Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30571
         (354 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   3.3  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   3.3  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   3.3  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   3.3  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   5.7  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    20   9.9  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    20   9.9  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    20   9.9  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 194 GCKHRAEGRC 165
           GC  R EGRC
Sbjct: 132 GCGERTEGRC 141


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 194 GCKHRAEGRC 165
           GC  R EGRC
Sbjct: 137 GCGERTEGRC 146


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 194 GCKHRAEGRC 165
           GC  R EGRC
Sbjct: 137 GCGERTEGRC 146


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -1

Query: 156 AFSMSLAMES-GINLFTTSLSSELVTSRVM 70
           A S+S   E  G +L  T+LSS LV SRV+
Sbjct: 599 ASSVSAGEEGLGNSLAITALSSILVLSRVI 628


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 172 VDAMAGLLDVLG 137
           V A+AGLL VLG
Sbjct: 300 VGALAGLLSVLG 311


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +1

Query: 160 PWHLPSARCLH 192
           P+H P   C+H
Sbjct: 328 PYHTPEPDCIH 338


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 126 LTPLPRTSRRPAMASTLCAM 185
           L  LP    RPA  ++ CA+
Sbjct: 149 LNLLPMNRNRPAYLASKCAL 168


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 172 VDAMAGLLDVLGNGVRNQLVHHL 104
           +D +   ++VLG+G    +V+HL
Sbjct: 473 LDRIRTSINVLGDGYGAGIVYHL 495


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,471
Number of Sequences: 438
Number of extensions: 1561
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8184330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)