Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30569
(649 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15805-1|CAA33804.1| 844|Drosophila melanogaster protein ( Dros... 149 2e-36
AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p pro... 149 2e-36
AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA... 149 2e-36
AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC... 140 1e-33
AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB... 140 1e-33
AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-P... 73 3e-13
AY058769-1|AAL13998.1| 949|Drosophila melanogaster SD04694p pro... 67 2e-11
BT003756-1|AAO41435.1| 674|Drosophila melanogaster RE71343p pro... 56 4e-08
AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p pro... 56 4e-08
AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA... 56 4e-08
BT003552-1|AAO39556.1| 676|Drosophila melanogaster LP12382p pro... 56 5e-08
AF017777-7|AAC28402.1| 679|Drosophila melanogaster waclaw protein. 56 5e-08
AE014298-3127|AAF50824.2| 696|Drosophila melanogaster CG1410-PA... 56 5e-08
AE014134-1251|AAF52495.2| 745|Drosophila melanogaster CG4567-PA... 49 6e-06
BT023763-1|AAZ41771.1| 639|Drosophila melanogaster RE37786p pro... 48 1e-05
AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-P... 42 5e-04
AY119138-1|AAM50998.1| 696|Drosophila melanogaster RE37995p pro... 34 0.14
AE014297-4239|AAF56796.2| 696|Drosophila melanogaster CG12413-P... 34 0.14
BT003749-1|AAO41413.1| 489|Drosophila melanogaster RH68252p pro... 33 0.25
AY058493-1|AAL13722.1| 300|Drosophila melanogaster GM14682p pro... 33 0.25
AE013599-1732|AAF58366.1| 489|Drosophila melanogaster CG6050-PA... 33 0.25
X06870-1|CAA29994.1| 462|Drosophila melanogaster EF-1-alpha pro... 33 0.44
X06869-1|CAA29993.1| 463|Drosophila melanogaster EF-1-alpha pro... 33 0.44
M11744-1|AAA28526.1| 463|Drosophila melanogaster protein ( D.me... 33 0.44
BT015202-1|AAT94431.1| 462|Drosophila melanogaster RE68984p pro... 33 0.44
BT011039-1|AAR30199.1| 463|Drosophila melanogaster LP10071p pro... 33 0.44
AE014297-4793|AAS65236.1| 462|Drosophila melanogaster CG1873-PD... 33 0.44
AE014297-4792|AAS65235.1| 462|Drosophila melanogaster CG1873-PC... 33 0.44
AE014297-4791|AAN14285.1| 462|Drosophila melanogaster CG1873-PB... 33 0.44
AE014297-4790|AAF57185.1| 462|Drosophila melanogaster CG1873-PA... 33 0.44
AE013599-1358|AAM68698.1| 463|Drosophila melanogaster CG8280-PB... 33 0.44
AE013599-1357|AAF58608.1| 463|Drosophila melanogaster CG8280-PA... 33 0.44
AE014297-3800|AAN14054.2| 881|Drosophila melanogaster CG31439-P... 31 1.0
BT010319-1|AAQ23637.1| 456|Drosophila melanogaster AT01345p pro... 30 3.1
AY058330-1|AAL13559.1| 456|Drosophila melanogaster GH10272p pro... 30 3.1
AE013599-436|AAF59240.1| 456|Drosophila melanogaster CG12736-PA... 30 3.1
BT003766-1|AAO41445.1| 670|Drosophila melanogaster RE29053p pro... 29 4.1
AE014296-376|AAF47584.2| 670|Drosophila melanogaster CG1898-PA ... 29 4.1
U88868-1|AAC24943.1| 619|Drosophila melanogaster elongation fac... 29 5.4
DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr... 29 5.4
DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p... 29 5.4
AY070979-1|AAL48601.1| 619|Drosophila melanogaster RE07731p pro... 29 5.4
AE014297-2514|AAF55548.1| 935|Drosophila melanogaster CG14309-P... 29 5.4
AE014134-2205|AAF53194.1| 619|Drosophila melanogaster CG6382-PA... 29 5.4
AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB... 29 5.4
AY069640-1|AAL39785.1| 396|Drosophila melanogaster LD40702p pro... 29 7.2
AE014296-2869|AAF49373.2| 396|Drosophila melanogaster CG7853-PA... 29 7.2
AB242867-1|BAF02844.1| 396|Drosophila melanogaster PAPS transpo... 29 7.2
DQ138932-1|ABA86538.1| 1387|Drosophila melanogaster CG12105 prot... 28 9.5
AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-P... 28 9.5
AE013599-3329|AAF46798.2| 1056|Drosophila melanogaster CG11073-P... 28 9.5
>X15805-1|CAA33804.1| 844|Drosophila melanogaster protein (
Drosophila DMEF2 genefor the translation elongation
factor 2. ).
