 334 RFQLPSNTPIMSKIMLPRSMSSHIPSRIPTPA 429
           R  LP+N       +LP +  ++ P   P P+
Sbjct: 47  RLSLPTNPAFFHPGLLPLAWQANSPPSPPAPS 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,563
Number of Sequences: 336
Number of extensions: 4650
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)