Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30573
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 36 0.040
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 34 0.093
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 32 0.38
AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical ... 31 0.87
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 30 2.0
AF016681-18|AAO91734.1| 330|Caenorhabditis elegans Serpentine r... 30 2.0
AC006730-9|AAO91686.1| 330|Caenorhabditis elegans Serpentine re... 30 2.0
Z74042-9|CAA98526.1| 325|Caenorhabditis elegans Hypothetical pr... 29 3.5
U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related... 29 3.5
AL132943-2|CAC14392.1| 367|Caenorhabditis elegans Hypothetical ... 29 3.5
AL021447-5|CAA16268.4| 312|Caenorhabditis elegans Hypothetical ... 29 4.6
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 29 4.6
AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 29 4.6
U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in bl... 28 6.1
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 28 6.1
AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen prot... 28 6.1
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ... 28 6.1
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ... 28 6.1
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 28 6.1
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 28 6.1
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr... 28 8.1
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 28 8.1
U41991-6|AAA83346.2| 344|Caenorhabditis elegans Seven tm recept... 28 8.1
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 28 8.1
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 28 8.1
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 35.5 bits (78), Expect = 0.040
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Frame = +3
Query: 258 SSYIHASPVVQHFSPVQHAPVVHHAAI--PIAVEHSDHVE--DHAPA--KYEF--SYSVE 413
S+ H+S +H + +PV + ++ P A EH +H E H+PA + EF S SV
Sbjct: 703 SNQFHSS---EHIEEARQSPVTNQESVHSPHASEHFEHREVVPHSPAASQEEFGRSPSVH 759
Query: 414 DPHTGDHKSQHE 449
PH +H HE
Sbjct: 760 SPHVSEHFEHHE 771
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 34.3 bits (75), Expect = 0.093
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +1
Query: 205 APLIQHAGPIVH-AAPVDILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIML 381
A L+ H GP+ + +D L+I +LR +N+ L SC + N+ S
Sbjct: 153 ADLVPHKGPVSYDRLHIDSLKI-ILRGSANSITLSRFFDSCLDRTRRTSLNSSSSSFFTK 211
Query: 382 PRSMSSHIPSRIPTPAITSPN 444
PRSM+ ++P + A + N
Sbjct: 212 PRSMTPNLPGASASAAAAAAN 232
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = +3
Query: 231 YCSRRPRGH---SSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 386
Y RR H SSYIH+S +QH H P + ++H H P+
Sbjct: 78 YSERRASYHVESSSYIHSSQQIQHPPQQHHPPPPSPPPVAETIQHQPHPSQQQPS 132
>AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical
protein F54E2.2 protein.
Length = 174
Score = 31.1 bits (67), Expect = 0.87
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 331 AWCTTGACCTGLKCWTTGEACIYEEC 254
+WCTT C G KC TG C Y C
Sbjct: 150 SWCTTDQDCKGKKCCPTG--CDYNVC 173
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/65 (26%), Positives = 20/65 (30%)
Frame = +3
Query: 252 GHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGD 431
GH H+ H HAP H H H E H + + H G
Sbjct: 492 GHHGSHHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGH 551
Query: 432 HKSQH 446
H S H
Sbjct: 552 HGSHH 556
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/64 (26%), Positives = 21/64 (32%)
Frame = +3
Query: 255 HSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDH 434
H + HA H HAP H H H H+PA + + E H H
Sbjct: 458 HGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHH--GHHGEHHHAPAH 515
Query: 435 KSQH 446
H
Sbjct: 516 HGHH 519
>AF016681-18|AAO91734.1| 330|Caenorhabditis elegans Serpentine
receptor, class i protein57 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.0
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +2
Query: 89 ATAMLC-LPKASFAMTSLL-IKQRHIIPQY*VMLLQY*LTQPL*FNMPVLLFTPPPWTFF 262
AT+++C LP S L + +I + ++L+ L P N+ VL+FT PP+ F
Sbjct: 246 ATSIICFLPPISLVFVVFLKLPNPQVIVE--LLLVVACLHSPA--NVTVLMFTFPPYRKF 301
Query: 263 V-YTCFASSPT-LQPCATCSS 319
V T F PT L+P + SS
Sbjct: 302 VCVTIFRQKPTGLEPISAKSS 322
>AC006730-9|AAO91686.1| 330|Caenorhabditis elegans Serpentine
receptor, class i protein78 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.0
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +2
Query: 89 ATAMLC-LPKASFAMTSLL-IKQRHIIPQY*VMLLQY*LTQPL*FNMPVLLFTPPPWTFF 262
AT+++C LP S L + +I + ++L+ L P N+ VL+FT PP+ F
Sbjct: 246 ATSIICFLPPISLVFVVFLKLPNPQVIVE--LLLVVACLHSPA--NVTVLMFTFPPYRKF 301
Query: 263 V-YTCFASSPT-LQPCATCSS 319
V T F PT L+P + SS
Sbjct: 302 VCVTIFRQKPTGLEPISAKSS 322
>Z74042-9|CAA98526.1| 325|Caenorhabditis elegans Hypothetical
protein T11F9.10 protein.
