Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30571
(354 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 131 4e-30
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 128 2e-29
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 111 4e-24
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 107 7e-23
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 99 2e-20
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 85 2e-16
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 84 8e-16
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 83 2e-15
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 81 5e-15
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 79 2e-14
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 65 4e-10
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 63 2e-09
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 60 1e-08
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 52 4e-06
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 46 2e-04
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 44 7e-04
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 42 0.002
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 41 0.005
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 40 0.016
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 38 0.037
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 38 0.065
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 37 0.086
UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga... 36 0.15
UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilu... 36 0.20
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 36 0.20
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 36 0.26
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 35 0.35
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 35 0.46
UniRef50_Q6LTM2 Cluster: Chemotaxis response regulator protein-g... 35 0.46
UniRef50_Q090W0 Cluster: Gp248; n=3; Cystobacterineae|Rep: Gp248... 34 0.61
UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia... 34 0.80
UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 34 0.80
UniRef50_Q4SC98 Cluster: Chromosome undetermined SCAF14659, whol... 33 1.4
UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1; Tet... 33 1.9
UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides im... 33 1.9
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 32 3.2
UniRef50_Q751J3 Cluster: Serine/threonine-protein kinase TEL1; n... 32 3.2
UniRef50_UPI000155EEEB Cluster: PREDICTED: similar to leukocyte ... 31 4.3
UniRef50_Q1Q4N9 Cluster: Similar to glycosyltransferase family 2... 31 5.7
UniRef50_Q2H6V1 Cluster: Putative uncharacterized protein; n=5; ... 31 5.7
UniRef50_UPI000034E948 Cluster: UPI000034E948 related cluster; n... 31 7.5
UniRef50_Q2W9B7 Cluster: Putative uncharacterized protein; n=3; ... 31 7.5
UniRef50_Q21DT8 Cluster: ABC-1; n=1; Saccharophagus degradans 2-... 31 7.5
UniRef50_Q245H5 Cluster: Calponin homology (CH) domain protein; ... 31 7.5
UniRef50_A2QIG4 Cluster: Putative uncharacterized protein; n=1; ... 31 7.5
UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus... 31 7.5
UniRef50_A2BJE6 Cluster: Putative uncharacterized protein; n=1; ... 31 7.5
UniRef50_Q9H5N1 Cluster: Rab GTPase-binding effector protein 2; ... 31 7.5
UniRef50_Q825F8 Cluster: Putative two-component system response ... 30 9.9
UniRef50_Q07NT1 Cluster: Putative uncharacterized protein; n=1; ... 30 9.9
UniRef50_Q9VX38 Cluster: CG8326-PA; n=3; Sophophora|Rep: CG8326-... 30 9.9
UniRef50_Q0C9I8 Cluster: Predicted protein; n=1; Aspergillus ter... 30 9.9
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 131 bits (316), Expect = 4e-30
Identities = 60/84 (71%), Positives = 71/84 (84%)
Frame = +2
Query: 8 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 187
RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV
Sbjct: 151 RKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDV 210
Query: 188 CIRKVKVLKRPRFEISKLMELHAK 259
+RKVK+LK+P+FE+ KLMELH +
Sbjct: 211 FVRKVKMLKKPKFELGKLMELHGE 234
Score = 30.3 bits (65), Expect = 9.9
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 295 ERPEGYEPPVQESV 336
ER +GYEPPVQESV
Sbjct: 251 ERADGYEPPVQESV 264
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 128 bits (310), Expect = 2e-29
Identities = 58/84 (69%), Positives = 72/84 (85%)
Frame = +2
Query: 2 SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 181
SQRKTCYAQH+Q++ IR KM II R++T+++L+ VV KL+PDSIAKDIEKAC +YPL
Sbjct: 152 SQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLH 211
Query: 182 DVCIRKVKVLKRPRFEISKLMELH 253
DV IRKVKVLK+PRF++S LMELH
Sbjct: 212 DVYIRKVKVLKKPRFDLSSLMELH 235
Score = 31.1 bits (67), Expect = 5.7
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 295 ERPEGYEPPVQESV 336
+RPEGYEPPVQ SV
Sbjct: 256 DRPEGYEPPVQASV 269
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 111 bits (266), Expect = 4e-24
Identities = 55/91 (60%), Positives = 69/91 (75%), Gaps = 3/91 (3%)
Frame = +2
Query: 47 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 226
IRKKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P+F
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKF 170
Query: 227 EISKLMELHAKAVEARGK---PETSLNGRRA 310
E+ KLMELH + + GK ET + RA
Sbjct: 171 ELGKLMELHGEGCSS-GKATGDETGVKVERA 200
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 107 bits (256), Expect = 7e-23
Identities = 49/90 (54%), Positives = 68/90 (75%)
Frame = +2
Query: 8 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 187
+KTCYAQ +Q+R IR+KM EI+T T+ +L+E+V K IP+SI ++IEKA IYPL++V
Sbjct: 546 KKTCYAQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNV 605
Query: 188 CIRKVKVLKRPRFEISKLMELHAKAVEARG 277
IRKVK+LK P+F++ KLME+H E G
Sbjct: 606 YIRKVKILKAPKFDLGKLMEVHGDYSEDVG 635
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 99.1 bits (236), Expect = 2e-20
Identities = 44/85 (51%), Positives = 66/85 (77%)
Frame = +2
Query: 8 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 187
+KT YA +Q+RAIR+KM EII R+ + L+++ NKLIP+ I ++IEKA GIYPL++V
Sbjct: 151 KKTTYAASSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNV 210
Query: 188 CIRKVKVLKRPRFEISKLMELHAKA 262
IRKVK+LK+P+F++ L+ LH ++
Sbjct: 211 HIRKVKLLKQPKFDLGGLLALHGES 235
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 85.4 bits (202), Expect = 2e-16
Identities = 40/83 (48%), Positives = 59/83 (71%)
Frame = +2
Query: 8 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 187
R+ AQ+ QV I +I+ D ++L+EV+NKL+PD++ KD+EKAC IYPL DV
Sbjct: 136 RQLVCAQYQQVHQIWLITIQIM--DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDV 193
Query: 188 CIRKVKVLKRPRFEISKLMELHA 256
+RKVK+L++P+ ++ KL ELHA
Sbjct: 194 FVRKVKILQKPKLDLGKLPELHA 216
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 83.8 bits (198), Expect = 8e-16
Identities = 34/85 (40%), Positives = 58/85 (68%)
Frame = +2
Query: 5 QRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRD 184
Q+ YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI +D I+PL
Sbjct: 75 QKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSG 134
Query: 185 VCIRKVKVLKRPRFEISKLMELHAK 259
+RKVKVLK+P+ ++ +++ELH++
Sbjct: 135 ALVRKVKVLKKPKLDLGRILELHSE 159
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 82.6 bits (195), Expect = 2e-15
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = +2
Query: 113 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 253
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 47
Score = 31.5 bits (68), Expect = 4.3
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 295 ERPEGYEPPVQESV 336
ER EGYEPPVQESV
Sbjct: 66 ERAEGYEPPVQESV 79
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 81.0 bits (191), Expect = 5e-15
