Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30573
(748 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57270| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 37 0.020
SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031) 36 0.035
SB_7305| Best HMM Match : Extensin_2 (HMM E-Value=0.043) 33 0.33
SB_19560| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06) 32 0.43
SB_48450| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_18393| Best HMM Match : RCSD (HMM E-Value=2.6) 32 0.57
SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017) 32 0.57
SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_52135| Best HMM Match : RCSD (HMM E-Value=4.8) 30 1.7
SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33) 30 1.7
SB_58551| Best HMM Match : GLTT (HMM E-Value=5.7e-23) 30 1.7
SB_40909| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_34294| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_46011| Best HMM Match : DNA_ligase_ZBD (HMM E-Value=2.9) 30 2.3
SB_27287| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_11862| Best HMM Match : Homeobox (HMM E-Value=1.1e-16) 29 3.0
SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23) 29 3.0
SB_51497| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_51596| Best HMM Match : DUF652 (HMM E-Value=8.3) 29 4.0
SB_5401| Best HMM Match : DUF652 (HMM E-Value=3) 29 4.0
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_8567| Best HMM Match : EB (HMM E-Value=2.3) 29 4.0
SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0) 29 5.3
SB_14511| Best HMM Match : Keratin_B2 (HMM E-Value=2.2) 29 5.3
SB_25525| Best HMM Match : ABC1 (HMM E-Value=1.19993e-41) 28 7.0
SB_18731| Best HMM Match : DUF1309 (HMM E-Value=2) 28 7.0
SB_50965| Best HMM Match : HEAT (HMM E-Value=1.2e-12) 28 9.2
SB_41867| Best HMM Match : F-box (HMM E-Value=4.5e-08) 28 9.2
SB_41288| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_36327| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_35669| Best HMM Match : CCT (HMM E-Value=9.1) 28 9.2
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_4416| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_58339| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_55599| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_36300| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_33718| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_20140| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_12334| Best HMM Match : 7tm_1 (HMM E-Value=0.35) 28 9.2
SB_4465| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_57270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 38.3 bits (85), Expect = 0.007
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Frame = +3
Query: 255 HSSYI--HASPVVQHFSP--VQHAP-VVHHAAIPIAVEHSDHVEDHAPAKYEFS-YSVE- 413
HS Y H+S VQH SP VQH+P V H+ P V+HS + H+P + S Y+V+
Sbjct: 80 HSPYTAQHSSCTVQH-SPYTVQHSPYTVQHS--PCTVQHSPYTVQHSPCTVQHSPYTVQH 136
Query: 414 DPHTGDH 434
P+T H
Sbjct: 137 SPYTVQH 143
Score = 37.9 bits (84), Expect = 0.009
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Frame = +3
Query: 255 HSSYI--HASPVVQHFSP--VQHAP-VVHHAAIPIAVEHSDHVEDHAPAKYEFS-YSVE- 413
HS Y H+S VQH SP VQH+P V H+ P V+HS + H+P + S Y+V+
Sbjct: 222 HSPYTVQHSSYTVQH-SPYTVQHSPYTVQHS--PYTVQHSSYTVQHSPYTVQHSPYTVQH 278
Query: 414 DPHTGDH 434
P+T H
Sbjct: 279 SPYTVQH 285
Score = 35.9 bits (79), Expect = 0.035
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Frame = +3
Query: 258 SSYIHASPVVQHFSP--VQHAP-VVHHAAIPIAVEHSDHVEDHAPAKYEFS-YSVE-DPH 422