Length = 844
Score = 149 bits (362), Expect = 2e-36
Identities = 71/74 (95%), Positives = 74/74 (100%)
Frame = +1
Query: 34 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 213
MVNFTVDEIRG+MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGA+AGETRFTDTR
Sbjct: 1 MVNFTVDEIRGLMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAKAGETRFTDTR 60
Query: 214 KDEQDRCITIKSTA 255
KDEQ+RCITIKSTA
Sbjct: 61 KDEQERCITIKSTA 74
Score = 140 bits (339), Expect = 1e-33
Identities = 80/130 (61%), Positives = 90/130 (69%)
Frame = +3
Query: 255 ISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXX 434
ISM+FE+EEKDLVFIT+PDQREK KGFLINLIDSPGHVDFSSEVTAALRVTDGAL
Sbjct: 75 ISMYFEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVD 134
Query: 435 XXXXXXXQTETVLRQAIAERIKPILS*TKWTVLFLSSNLKLKNYTRTFPGVL*KMLTSL* 614
QTETVLRQAIAERIKPIL K L L + +TF ++ + + +
Sbjct: 135 CVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQLDAEELYQTFQRIV-ENVNVII 193
Query: 615 ATL*PIDGGP 644
AT DGGP
Sbjct: 194 ATY-NDDGGP 202
>AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p
protein.
Length = 844
Score = 149 bits (362), Expect = 2e-36
Identities = 71/74 (95%), Positives = 74/74 (100%)
Frame = +1
Query: 34 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 213
MVNFTVDEIRG+MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGA+AGETRFTDTR
Sbjct: 1 MVNFTVDEIRGLMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAKAGETRFTDTR 60
Query: 214 KDEQDRCITIKSTA 255
KDEQ+RCITIKSTA
Sbjct: 61 KDEQERCITIKSTA 74
Score = 140 bits (339), Expect = 1e-33
Identities = 80/130 (61%), Positives = 90/130 (69%)
Frame = +3
Query: 255 ISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXX 434
ISM+FE+EEKDLVFIT+PDQREK KGFLINLIDSPGHVDFSSEVTAALRVTDGAL
Sbjct: 75 ISMYFEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVD 134
Query: 435 XXXXXXXQTETVLRQAIAERIKPILS*TKWTVLFLSSNLKLKNYTRTFPGVL*KMLTSL* 614
QTETVLRQAIAERIKPIL K L L + +TF ++ + + +
Sbjct: 135 CVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQLDAEELYQTFQRIV-ENVNVII 193
Query: 615 ATL*PIDGGP 644
AT DGGP
Sbjct: 194 ATY-NDDGGP 202
>AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA,
isoform A protein.