Identities = 41/100 (41%), Positives = 61/100 (61%)
Frame = +2
Query: 2 SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 181
S TCYA+ +QVRAIR+K+ IT + + E LI + K IEK I+PL+
Sbjct: 155 SSTSTCYAKSSQVRAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQ 214
Query: 182 DVCIRKVKVLKRPRFEISKLMELHAKAVEARGKPETSLNG 301
++ IRKVKVLKRP+ + +K+ EL++ E +G+ T +G
Sbjct: 215 NITIRKVKVLKRPKLDATKIAELYSH--EKKGEKATGRDG 252
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 79.4 bits (187), Expect = 2e-14
Identities = 34/83 (40%), Positives = 59/83 (71%)
Frame = +2
Query: 5 QRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRD 184
QRKT YAQ +Q++ IRKK+ EI+ ++V+ + +++ +S+AK+I KA I+PL++
Sbjct: 149 QRKTTYAQRSQIKDIRKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQN 208
Query: 185 VCIRKVKVLKRPRFEISKLMELH 253
+ +RKVK++KRP+ + KL E +
Sbjct: 209 ITLRKVKLVKRPKVDAQKLREFY 231
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 64.9 bits (151), Expect = 4e-10
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 14/107 (13%)
Frame = +2
Query: 5 QRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLI--------------PDSIAK 142
++KT YA+ ++V+AIRKKM +I+T V++++L+ VV+ LI ++A+
Sbjct: 149 KKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTVVDYLIGVSLNGVTTNASGFAPTLAE 208
Query: 143 DIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHAKAVEARGKP 283
I I+P+ +V IRKVKVLK P+ + +KL EL+A + + P
Sbjct: 209 KIRIEGSSIFPIHNVFIRKVKVLKTPKVDAAKLSELYASSATSTIAP 255
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 62.9 bits (146), Expect = 2e-09
Identities = 24/69 (34%), Positives = 48/69 (69%)
Frame = +2
Query: 8 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 187
+KTCY +H+ + IRK M ++I +++ ++++++ KL +++ K IE+ I+PL++
Sbjct: 103 KKTCYVKHSDEKKIRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNC 162
Query: 188 CIRKVKVLK 214
C+RKVK +K
Sbjct: 163 CVRKVKTIK 171
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 60.1 bits (139), Expect = 1e-08
Identities = 25/83 (30%), Positives = 53/83 (63%)
Frame = +2
Query: 5 QRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRD 184
Q + CYA+ V+ +R ++ ++I R ++ +++E V+ L + ++ + + C+ I PLR+
Sbjct: 153 QSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRE 212
Query: 185 VCIRKVKVLKRPRFEISKLMELH 253
+ IRKV+V++ P+F+ L+ H
Sbjct: 213 LRIRKVRVVRTPKFDAQALLSAH 235
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 51.6 bits (118), Expect = 4e-06
Identities = 22/68 (32%), Positives = 44/68 (64%)
Frame = +2
Query: 11 KTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVC 190
KT Y +Q RA+R+++ +II ++ N ++++ ++++ I + IE C I+P+ V
Sbjct: 148 KTVYINSSQKRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVN 207
Query: 191 IRKVKVLK 214
IRK+KV++
Sbjct: 208 IRKIKVVE 215
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 46.0 bits (104), Expect = 2e-04
Identities = 25/83 (30%), Positives = 43/83 (51%)
Frame = +2
Query: 5 QRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRD 184
+RK C+ + +R +R + E + ++ + +V KL + + +A I RD
Sbjct: 150 RRKNCHVKGRVIRMMRAGIYETLHNELGKVSIPVLVTKLSNFEVNAKLTEALQKITMCRD 209
Query: 185 VCIRKVKVLKRPRFEISKLMELH 253
V IR+VKV+KRPR + L +H
Sbjct: 210 VMIRRVKVVKRPRNTMELLSTMH 232
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 44.0 bits (99), Expect = 7e-04
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +2
Query: 23 AQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP----DSIAKDIEKACHGIYPLRDVC 190
A+ +Q RAIRK+M ++I + + E + + + +SI + I++A IYP+R
Sbjct: 122 AKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAE 181
Query: 191 IRKVKVLKRP 220
IRK +VL+ P
Sbjct: 182 IRKTEVLEEP 191
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = +2
Query: 179 RDVCIRKVKVLKRPRFEISKLMELH 253
R +C++KVK+LK+P+FE+ KLMELH
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELH 87
Score = 31.5 bits (68), Expect = 4.3
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 295 ERPEGYEPPVQESV 336