+++I S +SP VQH+P V H+ P V+HS + H+P + S Y+V+ P+
Sbjct: 26 TAHIQYSTAHTQYSPYTVQHSPYTVQHS--PYTVQHSSYTVQHSPYTVQHSPYTVQHSPY 83
Query: 423 TGDHKS 440
T H S
Sbjct: 84 TAQHSS 89
Score = 35.9 bits (79), Expect = 0.035
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Frame = +3
Query: 216 STCRSYCSRRPRGHSSYIHASPVVQHF--SP--VQHAP-VVHHAAIPIAVEHSDHVEDHA 380
ST + S R HS+ +H H SP VQH+P V H+ P V+HS + H+
Sbjct: 181 STAQPIYSTAHRQHST-VHTRNSTAHIQHSPYTVQHSPYTVQHS--PYTVQHSSYTVQHS 237
Query: 381 PAKYEFS-YSVE-DPHTGDHKS 440
P + S Y+V+ P+T H S
Sbjct: 238 PYTVQHSPYTVQHSPYTVQHSS 259
Score = 35.9 bits (79), Expect = 0.035
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Frame = +3
Query: 255 HSSYI--HASPVVQHFSP--VQHAP-VVHHAAIPIAVEHSDHVEDHAPAKYEFS-YSVE- 413
HS Y H+ VQH SP VQH+P V H+ P V+HS + H+P + S Y+V+
Sbjct: 313 HSPYTVQHSPYTVQH-SPYTVQHSPYTVQHS--PYTVQHSQYTVQHSPYTVQHSPYTVQH 369
Query: 414 DPHTGDH 434
P+T H
Sbjct: 370 SPYTVQH 376
Score = 33.9 bits (74), Expect = 0.14
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +3
Query: 255 HSSYI--HASPVVQHFSP--VQHAP-VVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDP 419
HS Y H+ VQH SP VQH+P V H+ P V+HS + + +F YS P
Sbjct: 129 HSPYTVQHSPYTVQH-SPYAVQHSPYTVQHS--PYTVQHSPYTAQPIYSTAQFIYSTAQP 185
Query: 420 HTGDHKSQHET 452
QH T
Sbjct: 186 IYSTAHRQHST 196
Score = 32.3 bits (70), Expect = 0.43
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 12/72 (16%)
Frame = +3
Query: 255 HSSYI--HASPVVQHFSP--VQHAP-VVHHAAI-----PIAVEHSDHVEDHAPAKYEFS- 401
HSSY H+ VQH SP VQH+P H++ P V+HS + H+P + S
Sbjct: 59 HSSYTVQHSPYTVQH-SPYTVQHSPYTAQHSSCTVQHSPYTVQHSPYTVQHSPCTVQHSP 117
Query: 402 YSVE-DPHTGDH 434
Y+V+ P T H
Sbjct: 118 YTVQHSPCTVQH 129
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 36.7 bits (81), Expect = 0.020
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 166 PVLSHAAPVLTHAAPLIQHAGPIVHAAPVDILRIY 270
PV+ H AP++ H P++ H P+V AP+ + +Y
Sbjct: 463 PVVYHQAPLVVHKPPIVYHRPPVVMPAPIYHMPVY 497
Score = 32.3 bits (70), Expect = 0.43
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 103 VSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP 249
V+ I+ H P H ++ H AP+L H P++ H P+V P
Sbjct: 21 VNRPPIIYHPPPE---VYHRPEIVVHRAPILIHRPPIVYHQPPVVVHRP 66
Score = 31.1 bits (67), Expect = 0.99
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 103 VSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP 249
V+ I+ H P H ++ H AP++ H P+I H P++ P
Sbjct: 1517 VNRPPIIYHPPPE---VYHRPDIVVHRAPIVLHRPPIIYHQPPVIVHRP 1562
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 103 VSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHA 243
V SIV H +PS H P++ H PV+ H P + H P++H+
Sbjct: 725 VHRPSIVYH-QPS--VVVHRPPIIYHQPPVMFHQPPPLVHQ-PVLHS 767
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +1
Query: 124 RHDEPSHQA--TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP 249
R D H+A H P++ H PV+ H ++ H PIV P
Sbjct: 1533 RPDIVVHRAPIVLHRPPIIYHQPPVIVHRPAVVYHQPPIVFHQP 1576
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 157 HYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP 249
H P++ H PV+ H ++ H PIV P
Sbjct: 50 HRPPIVYHQPPVVVHRPAVVYHQPPIVFHQP 80
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 169 VLSHAAPVLTHAAPLIQHAGPIVHAAP 249
V+ PV+ H APL+ H PIV+ P
Sbjct: 457 VIVQRPPVVYHQAPLVVHKPPIVYHRP 483
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +1
Query: 124 RHDEPSHQA--TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVDILR 264
R D HQ H V+ H V+ H P++ H P+V P ++R
Sbjct: 554 RPDVVVHQPDYVIHRPSVVYHQPSVVVHRPPIVYHQPPVVFHQPPPMVR 602