Length = 844
Score = 149 bits (362), Expect = 2e-36
Identities = 71/74 (95%), Positives = 74/74 (100%)
Frame = +1
Query: 34 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 213
MVNFTVDEIRG+MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGA+AGETRFTDTR
Sbjct: 1 MVNFTVDEIRGLMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAKAGETRFTDTR 60
Query: 214 KDEQDRCITIKSTA 255
KDEQ+RCITIKSTA
Sbjct: 61 KDEQERCITIKSTA 74
Score = 140 bits (339), Expect = 1e-33
Identities = 80/130 (61%), Positives = 90/130 (69%)
Frame = +3
Query: 255 ISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXX 434
ISM+FE+EEKDLVFIT+PDQREK KGFLINLIDSPGHVDFSSEVTAALRVTDGAL
Sbjct: 75 ISMYFEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVD 134
Query: 435 XXXXXXXQTETVLRQAIAERIKPILS*TKWTVLFLSSNLKLKNYTRTFPGVL*KMLTSL* 614
QTETVLRQAIAERIKPIL K L L + +TF ++ + + +
Sbjct: 135 CVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQLDAEELYQTFQRIV-ENVNVII 193
Query: 615 ATL*PIDGGP 644
AT DGGP
Sbjct: 194 ATY-NDDGGP 202
>AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC,
isoform C protein.
Length = 832
Score = 140 bits (339), Expect = 1e-33
Identities = 80/130 (61%), Positives = 90/130 (69%)
Frame = +3
Query: 255 ISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXX 434
ISM+FE+EEKDLVFIT+PDQREK KGFLINLIDSPGHVDFSSEVTAALRVTDGAL
Sbjct: 63 ISMYFEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVD 122
Query: 435 XXXXXXXQTETVLRQAIAERIKPILS*TKWTVLFLSSNLKLKNYTRTFPGVL*KMLTSL* 614
QTETVLRQAIAERIKPIL K L L + +TF ++ + + +
Sbjct: 123 CVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQLDAEELYQTFQRIV-ENVNVII 181
Query: 615 ATL*PIDGGP 644
AT DGGP
Sbjct: 182 ATY-NDDGGP 190
Score = 126 bits (304), Expect = 3e-29
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 249
MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGA+AGETRFTDTRKDEQ+RCITIKS
Sbjct: 1 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAKAGETRFTDTRKDEQERCITIKS 60
Query: 250 TA 255
TA
Sbjct: 61 TA 62
>AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB,
isoform B protein.
Length = 832
Score = 140 bits (339), Expect = 1e-33
Identities = 80/130 (61%), Positives = 90/130 (69%)
Frame = +3
Query: 255 ISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXX 434
ISM+FE+EEKDLVFIT+PDQREK KGFLINLIDSPGHVDFSSEVTAALRVTDGAL
Sbjct: 63 ISMYFEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVD 122
Query: 435 XXXXXXXQTETVLRQAIAERIKPILS*TKWTVLFLSSNLKLKNYTRTFPGVL*KMLTSL* 614
QTETVLRQAIAERIKPIL K L L + +TF ++ + + +
Sbjct: 123 CVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQLDAEELYQTFQRIV-ENVNVII 181
Query: 615 ATL*PIDGGP 644
AT DGGP
Sbjct: 182 ATY-NDDGGP 190
Score = 126 bits (304), Expect = 3e-29
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 249
MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGA+AGETRFTDTRKDEQ+RCITIKS
Sbjct: 1 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAKAGETRFTDTRKDEQERCITIKS 60
Query: 250 TA 255
TA
Sbjct: 61 TA 62
>AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-PB
protein.
Length = 1033
Score = 73.3 bits (172), Expect = 3e-13
Identities = 31/60 (51%), Positives = 47/60 (78%)
Frame = +1
Query: 76 KKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTA 255
+++ +RN+ ++AHVDHGK+TL DSLV+ GII+ AG+ R+ D R DEQ+R IT+KS++
Sbjct: 15 RRQQVRNICILAHVDHGKTTLADSLVASNGIISQRMAGKLRYLDNRSDEQERGITMKSSS 74
Score = 67.3 bits (157), Expect = 2e-11
Identities = 34/72 (47%), Positives = 43/72 (59%)
Frame = +3
Query: 336 FLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILS* 515
+LINLIDSPGHVDFSSEV+ A+R+ DGA+ QT LRQ E++KP+L
Sbjct: 91 YLINLIDSPGHVDFSSEVSTAVRLCDGAIVVVDVVEGVGPQTRACLRQIYEEQLKPVLVL 150
Query: 516 TKWTVLFLSSNL 551
K L L +
Sbjct: 151 NKLDRLILEKQM 162
>AY058769-1|AAL13998.1| 949|Drosophila melanogaster SD04694p
protein.