ER EGYEPPVQESV
Sbjct: 106 ERAEGYEPPVQESV 119
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 41.1 bits (92), Expect = 0.005
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +2
Query: 47 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 226
IRKK+ E +T E V +I D +++ K IYP+R + IRK +VL P
Sbjct: 141 IRKKIQEYLTEKARAMTFSEYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFPEE 200
Query: 227 EISKLM 244
+I +L+
Sbjct: 201 KIVELV 206
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 39.5 bits (88), Expect = 0.016
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +2
Query: 35 QVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 214
Q A+RKKM E + + + + + +++ ++A D+ I P+R V I K+KVLK
Sbjct: 142 QKSAMRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVAKKIAPMRKVEIAKIKVLK 201
Query: 215 RP 220
P
Sbjct: 202 YP 203
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 38.3 bits (85), Expect = 0.037
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Frame = +2
Query: 8 RKTCY----AQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYP 175
+ TC+ A+ +Q++AIR+ M +I+ + + ++ + + I ++ I + IYP
Sbjct: 120 KPTCFTIKRARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAKFIYP 179
Query: 176 LRDVCIRKVKVLKRP 220
LR V IRK +V P
Sbjct: 180 LRRVEIRKTQVEAMP 194
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 37.5 bits (83), Expect = 0.065
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +2
Query: 32 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 211
+Q RAIR M +I+ ++ + + + + + +I K IYP+R V IRK+++L
Sbjct: 135 SQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYKNAKKIYPIRRVEIRKIELL 194
Query: 212 KRP 220
P
Sbjct: 195 AEP 197
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 37.1 bits (82), Expect = 0.086
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 32 TQVRAIRKKMCEIITRDVTNSELREVVNKLI----PDSIAKDIEKACHGIYPLRDVCIRK 199
+Q AIRK M EI+ + S L E++ ++ S+A I+++ IYPLR V I K
Sbjct: 129 SQKSAIRKVMQEIVEQKARESTLDELIQLMVFSDHEGSLAYLIDESARKIYPLRKVEIAK 188
Query: 200 VKVLKRP 220
K+L P
Sbjct: 189 SKLLWVP 195
>UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3Ae -
Caldivirga maquilingensis IC-167
Length = 221
Score = 36.3 bits (80), Expect = 0.15
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +2
Query: 32 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 211
T IRK + + + + S+ +V I I D+ IYPLR V I K+KVL
Sbjct: 137 THKHLIRKSIMDRLDKVGQESDFDSLVRDSIMGKIQVDLFNVAKKIYPLRKVEIIKIKVL 196
Query: 212 KRPR 223
+ PR
Sbjct: 197 EYPR 200
>UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S3Ae - Thermofilum
pendens (strain Hrk 5)
Length = 207
Score = 35.9 bits (79), Expect = 0.20
Identities = 19/67 (28%), Positives = 38/67 (56%)
Frame = +2
Query: 32 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 211
+Q +AIR+ M +II+ + + + + + ++A +++ IYP++ V + K+KVL
Sbjct: 130 SQKKAIRRIMFDIISEKAASLDFDTFIQQAVIGTMATEMQMQAKKIYPIKKVEVYKIKVL 189
Query: 212 KRPRFEI 232
P EI
Sbjct: 190 -TPTTEI 195
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 35.9 bits (79), Expect = 0.20
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = +2
Query: 23 AQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 202
A +Q +AIR+ M +++ + ++++ ++ ++ I IYPLR V I+K
Sbjct: 126 ADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKDIYPLRRVEIKKT 185
Query: 203 KVLKRP 220
+ RP
Sbjct: 186 TLEARP 191
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 35.5 bits (78), Expect = 0.26
Identities = 24/85 (28%), Positives = 42/85 (49%)
Frame = +2
Query: 29 HTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 208
+T+ IRK + + I + E V LI D I D+ A IYPL+ + +RK ++
Sbjct: 132 NTKKFQIRKVLTDFILNKGLSLPYSEFVRYLIGDDIYNDMISATKDIYPLKKIEVRKSEL 191
Query: 209 LKRPRFEISKLMELHAKAVEARGKP 283
+ +S + E+HA + + +P
Sbjct: 192 V-----SLSGISEIHAGSQNSGEEP 211