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 157 HYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP 249
H ++ H A V+ H P++ H P+V P
Sbjct: 268 HQPSIVYHQASVVIHRPPIVYHQPPVVFHQP 298
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 157 HYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVDIL--RIY 270
H ++ H V+ H P+I H+ P+V P ++ R+Y
Sbjct: 1084 HQPSIVYHQPSVVVHRPPIIYHSPPVVFHQPSPMVNQRVY 1123
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 157 HYTPVLSHAAPVLTHAAPLIQHAGP-IVHAAP 249
H V+ H APV+ H ++ H P +VH P
Sbjct: 1384 HRPSVVLHQAPVVVHRPAVVYHQPPVVVHQPP 1415
>SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031)
Length = 1099
Score = 35.9 bits (79), Expect = 0.035
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 136 PSHQATAHYTPVLSHAAPVLTHAAPLIQHAGP-IVHAAPVDILR 264
PSH H P++ H P++ H PLI H P +VH P+ I R
Sbjct: 953 PSH--LIHRPPIILHRPPLIVHRHPLIFHRPPLLVHRMPIIIRR 994
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 267 IHASPVVQHFSP-VQHAP-VVHHAAIPIAVEHSDHVEDHAP 383
IH P++ H P + H P +VHH + + HS HV H P
Sbjct: 1020 IHRMPILIHHHPWLIHRPAIVHHYGPNLMISHSHHVIHHYP 1060
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 157 HYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP 249
H ++ H AP++ H AP+I H P+V P
Sbjct: 316 HRPDIVVHRAPIMIHRAPIIYHQPPVVVHRP 346
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +1
Query: 82 DEGHGHAVSSQSIVRHDEPS--HQA--TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP 249
D+ + + I+ H P H+ H P++ H AP++ H P+I H IV+ P
Sbjct: 453 DKKNNVIIKRPPIIYHPPPEIFHRPDIVVHRAPLMVHRAPIIYHQPPVIVHRPAIVYHQP 512
Score = 32.3 bits (70), Expect = 0.43
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 157 HYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP 249
H P++ H AP++ H P++ H IV+ P
Sbjct: 323 HRAPIMIHRAPIIYHQPPVVVHRPAIVYHQP 353
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 157 HYTPVLSHAAPVLTHAAPLIQHAGPIV-HAAPVDILR 264
H P + H ++ H AP++ H PI+ H PV + R
Sbjct: 309 HPPPEIYHRPDIVVHRAPIMIHRAPIIYHQPPVVVHR 345
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 157 HYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP 249
H ++ H AP++ + AP+I H P+V P
Sbjct: 691 HRPDIIVHRAPIVLYRAPIIYHQPPVVVHRP 721
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Frame = +1
Query: 97 HAVSSQSIVRHDEP----SHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP 249
H + I+ H P H H P+L H P++ PL+ H P++ P
Sbjct: 955 HLIHRPPIILHRPPLIVHRHPLIFHRPPLLVHRMPIIIRRPPLLIHRMPLIVHRP 1009
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 157 HYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP 249
H P++ H PV+ H ++ H PI+ P
Sbjct: 173 HRPPIIYHQPPVIVHRPAVVYHQPPIIFHQP 203
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 157 HYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVDILR 264
H P++ H PV+ H ++ H IV P ++R
Sbjct: 330 HRAPIIYHQPPVVVHRPAIVYHQPSIVFHQPPPVVR 365
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 115 SIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIV-HAAPVDILR 264
S+V H P H P + H ++ H AP++ + PI+ H PV + R
Sbjct: 673 SVVIHRPP---IIYHPPPEIYHRPDIIVHRAPIVLYRAPIIYHQPPVVVHR 720
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +1
Query: 103 VSSQSIVRHDEPS--HQA--TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP 249
V+ I+ H P H+ H P++ H P++ H P+I H +V+ P
Sbjct: 144 VNRPPIIYHPPPEIYHRPDIVVHRPPLVIHRPPIIYHQPPVIVHRPAVVYHQP 196
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 109 SQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPI-VHAAPV 252
++S E + P++ H P + H ++ H PI +H AP+
Sbjct: 286 TKSKTEKGEKKNSVVIRRPPIIYHPPPEIYHRPDIVVHRAPIMIHRAPI 334