Length = 325
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +2
Query: 236 FTPPPWTFFVYTCFASSPTLQPCATCSSRAPRC 334
F PPP T V PT CATC+S PRC
Sbjct: 14 FEPPPTT--VLHLHIRPPT--SCATCTSNRPRC 42
>U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related
family protein 2 protein.
Length = 933
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -3
Query: 446 VLGLVIAGVGILDGI*ELILRGSMIFDMIGV 354
+LG+V AG+ IL G+ L L G D++GV
Sbjct: 304 ILGVVSAGIAILTGVGFLSLMGMPYNDIVGV 334
>AL132943-2|CAC14392.1| 367|Caenorhabditis elegans Hypothetical
protein Y116F11B.5 protein.
Length = 367
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 610 PAVHAGPRSFISASSKSILGPL*FILLPSWLSILAPCRFISTPLW 744
P + R S S IL P+ ++LP W++ ++ + T +W
Sbjct: 149 PFARSMQRLIYSKSGLKILLPIIILILPLWIAEISSTNIVETGIW 193
>AL021447-5|CAA16268.4| 312|Caenorhabditis elegans Hypothetical
protein F19B2.3 protein.
Length = 312
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +1
Query: 610 PAVHAGPRSFISASSKSILGPL*FILLPSWLSILAPCRFISTPLW 744
P R S S IL P+ ++LP W++ ++ + T +W
Sbjct: 149 PLASGMQRLIYSKSGLKILLPIIILILPLWIAEISSTNIVETGIW 193
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 584 NAAPPFAGLLLSTPVPAASFRLPVSPFLAPCDSF 685
+AAP A +L +P P AS PV+P AP SF
Sbjct: 344 HAAPQLAAMLQRSPPPCAS-APPVAPPTAPSTSF 376
>AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical
protein Y18H1A.9 protein.
Length = 488
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +3
Query: 114 KHRSP*RAFSSSNGTLYPSIESCCSSTDSRSPFD 215
K+RSP + + G P +CC D FD
Sbjct: 247 KNRSPPKCIQQATGLFQPPTTTCCQGVDLNRNFD 280
>U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 3 protein.
Length = 242
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +3
Query: 165 PSIESCCSSTDSRSPFDSTCRSYCSRRPRGHSSYIHASPVVQHFSPVQHAPVVHHAAIP 341
P+ + C + +PF + C+S C + + S A+ +PVQH P P
Sbjct: 21 PACQQSCQNQCKSAPFVNQCQSSCQQNCQTSSCSASAT-----LAPVQHVPQCQQQCAP 74
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 28.3 bits (60), Expect = 6.1
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Frame = +3
Query: 165 PSIESCCSSTDSRSPFDSTCRSYCSRRPRGH----SSYIHASPVVQHFSPVQHAPV-VHH 329
P E S + + FDS R+P + +S + S V SP+ P +H+
Sbjct: 296 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 353
Query: 330 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 491
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 354 LPVLIVMNNDGHLSTHRITLHEGVTGVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 408
>AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen protein
72 protein.