Length = 949
Score = 67.3 bits (157), Expect = 2e-11
Identities = 34/72 (47%), Positives = 43/72 (59%)
Frame = +3
Query: 336 FLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILS* 515
+LINLIDSPGHVDFSSEV+ A+R+ DGA+ QT LRQ E++KP+L
Sbjct: 7 YLINLIDSPGHVDFSSEVSTAVRLCDGAIVVVDVVEGVGPQTRACLRQIYEEQLKPVLVL 66
Query: 516 TKWTVLFLSSNL 551
K L L +
Sbjct: 67 NKLDRLILEKQM 78
>BT003756-1|AAO41435.1| 674|Drosophila melanogaster RE71343p
protein.
Length = 674
Score = 56.0 bits (129), Expect = 4e-08
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +3
Query: 315 REKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAER 494
++ +K +L+N+ D+PGHV+FS E TAA+R++DG + TE +L+ A+ ER
Sbjct: 193 QDVKQKSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLNTERLLKHAVQER 252
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = +1
Query: 43 FTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKA-GIIAGARAGETRFTDTRKD 219
+ ++ + +MD IRN++++ H+ HGK+T D L+ + + R+TDT
Sbjct: 116 YDMEFMADLMDTPPLIRNVALVGHLHHGKTTFVDCLIRQTHPQFETMEERQLRYTDTLFT 175
Query: 220 EQDRCITIKST-ASLCSSSLKRK 285
EQ+R +IK+T +L +K+K
Sbjct: 176 EQERGCSIKATPVTLVLQDVKQK 198
>AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p
protein.
Length = 975
Score = 56.0 bits (129), Expect = 4e-08
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +3
Query: 315 REKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAER 494
++ +K +L+N+ D+PGHV+FS E TAA+R++DG + TE +L+ A+ ER
Sbjct: 193 QDVKQKSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLNTERLLKHAVQER 252
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = +1
Query: 43 FTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKA-GIIAGARAGETRFTDTRKD 219
+ ++ + +MD IRN++++ H+ HGK+T D L+ + + R+TDT
Sbjct: 116 YDMEFMADLMDTPPLIRNVALVGHLHHGKTTFVDCLIRQTHPQFETMEERQLRYTDTLFT 175
Query: 220 EQDRCITIKST-ASLCSSSLKRK 285
EQ+R +IK+T +L +K+K
Sbjct: 176 EQERGCSIKATPVTLVLQDVKQK 198
>AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA
protein.
Length = 975
Score = 56.0 bits (129), Expect = 4e-08
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +3
Query: 315 REKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAER 494
++ +K +L+N+ D+PGHV+FS E TAA+R++DG + TE +L+ A+ ER
Sbjct: 193 QDVKQKSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLNTERLLKHAVQER 252
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = +1
Query: 43 FTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKA-GIIAGARAGETRFTDTRKD 219
+ ++ + +MD IRN++++ H+ HGK+T D L+ + + R+TDT
Sbjct: 116 YDMEFMADLMDTPPLIRNVALVGHLHHGKTTFVDCLIRQTHPQFETMEERQLRYTDTLFT 175
Query: 220 EQDRCITIKST-ASLCSSSLKRK 285
EQ+R +IK+T +L +K+K
Sbjct: 176 EQERGCSIKATPVTLVLQDVKQK 198
>BT003552-1|AAO39556.1| 676|Drosophila melanogaster LP12382p
protein.