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 157 HYTPVLSHAAPVLTHAAPLIQHAGP-IVHAAPV 252
H P+L H L H P+I H P IVH P+
Sbjct: 944 HRPPILFHPPSHLIHRPPIILHRPPLIVHRHPL 976
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 157 HYTPVLSHAAPVLTHAAPLIQHAGPIVH 240
H P++ H P+L H P + H IVH
Sbjct: 1014 HRPPLIIHRMPILIHHHPWLIHRPAIVH 1041
>SB_7305| Best HMM Match : Extensin_2 (HMM E-Value=0.043)
Length = 908
Score = 32.7 bits (71), Expect = 0.33
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +1
Query: 97 HAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVDILRIYML 276
H + + +R+ PS+ T + P+ P T ++H + ++ P + L + +
Sbjct: 755 HTLKYLTTLRYSGPSN--TPLHFPIPDPRKPRYTSLFRTLEHLTTLRYSTPSNTLLYFAI 812
Query: 277 R--Q*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLPRS 390
+ + ++L + L+ TTLR+ PSNT + I PR+
Sbjct: 813 PHPRTPHYTSLFHTLEHLTTLRYSGPSNTSLHFAIPHPRT 852
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/63 (22%), Positives = 28/63 (44%)
Frame = +3
Query: 264 YIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQ 443
Y S + HF+ + H + H+ ++ ++H P+K +++ DP T + S
Sbjct: 695 YFGPSNTLLHFA-IPHPQIPHYTSLFRTLKHPTTFPYSGPSKTSLHFAISDPRTPYYTSL 753
Query: 444 HET 452
T
Sbjct: 754 FHT 756
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 295 SALCNMLQSCTTLRFQLPSNTPIMSKIMLPR 387
++L + L+ TTLR+ PSNTP+ I PR
Sbjct: 751 TSLFHTLKYLTTLRYSGPSNTPLHFPIPDPR 781
>SB_19560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 32.3 bits (70), Expect = 0.43
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 157 HYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVDILRIYMLRQ*SN 291
H P L H P+L H P++ H P++ I ++Y + Q N
Sbjct: 80 HTRPTLGHTRPMLGHTRPMLGHTHPLLGHTCRLIAKVYSVGQNCN 124
>SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06)
Length = 998
Score = 32.3 bits (70), Expect = 0.43
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -2
Query: 552 ALNPLWWSAVYSTLRW-NHQAGVESIRLSRHHHHGFRVGTCDRRCGDPRRNMRTHTSREH 376
A + ++W Y+ +R +H A I L++ G+ +RR RR ++HTSRE+
Sbjct: 401 AASTVFWICKYTQVRGEDHMAATRRI-LTQDRRLCINAGSHERRKRKRRRKRKSHTSREN 459
Query: 375 DLRHDRSVRR 346
R D S RR
Sbjct: 460 --RLDISARR 467
>SB_48450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 32.3 bits (70), Expect = 0.43
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +1
Query: 97 HAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVDILRIYML 276
H +S IVRH + S H+ + H + H++ +I+H H DI+R +
Sbjct: 31 HHQTSSDIVRHHQTSSDIIRHHQTFIRHHQTFIRHSSDIIRH-----HQTSSDIIRHHQT 85
Query: 277 RQ*SNT 294
S T
Sbjct: 86 SSDSRT 91
>SB_18393| Best HMM Match : RCSD (HMM E-Value=2.6)
Length = 249
Score = 31.9 bits (69), Expect = 0.57
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 157 HY-TPVLSHAAPVLTHAAPLIQHAGPIVH 240
HY TP+ H P L H PL QH P+ H
Sbjct: 62 HYKTPLRHHKTPYLQHKTPLRQHKTPLRH 90
Score = 31.1 bits (67), Expect = 0.99
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 124 RHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPI-VHAAPV 252
+H P Q H TP+ H P+ H PL QH P+ H P+
Sbjct: 153 QHKTPLRQ---HKTPLRQHKTPLRQHKTPLRQHKTPLRQHKTPL 193
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 157 HYTPVLSHAAPVLTHAAPLIQHAGPI-VHAAPV 252
H TP+ H P+ H PL QH P+ H P+
Sbjct: 147 HKTPLRQHKTPLRQHKTPLRQHKTPLRQHKTPL 179
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 124 RHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPI-VHAAPV 252
+H P Q H TP+ H P+ + PL QH P+ H P+
Sbjct: 118 QHKTPLRQ---HKTPLRQHKTPLRQYKTPLRQHKTPLRQHKTPL 158
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 124 RHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPI-VHAAPV 252