Length = 205
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -2
Query: 747 TPQGG*NEPTRGQN*KPTWKQNESQGAKNGLTGSRNEAAGTGVD 616
T G N P GQN P W + G G R E G G D
Sbjct: 124 TGDKGPNGPP-GQNGPPGWAGRDGNIGPQGTPGGRGEPGGPGTD 166
>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
protein W03F11.6e protein.
Length = 1039
Score = 28.3 bits (60), Expect = 6.1
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Frame = +3
Query: 165 PSIESCCSSTDSRSPFDSTCRSYCSRRPRGH----SSYIHASPVVQHFSPVQHAPV-VHH 329
P E S + + FDS R+P + +S + S V SP+ P +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351
Query: 330 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 491
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
protein W03F11.6d protein.
Length = 1184
Score = 28.3 bits (60), Expect = 6.1
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Frame = +3
Query: 165 PSIESCCSSTDSRSPFDSTCRSYCSRRPRGH----SSYIHASPVVQHFSPVQHAPV-VHH 329
P E S + + FDS R+P + +S + S V SP+ P +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351
Query: 330 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 491
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 28.3 bits (60), Expect = 6.1
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Frame = +3
Query: 165 PSIESCCSSTDSRSPFDSTCRSYCSRRPRGH----SSYIHASPVVQHFSPVQHAPV-VHH 329
P E S + + FDS R+P + +S + S V SP+ P +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351
Query: 330 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 491
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 28.3 bits (60), Expect = 6.1
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Frame = +3
Query: 165 PSIESCCSSTDSRSPFDSTCRSYCSRRPRGH----SSYIHASPVVQHFSPVQHAPV-VHH 329
P E S + + FDS R+P + +S + S V SP+ P +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351
Query: 330 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 491
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical protein
T08G11.1b protein.
Length = 3185
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 219 TCRSYCSRRPRGHSSYIHASPVVQHFS 299
T +Y S+RP+ + +H SP++ H S
Sbjct: 2766 TASTYRSQRPKSFYNDLHISPIMMHLS 2792
>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical protein
T08G11.1a protein.
Length = 3212
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 219 TCRSYCSRRPRGHSSYIHASPVVQHFS 299
T +Y S+RP+ + +H SP++ H S
Sbjct: 2793 TASTYRSQRPKSFYNDLHISPIMMHLS 2819
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -2
Query: 468 RHHHHGFRVGTCDRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQR 328
RH HHG R G R G RRN S D D+ R+Q+ ++
Sbjct: 85 RHGHHG-RHGM-GRHGGHGRRNKSGSDSDSSDSSEDKKKRKQMRDKK 129
>U41991-6|AAA83346.2| 344|Caenorhabditis elegans Seven tm receptor
protein 44 protein.
Length = 344
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 599 FAGLLLSTPVPAASFRLPVSPFL-APCDSFCFQVGFQF 709
F L++ T VP F LP++PFL P ++G F
Sbjct: 245 FRALVVQTVVPTFLFVLPIAPFLIGPLLEPIIEIGMNF 282
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 165 PSIESCCSSTDSRSPFDSTCRSYCSRRPRGHSSYIHASPVVQHFSPVQHAP 317
P+ + C +PF + C+S C + + S Y A+P +PVQ P
Sbjct: 106 PACQQSCQMQCQSAPFVNECQSQCQQSCQTSSCYAPAAP-----APVQCMP 151
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Frame = -2
Query: 492 GVESIRLSRHHHHGFRVGTC--DRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGAR 319
G + R + HHH R D R D R R H + R DR R S+R R
Sbjct: 271 GADRKRSTEQHHHSHRSSRDHRDHRHRDHRGEHREHREHKEHRRDDR--HRSERSERSER 328
Query: 318 LE 313
E
Sbjct: 329 SE 330
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,930,326
Number of Sequences: 27780
Number of extensions: 480080
Number of successful extensions: 1740
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1721
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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