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 35.1 bits (77), Expect = 0.35
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 14 TCYAQHT-QVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVC 190
T Y H Q IRK M +++ + E V ++I ++A +I I PLR
Sbjct: 130 TAYRVHREQATTIRKIMEDVVKKTAEGKTFDEFVQEMIFGNLANNIFNEAKKIAPLRKAE 189
Query: 191 IRKVKVLKRPRFEISK 238
I K KVL P + K
Sbjct: 190 IEKSKVLFAPLIKEGK 205
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 34.7 bits (76), Expect = 0.46
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +2
Query: 8 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 148
+KT YA+ Q++ IRK M +IT++ + EL + V+ L + K +
Sbjct: 153 KKTSYAKSAQIKKIRKIMNNLITKEAASRELTQFVDYLKKTNFQKKL 199
>UniRef50_Q6LTM2 Cluster: Chemotaxis response regulator
protein-glutamate methylesterase 2; n=3;
Gammaproteobacteria|Rep: Chemotaxis response regulator
protein-glutamate methylesterase 2 - Photobacterium
profundum (Photobacterium sp. (strain SS9))
Length = 394
Score = 34.7 bits (76), Expect = 0.46
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 65 EIITRDVTNSELREVVNKLIPDSIAKDIE-KACHGIYPLRDVCIRKVKVLKRPRFEISKL 241
E+I V E E+V KL PD I DIE GI +R++ +KVL P S L
Sbjct: 29 EVIGNAVNGKEAVELVKKLQPDVITMDIEMPVMDGITAVREI----MKVLPTPILMFSSL 84
Query: 242 MELHAKA 262
+ AKA
Sbjct: 85 TQEGAKA 91
>UniRef50_Q090W0 Cluster: Gp248; n=3; Cystobacterineae|Rep: Gp248 -
Stigmatella aurantiaca DW4/3-1
Length = 325
Score = 34.3 bits (75), Expect = 0.61
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +2
Query: 50 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 229
R + CE RD+ + + N + ++A + C G++P D +R+++ K P
Sbjct: 223 RLRHCERAWRDLLGDRVISMENPVDTVAVAAGLVGLCEGVFPNLDALVRRLEKEKMPPQR 282
Query: 230 ISKLMEL---HAKAVEARGKPETSLNGRRA 310
+ ++ A +E G P+ L+G A
Sbjct: 283 LGAVVRSLTPFASLLERDGVPKPRLSGDAA 312
>UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia
endosymbiont strain TRS of Brugia malayi|Rep: Predicted
protein, WF-1 - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 128
Score = 33.9 bits (74), Expect = 0.80
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +2
Query: 62 CEIITRDVTNSELREVVNK---LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEI 232
CE + D+ N ++VNK + D + DI+ I +DV I VKV+ P+ E
Sbjct: 42 CEKVKSDLKNPAYEDIVNKDTQIQEDGLVVDIDNCYFYIKYPQDVIIEVVKVINSPKVEE 101
Query: 233 SKLMELHAKAVEARGKPETSLNGRR 307
L E+ + E L G +
Sbjct: 102 LSLKHYIFYVEESIIRVEKKLKGEK 126
>UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasmatales|Rep: 30S ribosomal protein S3Ae -
Picrophilus torridus
Length = 209
Score = 33.9 bits (74), Expect = 0.80
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 47 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 217
+R K+ I + L E+ +I D++ DI +YP++ + IRK +VL R
Sbjct: 137 VRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIVDTLKDVYPIKKIEIRKSEVLGR 193
>UniRef50_Q4SC98 Cluster: Chromosome undetermined SCAF14659, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14659, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 526
Score = 33.1 bits (72), Expect = 1.4
Identities = 19/83 (22%), Positives = 36/83 (43%)
Frame = +2
Query: 29 HTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 208
H Q+ ++ +I+ + T S + + + P +DIE+A + + CI+ K
Sbjct: 398 HLQLCEGQQLKHQILLKSNTESAKQRWITAMFPSDPLEDIEQASENVDISQVQCIKSYKA 457
Query: 209 LKRPRFEISKLMELHAKAVEARG 277
+ + K LHAK + G
Sbjct: 458 QEHDELTLEKADILHAKTITGDG 480
>UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 553
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 8 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 154
R CY + Q++ + + D TNSE+ +VNKL +SI K +K
Sbjct: 496 RAKCYVEMKQMQEAIEDYIQCYKLDPTNSEVGVIVNKLKQESILKKKDK 544
>UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 363
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 95 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 247
EL V + +P + AK + CH Y L D ++ +K RFE L+E
