Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30572
         (725 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...   123   6e-30
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    26   1.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.2  
EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein A...    23   9.6  
AY062193-1|AAL58554.1|  151|Anopheles gambiae cytochrome P450 CY...    23   9.6  

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score =  123 bits (296), Expect = 6e-30
 Identities = 54/70 (77%), Positives = 61/70 (87%)
 Frame = +2

Query: 44  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 223
           MGAYRY+QELYRKK SDVMR+LLRVR WQYRQ+TR HRAPRP RP + RRLGY+AK G+ 
Sbjct: 1   MGAYRYVQELYRKKQSDVMRYLLRVRAWQYRQMTRFHRAPRPWRPTRLRRLGYKAKTGFS 60

Query: 224 VFRIRVRRGG 253
           +FRIRVR GG
Sbjct: 61  IFRIRVRCGG 70



 Score =  121 bits (292), Expect = 2e-29
 Identities = 55/83 (66%), Positives = 63/83 (75%)
 Frame = +1

Query: 256 KRPVAKGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFE 435
           KRPV KG TYGKPKSHGVNQLKP R LQS+AEE            +SYWVAQD+++KYFE
Sbjct: 72  KRPVHKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGGRLGGLRVLNSYWVAQDAAHKYFE 131

Query: 436 VILVDPSHKAIRRDPKINWIVNA 504
           VI+VDP + AIRRDP +NWI NA
Sbjct: 132 VIMVDPPNNAIRRDPNVNWICNA 154



 Score = 66.1 bits (154), Expect = 1e-12
 Identities = 30/35 (85%), Positives = 33/35 (94%)
 Frame = +3

Query: 510 KHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAA 614
           KHRE+RGLTSAG+SSRGLGK +RYSQT GGSRRAA
Sbjct: 157 KHRELRGLTSAGKSSRGLGKAYRYSQTIGGSRRAA 191


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 555 RGLGKGHRYSQTKGGSRRAAWLQTQHFF-QLRSQTINI 665
           +G+G GH Y   + G RR   L   ++  +L S  I++
Sbjct: 320 KGVGSGHLYYYEENGDRRKITLNDVYYVPELESNLISV 357


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 253 PKRPVAKGATYGKPKSH 303
           P RP +   +YGKP  H
Sbjct: 402 PSRPPSVAGSYGKPNDH 418


>EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein AA
           protein.
          Length = 62

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 166 PGSAVHTSQLTVLPYPHTQQKTH 98
           PGS   +SQ +   + H QQ+ H
Sbjct: 14  PGSGASSSQRSPFHHHHQQQQNH 36


>AY062193-1|AAL58554.1|  151|Anopheles gambiae cytochrome P450
           CYP4D15 protein.
          Length = 151

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 695 KWKVTDSFR*DVYRLRT*LKEVLRLKPSCP 606
           K  VT +   D++ L   +KE LRL PS P
Sbjct: 47  KQPVTMAMLNDMHYLDLVIKETLRLYPSVP 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 813,797
Number of Sequences: 2352
Number of extensions: 15802
Number of successful extensions: 47
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)