Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30572
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.8  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   5.8  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    22   5.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.7  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 521 DAWSDFGWSQLP 556
           D WS F W+ LP
Sbjct: 915 DQWSSFYWNLLP 926


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 521 DAWSDFGWSQLP 556
           D WS F W+ LP
Sbjct: 915 DQWSSFYWNLLP 926


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 106 KTHNIAQFFPIQLLNISVGTHLS 38
           + H +   FPI L  ISV T L+
Sbjct: 386 RQHAVTAKFPIYLYRISVETKLN 408


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 641 LKEVLRLKPSCP 606
           +KEVLRL PS P
Sbjct: 51  IKEVLRLYPSVP 62


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 17  ARRLPQAAKMGAY 55
           ++R+PQ AK GAY
Sbjct: 286 SQRVPQLAKNGAY 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,541
Number of Sequences: 336
Number of extensions: 3968
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)