Sbjct: 60 ELLWEVTRHLPPASAKMLAYTCHKFYHLSDTWLKNIKFFPVERFETLCLLE 110
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 31.9 bits (69), Expect = 3.2
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +2
Query: 41 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR- 217
++IR K +++ V + + ++ S+ +I+ IYP R V IRK ++L+
Sbjct: 146 QSIRAKTRDVLLGYVAKTTYDALQVAMLDGSLETEIQNQIKTIYPCRSVVIRKSQLLQEG 205
Query: 218 -PRFEISKLMELHAKAVEARGKPETSLNGRRATSL 319
E L E+HA+ EAR E + ++A +L
Sbjct: 206 VKMEEGPTLDEIHAE--EAR--KEAEIKAKKAAAL 236
>UniRef50_Q751J3 Cluster: Serine/threonine-protein kinase TEL1; n=2;
Eukaryota|Rep: Serine/threonine-protein kinase TEL1 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 2768
Score = 31.9 bits (69), Expect = 3.2
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = -1
Query: 240 NFEISKRGLFNTFTFRMQTSRRG*MPWQAFSMSLAMESGINLFTTSLSSELVTSRVMISH 61
N + GLF TF RM T + M W ++++ +L T LSS L+ +R
Sbjct: 2010 NSSVEHYGLFKTFARRMSTIQSAKMLWSQNETVMSIDMLKDLLHTPLSSNLI-ARARKQP 2068
Query: 60 IFFLIALT*VCWA*HVLRWL 1
F +A+ + +++WL
Sbjct: 2069 FFQQMAILDINVKAQLVQWL 2088
>UniRef50_UPI000155EEEB Cluster: PREDICTED: similar to leukocyte
immunoglobulin-like receptor; n=2; Laurasiatheria|Rep:
PREDICTED: similar to leukocyte immunoglobulin-like
receptor - Equus caballus
Length = 618
Score = 31.5 bits (68), Expect = 4.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 206 LSPFGCKHRAEGRCHGRPSRCPWQWSQES 120
+ P H RC+G PS P+ WSQ S
Sbjct: 188 VGPVNTSHGGTYRCYGSPSSYPYAWSQPS 216
>UniRef50_Q1Q4N9 Cluster: Similar to glycosyltransferase family 2;
n=1; Candidatus Kuenenia stuttgartiensis|Rep: Similar to
glycosyltransferase family 2 - Candidatus Kuenenia
stuttgartiensis
Length = 318
Score = 31.1 bits (67), Expect = 5.7
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 163 WHLPSARCLHPKGESVEEAPFR 228
WH+P AR +H GES +AP++
Sbjct: 212 WHVPDARVIHLGGESKRKAPWQ 233
>UniRef50_Q2H6V1 Cluster: Putative uncharacterized protein; n=5;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 916
Score = 31.1 bits (67), Expect = 5.7
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = +3
Query: 3 ANARRATPSTLRSEQSERKCVKSLHATSLTLNSGRW 110
ANA T S RS QS R+C L TS S RW
Sbjct: 105 ANATSLTTSEDRSRQSRRQCPNQLAPTSSRERSPRW 140
>UniRef50_UPI000034E948 Cluster: UPI000034E948 related cluster; n=3;
Bos taurus|Rep: UPI000034E948 UniRef100 entry - unknown
Length = 457
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 200 PFGCKHRAEGRCHGRPSRCPWQWSQES 120
P H RC+G PS P+ WSQ S
Sbjct: 190 PVNTSHGGTYRCYGSPSSYPYVWSQPS 216
>UniRef50_Q2W9B7 Cluster: Putative uncharacterized protein; n=3;
Magnetospirillum|Rep: Putative uncharacterized protein -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 282
Score = 30.7 bits (66), Expect = 7.5
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 68 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE-ISKLM 244
+IT D+ N + +V + +A+D + A + PL V KV RP++E + +L+
Sbjct: 48 VITDDLLNGTVGDVAALSMAAIVARDSQVALAAMLPL-SVAASKVSARHRPKYEQLFQLI 106
Query: 245 ELHAKAVEARGKPETSL 295
E A RG E +
Sbjct: 107 EETAFDSGVRGSAEAMI 123
>UniRef50_Q21DT8 Cluster: ABC-1; n=1; Saccharophagus degradans
2-40|Rep: ABC-1 - Saccharophagus degradans (strain 2-40
/ ATCC 43961 / DSM 17024)
Length = 480
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 92 SELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 202
S+L + L+P+ I K++ K+C+ + P+ IRK+
Sbjct: 91 SQLLSLEADLLPEGIRKELAKSCYQVPPINRALIRKM 127
>UniRef50_Q245H5 Cluster: Calponin homology (CH) domain protein; n=1;
Tetrahymena thermophila SB210|Rep: Calponin homology (CH)
domain protein - Tetrahymena thermophila SB210
Length = 1968
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -3
Query: 115 VHHLPEFRVSDVACNDFTHFLSDCSDLSVL 26
V +L F +V CNDF FLS C D +VL
Sbjct: 1263 VEYLGIFAELNVECNDFVSFLSLCKDGAVL 1292
>UniRef50_A2QIG4 Cluster: Putative uncharacterized protein; n=1;