Length = 676
Score = 55.6 bits (128), Expect = 5e-08
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +1
Query: 88 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS-TASL 261
IRN S+IAHVDHGKSTL D L+ G IA G+ + D + E++R IT+K+ TAS+
Sbjct: 79 IRNFSIIAHVDHGKSTLADRLLELTGAIA-RNGGQHQVLDNLQVERERGITVKAQTASI 136
Score = 43.2 bits (97), Expect = 3e-04
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = +3
Query: 336 FLINLIDSPGHVDFSSEVTAALRVTDGAL 422
+L+NLID+PGHVDFS+EV+ +L DG +
Sbjct: 145 YLLNLIDTPGHVDFSNEVSRSLAACDGVV 173
>AF017777-7|AAC28402.1| 679|Drosophila melanogaster waclaw protein.
Length = 679
Score = 55.6 bits (128), Expect = 5e-08
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +1
Query: 88 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS-TASL 261
IRN S+IAHVDHGKSTL D L+ G IA G+ + D + E++R IT+K+ TAS+
Sbjct: 99 IRNFSIIAHVDHGKSTLADRLLELTGAIA-RNGGQHQVLDNLQVERERGITVKAQTASI 156
Score = 43.2 bits (97), Expect = 3e-04
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = +3
Query: 336 FLINLIDSPGHVDFSSEVTAALRVTDGAL 422
+L+NLID+PGHVDFS+EV+ +L DG +
Sbjct: 165 YLLNLIDTPGHVDFSNEVSRSLAACDGVV 193
>AE014298-3127|AAF50824.2| 696|Drosophila melanogaster CG1410-PA,
isoform A protein.
Length = 696
Score = 55.6 bits (128), Expect = 5e-08
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +1
Query: 88 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS-TASL 261
IRN S+IAHVDHGKSTL D L+ G IA G+ + D + E++R IT+K+ TAS+
Sbjct: 99 IRNFSIIAHVDHGKSTLADRLLELTGAIA-RNGGQHQVLDNLQVERERGITVKAQTASI 156
Score = 43.2 bits (97), Expect = 3e-04
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = +3
Query: 336 FLINLIDSPGHVDFSSEVTAALRVTDGAL 422
+L+NLID+PGHVDFS+EV+ +L DG +
Sbjct: 165 YLLNLIDTPGHVDFSNEVSRSLAACDGVV 193
>AE014134-1251|AAF52495.2| 745|Drosophila melanogaster CG4567-PA
protein.
Length = 745
Score = 48.8 bits (111), Expect = 6e-06
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +3
Query: 342 INLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQ 479
IN+ID+PGHVDF+ EV ALRV DGA+ QT TV RQ
Sbjct: 112 INIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQ 157
Score = 36.3 bits (80), Expect = 0.036
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Frame = +1
Query: 88 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAR--AGETRF---TDTRKDEQDRCITIKST 252
IRN+ + AH+D GK+TLT+ ++ G IA G+ D+ + E+ R ITI+S
Sbjct: 42 IRNIGISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGATMDSMELERQRGITIQSA 101
Query: 253 AS 258
A+
Sbjct: 102 AT 103
>BT023763-1|AAZ41771.1| 639|Drosophila melanogaster RE37786p
protein.
Length = 639
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/46 (52%), Positives = 29/46 (63%)
Frame = +3
Query: 342 INLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQ 479
IN+ID+PGHVDF+ EV ALRV DGA+ +T TV RQ
Sbjct: 112 INIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSETLTVNRQ 157
Score = 36.3 bits (80), Expect = 0.036
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Frame = +1
Query: 88 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAR--AGETRF---TDTRKDEQDRCITIKST 252
IRN+ + AH+D GK+TLT+ ++ G IA G+ D+ + E+ R ITI+S
Sbjct: 42 IRNIGISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGATMDSMELERQRGITIQSA 101
Query: 253 AS 258
A+
Sbjct: 102 AT 103
>AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-PA
protein.