+H P Q + TP+ H P+ H PL QH P+ H P+
Sbjct: 132 QHKTPLRQ---YKTPLRQHKTPLRQHKTPLRQHKTPLRQHKTPL 172
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 124 RHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQH 222
+H P Q H TP+ H P+ H PL QH
Sbjct: 167 QHKTPLRQ---HKTPLRQHKTPLRQHKTPLRQH 196
>SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 255 HSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDH--VEDHAP 383
HS SPV +HFS +H+PV + + S+H V +H+P
Sbjct: 1325 HSPVSEHSPVSEHFSVSEHSPVSKQSPVSEQSPVSEHSPVSEHSP 1369
Score = 31.5 bits (68), Expect = 0.75
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 276 SPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDP 419
SPV +H +H+ V H+++ EHS V +H+P FS S P
Sbjct: 1302 SPVSEHSRVSEHSSVSEHSSVS---EHSP-VSEHSPVSEHFSVSEHSP 1345
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 255 HSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDP 419
HS S V +H S +H+PV H+ P++ EH V +H+P + S + P
Sbjct: 1307 HSRVSEHSSVSEHSSVSEHSPVSEHS--PVS-EHFS-VSEHSPVSKQSPVSEQSP 1357
>SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017)
Length = 1495
Score = 31.9 bits (69), Expect = 0.57
Identities = 23/58 (39%), Positives = 27/58 (46%)
Frame = -2
Query: 339 ESQRGARLEHVAQG*SVGLLAKHVYTKNVHGGGVNNRTGMLNQRGCVSQYWSSMTQYW 166
+SQ GA VAQG +VGL A Y NV GV+ M Q Q + TQ W
Sbjct: 189 QSQGGASTAPVAQGGAVGLPANEQYQGNVTQQGVS----MQQQYQWQQQPYQQQTQQW 242
>SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1446
Score = 30.7 bits (66), Expect = 1.3
Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 4/115 (3%)
Frame = +1
Query: 106 SSQSIVRHDEPSHQATA-HYTPVLSHAAPVLTHAAP---LIQHAGPIVHAAPVDILRIYM 273
SS + + H P+H ATA T L H + + +P + H P + +
Sbjct: 969 SSTASLAHTSPAHLATASQITHPLPHRTISIPYPSPPHTTSSQSSQATHTPPPRAVDLPH 1028
Query: 274 LRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLPRSMSSHIPSRIPTPAITS 438
++SAL + + L + +NT I S+ P S +S PS T T+
Sbjct: 1029 PSSPHSSSALYSSPSRTSNLPYTTYTNTAISSQPSPPYSSTSPHPSHFSTRVSTN 1083
>SB_52135| Best HMM Match : RCSD (HMM E-Value=4.8)
Length = 476
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 270 HASPVVQHFSPV-QHA-PVVHHAAIPIAVEHSDHVEDHA 380
H+ P+ H P+ H+ P+ H+ P+ +HSDHV DH+
Sbjct: 435 HSDPLTDHSDPLTDHSDPLTDHSD-PLT-DHSDHVTDHS 471
>SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33)
Length = 958
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 97 HAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVDILRIYML 276
H + + +R+ PS+ T + P+ P T ++H + ++ P + + +
Sbjct: 704 HTLKYLTTLRYSGPSN--TPLHFPIPDPRKPRYTSLFRTLEHLTTLRYSTPSNTSLHFAI 761
Query: 277 R--Q*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLPRS 390
+ + ++L + L+ TTLR+ PSNT + I PR+
Sbjct: 762 PHPRTPHYTSLFHTLEHLTTLRYSTPSNTLLYFAIPHPRT 801
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = +1
Query: 97 HAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVDILRIYML 276
H + + +R+ PS+ T + + P T ++H + ++ P + + +
Sbjct: 844 HTLEHLTTLRYSTPSN--TLLHFAIPDPRTPYYTSLFHTLEHLTTLRYSGPSNTSLHFAI 901
Query: 277 R--Q*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLPRS 390
+ + ++L + L+ TTLR+ PSNT + I PR+
Sbjct: 902 PHPRTPHYTSLFHTLEHLTTLRYSTPSNTSLHFAIPHPRT 941
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/63 (22%), Positives = 28/63 (44%)
Frame = +3
Query: 264 YIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQ 443
Y S + HF+ + H + H+ ++ ++H P+K +++ DP T + S
Sbjct: 644 YFGPSNTLLHFA-IPHPQIPHYTSLFRTLKHPTTFPYSGPSKTSLHFAISDPRTPYYTSL 702
Query: 444 HET 452
T
Sbjct: 703 FHT 705
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +1