Aspergillus niger|Rep: Putative uncharacterized protein
- Aspergillus niger
Length = 443
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 148 REGLPWHLPSARCLHPKGESVEEAP 222
R GLP HLP RCL P+ +V P
Sbjct: 168 RTGLPAHLPKTRCLSPRVAAVPIPP 192
>UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S3Ae -
Methanoregula boonei (strain 6A8)
Length = 201
Score = 30.7 bits (66), Expect = 7.5
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 23 AQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 202
A Q A+R + + +L +VN ++ I+KD+ K +YP R V I K
Sbjct: 130 ANIAQEHALRNAITAGLVAQAQAWDLNTLVNGVVSGEISKDLFKLVKTLYPTRRVEIIKS 189
Query: 203 KV 208
KV
Sbjct: 190 KV 191
>UniRef50_A2BJE6 Cluster: Putative uncharacterized protein; n=1;
Hyperthermus butylicus DSM 5456|Rep: Putative
uncharacterized protein - Hyperthermus butylicus (strain
DSM 5456 / JCM 9403)
Length = 407
Score = 30.7 bits (66), Expect = 7.5
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = -1
Query: 177 RG*MPWQAFSMSLAMESGINLFTTSLSSELVTSRVMISHIFFL 49
RG +PWQ ++ +L + SG+ LF + + + L + + S I+ L
Sbjct: 213 RGGVPWQVYAGTLVLFSGVALFFSPMPAYLREAGISDSGIYLL 255
>UniRef50_Q9H5N1 Cluster: Rab GTPase-binding effector protein 2;
n=23; Mammalia|Rep: Rab GTPase-binding effector protein
2 - Homo sapiens (Human)
Length = 569
Score = 30.7 bits (66), Expect = 7.5
Identities = 25/100 (25%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = +2
Query: 35 QVRAIRKKMCEIITRDVTNSELREVVNKLIP-DSIAKDIEKACHGIYPLRDVCIRKVKVL 211
Q R +++ CE R++ L++++++ P DS+ K +EKA LR++ + K +
Sbjct: 106 QERQQQQQDCEEKEREL--GRLKQLLSRAYPLDSLEKQMEKAHEDSEKLREIVLPMEKEI 163
Query: 212 KRPRFEISKLMELHAKAVEARGKPETSLNGRRATSLPFKR 331
+ + ++ + EL + ++ R + SL+G LP R
Sbjct: 164 EELKAKLLRAEEL-IQEIQRRPRHAPSLHG-STELLPLSR 201
>UniRef50_Q825F8 Cluster: Putative two-component system response
regulator; n=1; Streptomyces avermitilis|Rep: Putative
two-component system response regulator - Streptomyces
avermitilis
Length = 223
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 110 VNKLIPDSIAKDIEKA-CHGIYPLRDVCIRKVKVLKRPR 223
V + PD A D++ A HG+ PL DVC R L PR
Sbjct: 61 VRSVRPDVCAVDLDCADSHGVPPLADVCGRGAGSLTAPR 99
>UniRef50_Q07NT1 Cluster: Putative uncharacterized protein; n=1;
Rhodopseudomonas palustris BisA53|Rep: Putative
uncharacterized protein - Rhodopseudomonas palustris
(strain BisA53)
Length = 674
Score = 30.3 bits (65), Expect = 9.9
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +2
Query: 125 PDSIAKDIEKACHGIYPLRDVCIR---KVKVLKRPRFEISKLMELHAKAV 265
P K +E+AC +Y +R+ C R +V + KRP IS ++ A+
Sbjct: 481 PGFAEKLVERACGSVYLVRESCFRACEQVGIYKRPEHFISIEQSINVAAI 530
>UniRef50_Q9VX38 Cluster: CG8326-PA; n=3; Sophophora|Rep: CG8326-PA
- Drosophila melanogaster (Fruit fly)
Length = 332
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +2
Query: 86 TNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHAKAV 265
T+ + VN++ S+ + +A +G+ +R+ ++ V KRP+ EI +L++ K
Sbjct: 103 TDEDYLRRVNRMTNASVREAHYEAKYGVNVIRNPKTGEITVQKRPKNEIDELLKQKQKEQ 162
Query: 266 EARGK 280
GK
Sbjct: 163 RLAGK 167
>UniRef50_Q0C9I8 Cluster: Predicted protein; n=1; Aspergillus terreus
NIH2624|Rep: Predicted protein - Aspergillus terreus
(strain NIH 2624)
Length = 3451
Score = 30.3 bits (65), Expect = 9.9
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 203 SPFGCKHRAEGRCHGRPSRCPWQWSQESTCSPPP 102
SP C+ R HGR + P WS E S PP
Sbjct: 2702 SPDSCELRRSPSIHGRHNHPPRSWSLEEETSLPP 2735
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 314,291,794
Number of Sequences: 1657284
Number of extensions: 5488663
Number of successful extensions: 18085
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 17756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18082
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11514999177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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