Length = 692
Score = 42.3 bits (95), Expect = 5e-04
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 342 INLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPIL 509
INL+D+PGH+DF+ EV +L DG + QT TV QA ++ ++
Sbjct: 100 INLLDTPGHIDFTMEVEQSLYAVDGVVVVLDGTAGVEAQTVTVWSQADKHKLPRLI 155
Score = 39.5 bits (88), Expect = 0.004
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 88 IRNMSVIAHVDHGKSTLTDSLVSKAG---IIAGARAGETRFTDTRKDEQDRCITIKSTA 255
IRN+ ++AH+D GK+T T+ ++ AG + G T TD E++R ITI S+A
Sbjct: 33 IRNIGILAHIDAGKTTTTERMLFYAGKTRALGEVHRGNT-VTDYLTQERERGITICSSA 90
>AY119138-1|AAM50998.1| 696|Drosophila melanogaster RE37995p
protein.
Length = 696
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 97 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 198
++V+ HVDHGK+TL DSL A + AG G T+
Sbjct: 165 VTVMGHVDHGKTTLLDSL-RGADVAAGEAGGITQ 197
>AE014297-4239|AAF56796.2| 696|Drosophila melanogaster CG12413-PA
protein.
Length = 696
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 97 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 198
++V+ HVDHGK+TL DSL A + AG G T+
Sbjct: 165 VTVMGHVDHGKTTLLDSL-RGADVAAGEAGGITQ 197
>BT003749-1|AAO41413.1| 489|Drosophila melanogaster RH68252p
protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.25
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 94 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITI 243
N+ I HVDHGK+TLT ++ A + + D +E+ R ITI
Sbjct: 84 NVGTIGHVDHGKTTLTAAITKVLADKQLAESKKYNEIDNAPEEKARGITI 133
>AY058493-1|AAL13722.1| 300|Drosophila melanogaster GM14682p
protein.
Length = 300
Score = 33.5 bits (73), Expect = 0.25
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 94 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITI 243
N+ I HVDHGK+TLT ++ A + + D +E+ R ITI
Sbjct: 84 NVGTIGHVDHGKTTLTAAITKVLADKQLAESKKYNEIDNAPEEKARGITI 133
>AE013599-1732|AAF58366.1| 489|Drosophila melanogaster CG6050-PA
protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.25
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 94 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITI 243
N+ I HVDHGK+TLT ++ A + + D +E+ R ITI
Sbjct: 84 NVGTIGHVDHGKTTLTAAITKVLADKQLAESKKYNEIDNAPEEKARGITI 133
>X06870-1|CAA29994.1| 462|Drosophila melanogaster EF-1-alpha
protein.
Length = 462
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 70 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 165
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
>X06869-1|CAA29993.1| 463|Drosophila melanogaster EF-1-alpha
protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 70 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 165
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
>M11744-1|AAA28526.1| 463|Drosophila melanogaster protein (
D.melanogaster 50 kDaprotein F1 gene, complete cds. ).
Length = 463
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 70 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 165
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
>BT015202-1|AAT94431.1| 462|Drosophila melanogaster RE68984p
protein.
Length = 462
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 70 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 165
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
>BT011039-1|AAR30199.1| 463|Drosophila melanogaster LP10071p
protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 70 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 165
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
>AE014297-4793|AAS65236.1| 462|Drosophila melanogaster CG1873-PD,
isoform D protein.
Length = 462
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 70 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 165
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
>AE014297-4792|AAS65235.1| 462|Drosophila melanogaster CG1873-PC,
isoform C protein.
Length = 462
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 70 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 165
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
>AE014297-4791|AAN14285.1| 462|Drosophila melanogaster CG1873-PB,
isoform B protein.
Length = 462
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 70 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 165
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
>AE014297-4790|AAF57185.1| 462|Drosophila melanogaster CG1873-PA,
isoform A protein.
Length = 462
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 70 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 165
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
>AE013599-1358|AAM68698.1| 463|Drosophila melanogaster CG8280-PB,
isoform B protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 70 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 165
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
>AE013599-1357|AAF58608.1| 463|Drosophila melanogaster CG8280-PA,
isoform A protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 70 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 165
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
>AE014297-3800|AAN14054.2| 881|Drosophila melanogaster CG31439-PA
protein.