Query: 121 VRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVDILRIYMLR--Q*SNT 294
+R+ PS+ T+ + + P T ++H + ++ P + L + + + +
Sbjct: 747 LRYSTPSN--TSLHFAIPHPRTPHYTSLFHTLEHLTTLRYSTPSNTLLYFAIPHPRTPHY 804
Query: 295 SALCNMLQSCTTLRFQLPSNTPIMSKIMLPRS 390
++L L+ TTLR+ PSNT + I PR+
Sbjct: 805 TSLFRTLKYLTTLRYSTPSNTSLHFAIPHPRT 836
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 295 SALCNMLQSCTTLRFQLPSNTPIMSKIMLPR 387
++L + L+ TTLR+ PSNTP+ I PR
Sbjct: 700 TSLFHTLKYLTTLRYSGPSNTPLHFPIPDPR 730
>SB_58551| Best HMM Match : GLTT (HMM E-Value=5.7e-23)
Length = 272
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 343 IGIAAWCTTGACCTGLKCWTTG 278
IG CTTG C TG+ WTTG
Sbjct: 97 IGTTGICTTGICTTGI--WTTG 116
>SB_40909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 30.3 bits (65), Expect = 1.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 591 HLHSPGSCCPRRSPQLHFG 647
H+H+ G CCP+ +P +H G
Sbjct: 90 HVHTFGVCCPKAAPIIHLG 108
>SB_34294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 223
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 142 HQATAHYTPVLSHAAPVLTHAAPLIQHAGP 231
H H TP HA P HA P HA P
Sbjct: 38 HPYKNHATPYKDHATPYKDHATPYKDHATP 67
>SB_46011| Best HMM Match : DNA_ligase_ZBD (HMM E-Value=2.9)
Length = 373
Score = 29.9 bits (64), Expect = 2.3
Identities = 46/191 (24%), Positives = 71/191 (37%), Gaps = 7/191 (3%)
Frame = +1
Query: 46 CSILAICQGGVIDEGHGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHA 225
C L I G+ + H +S + HD Q T HY P L P +T L +H
Sbjct: 93 CPTLLIKTPGITAQ---HCLSKHPALLHDIDC-QNTRHYCPTLLIKTPGITAQYCLSKHP 148
Query: 226 GPIVHAAPVDILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLPRSMSSHI 405
+ + A + YM + + L N+ +C R P+ I +S H
Sbjct: 149 ALLPNIACQNTRHYYMTLLVKHAALLPNI--ACQNTRRYCPTLLMKTPGITAQHCLSKH- 205
Query: 406 PSRIPTPAITSPNTK---PVMVMS*KANTLYSSLMVPSQGRIHS*PPQRIQRYCTQL--- 567
P +P I NT+ P++++ T L + + Q + YC L
Sbjct: 206 PVLLPN--IACQNTRHYCPILLVKIPGITAQYCLS-KYPALLPNIACQNTRHYCPTLLVK 262
Query: 568 -PSLNAQRCTS 597
P + AQ C S
Sbjct: 263 TPGITAQYCLS 273
>SB_27287| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 743 HRGVEMNLQGARIESQLGSRMNHKGPRMDLLEAEMKLRGPAWTA 612
+R M++ R++ +RMN RMD+ + K R P WT+
Sbjct: 37 NRNTRMDMTNNRMD-MTNNRMNMTNTRMDVPNTKWKTRTPEWTS 79
>SB_11862| Best HMM Match : Homeobox (HMM E-Value=1.1e-16)
Length = 99
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = -2
Query: 711 QN*KPTWKQNESQGAKNGLTGSRNEAAGTGVDSRSPANGGAALCVQARKLCTIALNPLWW 532
QN + WK+ ++ + ++E++ +GV ++PA V+ T+ L W
Sbjct: 38 QNRRMKWKKKNNKNSSVEKDKEKSESSSSGVKDKTPARPREDRAVEITSATTLKYGMLHW 97
Query: 531 S 529
S
Sbjct: 98 S 98
>SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23)
Length = 1153
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1
Query: 325 TTLRFQLPSNTPIMSKIMLPRSMSSHIPSRIPTPAITSPNTKPV 456
+TL L S TP + + PR++ S +PS PT T P KPV
Sbjct: 804 STLIATLQSPTPQTTTVATPRTVISALPS--PTVVPTVPPAKPV 845
>SB_51497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Frame = +3
Query: 237 SRRPRGHSSYIHASPVVQHFSPVQ-HAPV--VHHAAIPIAVEHSDHVEDHAPAKYEFSYS 407
+R GHSS I S Q + V AP H + S H DH AK++ Y
Sbjct: 72 TRSRHGHSSSIITSRSQQQHNHVTVTAPTRSCHGHSSSTVTSRSQHQHDHVTAKHQHDY- 130
Query: 408 VEDPHTGDH 434
V H DH
Sbjct: 131 VTAQHQHDH 139
>SB_51596| Best HMM Match : DUF652 (HMM E-Value=8.3)
Length = 92
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 252 GHSSYIHASPVVQHFSPVQHAPVVHHAAIPIA 347
GH++Y+ A+ +V+H S V A +V H A IA
Sbjct: 58 GHTAYVIAAMMVRHTSYVIAAMMVRHTAYVIA 89
>SB_5401| Best HMM Match : DUF652 (HMM E-Value=3)
Length = 287
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 252 GHSSYIHASPVVQHFSPVQHAPVVHHAAIPIA 347
GH++Y+ A+ +V+H S V A +V H A IA
Sbjct: 106 GHTAYVIAAMMVRHTSYVIAAMMVRHTAYVIA 137
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -2
Query: 408 RNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQG*SVGLLAKHVYTK 259
R R H ++ R++R+ +RQL AR+E +QG +GL + +T+
Sbjct: 1486 RGRRCH--EDNSRRYERAAQRQLNLDNTARVEQTSQG-QLGLRREEEHTR 1532
>SB_8567| Best HMM Match : EB (HMM E-Value=2.3)
Length = 179
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 325 CTTGACCTGLKCWTTGEACIYEECPRG 245
C TGA C G++C +TG C EC G
Sbjct: 128 CPTGAHCEGVEC-STGTHCEGVECSTG 153
>SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1858
Score = 28.7 bits (61), Expect = 5.3
Identities = 40/161 (24%), Positives = 62/161 (38%), Gaps = 12/161 (7%)
Frame = +3
Query: 60 YLPRWCYRRGPRPCCVFPKHRSP*---RAFSSSNGTLYPSIESCCSSTDSRSPFDSTCRS 230
Y P R + V PK R+ R+FS+ L+ S+ +TD S F S+ ++
Sbjct: 389 YTPSRSLRSANKNLLVIPKSRTKTYGDRSFSNFAAKLWNSLPLHIRNTDCLSKFKSSLKT 448
Query: 231 Y--------CSRRPRGHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEH-SDHVEDHAP 383
Y + RPR + A P + P A ++ P E+ SD D
Sbjct: 449 YLFSSDVVAANPRPRTNGQIPIACPQRRRKDP---AVLLDRLDPPNVPEYWSDSTNDE-- 503
Query: 384 AKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQPDGS 506
+F + + PH GD K + V+ + P GS
Sbjct: 504 ---DFDVTNKRPHGGDLKEAMARKIAAKVRSIVGAVAPSGS 541
>SB_14511| Best HMM Match : Keratin_B2 (HMM E-Value=2.2)
Length = 276
Score = 28.7 bits (61), Expect = 5.3
Identities = 25/123 (20%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = +1
Query: 304 CNMLQSCTTLRFQLPSNTPIMSKIMLPRSMSSHIPSRIPTPAITSPNTKPVMVMS*KA-- 477
C + S T R + ++S ++S+ + T + + +T+P++ +S +
Sbjct: 76 CQRVLSSTCQRVLSSTCQRVLSSTRTLVNLSTRPLVNLSTRPLDNLSTRPLVNLSTRPFI 135
Query: 478 NTLYSSLM-VPSQGRIHS*PPQRIQRYCTQLPSLNAQRCTSIRRAPAVHAGPRSFISASS 654
N+ L+ S+ R+ S P + QL + ++++ + VH+ R F++ASS
Sbjct: 136 NSSTRPLVNASSRQRVLSSTPPLVNASSRQLVNASSRQLVNASSRQRVHSSMRPFVNASS 195
Query: 655 KSI 663
+ +
Sbjct: 196 RQL 198
>SB_25525| Best HMM Match : ABC1 (HMM E-Value=1.19993e-41)
Length = 1008
Score = 28.3 bits (60), Expect = 7.0
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = +1
Query: 187 PVLTHAAPLIQHAGPIVHAAPVDILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIM 366
P H A L+ A I +PV + + R S + A C SC + L S P +
Sbjct: 930 PCHVHQASLLSRAPSI---SPVTCTKHLLSRAPSISPATCIKHLSCHVHQASLLSRAPSI 986
Query: 367 SKIMLPRSMSSHIPSRIP 420
S + + +S H+ P
Sbjct: 987 SPVTCTKHLSCHVHQASP 1004
>SB_18731| Best HMM Match : DUF1309 (HMM E-Value=2)
Length = 356
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 118 IVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVDI 258
I+ H P H ++ H AP++ H +I H P+V P I
Sbjct: 157 IIYHPPPE---VYHRPDIVVHRAPIMLHRPAIIYHQPPVVVHRPAII 200
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 157 HYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVDIL 261
H ++ H PV+ H +I H PIV P ++
Sbjct: 181 HRPAIIYHQPPVVVHRPAIIYHQPPIVFHQPPPVV 215
>SB_50965| Best HMM Match : HEAT (HMM E-Value=1.2e-12)
Length = 492
Score = 27.9 bits (59), Expect = 9.2
Identities = 21/106 (19%), Positives = 44/106 (41%)
Frame = +3
Query: 162 YPSIESCCSSTDSRSPFDSTCRSYCSRRPRGHSSYIHASPVVQHFSPVQHAPVVHHAAIP 341
+ +++ C + + D+ R P+ + HASP ++ + + + ++ I
Sbjct: 165 FGALQKICEDSAEQLDSDALNRPLNVLIPKFLQFFRHASPKIRLVPILVNG--MRYSEID 222
Query: 342 IAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGE 479
+ + +D+ +D A E + H QHE DG+ GE
Sbjct: 223 LILLKADNEDDEAVPDSEQDIKPRFHKSKTHSQQHEDGDGESDDGE 268
>SB_41867| Best HMM Match : F-box (HMM E-Value=4.5e-08)
Length = 607
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -3
Query: 668 PRMDLLEAEMKLRGPAWTAGARRMEVQRCAFRLGSCVQ*R*IRC 537
P D L+ ++ R +W GAR +++ C C++ RC
Sbjct: 62 PGCDRLDVDVLSRVLSWCPGAREVDISSCPLVNDQCIEVIATRC 105
>SB_41288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 106 SSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQH 222
+++ +V PSH +A YTP S AP L H
Sbjct: 37 TTRGLVEEPGPSHSRSADYTPDHSEQAPASASRKKLSDH 75
>SB_36327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 409
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -1
Query: 325 CTTGACCTGLKCWTTGEACIYEECPRGRRE 236
C +C G + + E+C+ C RG RE
Sbjct: 255 CVCTSCTRGARVYKVYESCVCTRCTRGVRE 284
>SB_35669| Best HMM Match : CCT (HMM E-Value=9.1)
Length = 101
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 106 SSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQH 222
+++ +V PSH +A YTP S AP L H
Sbjct: 37 TTRGLVEEPGPSHSRSADYTPDHSEQAPASASRKKLSDH 75
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -2
Query: 171 YWGIMCRCLMRRLVMANDALGRHSMAVALVYNTTLANSQNRADYSN 34
Y G+MC + + +D+ RH M + L+ ++ ++R D N
Sbjct: 165 YIGVMCDRCSHKAIRKSDSKNRHDMELPLLLPPCNSSKRSRHDSEN 210
>SB_4416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 40 VVCSILAICQGGVIDEGHGHAVSSQSI 120
+V ++ I +GGV+D HG A+ S++I
Sbjct: 158 LVMAMETIGEGGVVDNSHGKALDSKNI 184
>SB_58339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 106 SSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQH 222
+++ +V PSH +A YTP S AP L H
Sbjct: 37 TTRGLVEEPGPSHSRSADYTPDHSEQAPASASRKKLSDH 75
>SB_55599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 988
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +3
Query: 60 YLPRWCYRRGPRPCCVFPKHRSP*---RAFSSSNGTLYPSIESCCSSTDSRSPFDSTCRS 230
Y P R + V PK R+ R+FS+ L+ S+ ++TD S F S+ ++
Sbjct: 473 YTPSRSLRSANKNLLVIPKSRTKTYGDRSFSNIAAKLWNSLPLHITNTDCLSKFKSSLKT 532
Query: 231 YC-SRRPRGHSSYI 269
Y S P S +I
Sbjct: 533 YLFSMLPASFSRFI 546
>SB_36300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = -2
Query: 441 GTCDRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQ 301
G CDR+ + ++R + + HD+ +++ + + GAR E +++
Sbjct: 29 GACDRKAATIKSHIRQYVNEGHDVVTAANLQEAILADGGARGEGISE 75
>SB_33718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 586
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 106 SSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQH 222
+++ +V PSH +A YTP S AP L H
Sbjct: 37 TTRGLVEEPGPSHSRSADYTPDHSEQAPASASRKKLSDH 75
>SB_20140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 433
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 106 SSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQH 222
+++ +V PSH +A YTP S AP L H
Sbjct: 37 TTRGLVEEPGPSHSRSADYTPDHSEQAPASASRKKLSDH 75
>SB_12334| Best HMM Match : 7tm_1 (HMM E-Value=0.35)
Length = 311
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 522 YSTLRWNHQAGVESIRLSRHHH-HGFRVGTCDRR 424
YS ++W + + +LS HHH HG + RR
Sbjct: 43 YSVIKWGMKYKINEKKLSLHHHFHGLQQRETRRR 76
>SB_4465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 106 SSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQH 222
+++ +V PSH +A YTP S AP L H
Sbjct: 37 TTRGLVEEPGPSHSRSADYTPDHSEQAPASASRKKLSDH 75
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,700,608
Number of Sequences: 59808
Number of extensions: 676034
Number of successful extensions: 4318
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 3780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4259
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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