Length = 881
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 472 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTC 365
+T + CT T T +TTT + T + A T+ +TC
Sbjct: 537 TTTTTCTPTTTTTTTTTTTTTTTTTTATTTPTTTTC 572
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 472 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTC 365
+T + CT T T +TTT + T + T+ +TC
Sbjct: 455 TTTTTCTPTTTTTTTTTTTTTTTTTTTTTTTTTTTC 490
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 472 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTC 365
+T + CT T T +TTT + T + T+ +TC
Sbjct: 594 TTTTTCTPTTTTTTTTTTTTTTTTTTTTTTTTTTTC 629
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 472 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKP 332
+T + CT P T +TTT AP T S+ T+ +TC ++I P
Sbjct: 720 TTTTTCT--PTTTTTTTCAP--TTSSTTTTSTTTTCTSKTISTTTCP 762
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 472 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTC 365
+T + T T T +TTT AP+ T + T+ +TC
Sbjct: 700 TTTTTTTTTTTTTTTTTCAPTTTTTCTPTTTTTTTC 735
>BT010319-1|AAQ23637.1| 456|Drosophila melanogaster AT01345p
protein.
Length = 456
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 94 NMSVIAHVDHGKSTLTDSL 150
N+ I HVDHGK+TLT ++
Sbjct: 59 NVGTIGHVDHGKTTLTAAI 77
>AY058330-1|AAL13559.1| 456|Drosophila melanogaster GH10272p
protein.
Length = 456
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 94 NMSVIAHVDHGKSTLTDSL 150
N+ I HVDHGK+TLT ++
Sbjct: 59 NVGTIGHVDHGKTTLTAAI 77
>AE013599-436|AAF59240.1| 456|Drosophila melanogaster CG12736-PA
protein.
Length = 456
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 94 NMSVIAHVDHGKSTLTDSL 150
N+ I HVDHGK+TLT ++
Sbjct: 59 NVGTIGHVDHGKTTLTAAI 77
>BT003766-1|AAO41445.1| 670|Drosophila melanogaster RE29053p
protein.
Length = 670
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 73 DKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIA 174
D+K +I +M VI HVD GKSTL L+ G ++
Sbjct: 243 DQKSHI-HMIVIGHVDAGKSTLMGHLLYDTGNVS 275
>AE014296-376|AAF47584.2| 670|Drosophila melanogaster CG1898-PA
protein.
Length = 670
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 73 DKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIA 174
D+K +I +M VI HVD GKSTL L+ G ++
Sbjct: 243 DQKSHI-HMIVIGHVDAGKSTLMGHLLYDTGNVS 275
>U88868-1|AAC24943.1| 619|Drosophila melanogaster elongation factor
1 alpha-likefactor protein.
Length = 619
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 79 KRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 171
KR N+ I HVD GKST+ ++S G++
Sbjct: 192 KREHVNVVFIGHVDAGKSTIGGQIMSLTGMV 222
>DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut
protein.
Length = 2176
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 424 TRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLF 320
T APS+T S +TS S+ ES+++ P +F
Sbjct: 638 TAAPSITISVDITSSGSSSSSSESVEVFTTPAPVF 672
>DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker
protein.
Length = 2165
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 424 TRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLF 320
T APS+T S +TS S+ ES+++ P +F
Sbjct: 627 TAAPSITISVDITSSGSSSSSSESVEVFTTPAPVF 661
>AY070979-1|AAL48601.1| 619|Drosophila melanogaster RE07731p
protein.
Length = 619
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 79 KRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 171
KR N+ I HVD GKST+ ++S G++
Sbjct: 192 KREHVNVVFIGHVDAGKSTIGGQIMSLTGMV 222
>AE014297-2514|AAF55548.1| 935|Drosophila melanogaster CG14309-PA
protein.
Length = 935
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 172 AGARAGETRFTDTRKDEQDRCITIKSTASLCSSSL 276
A A +G F +EQ IT+KST+SL SS +
Sbjct: 299 ANAVSGGLAFMVVNTEEQPTTITVKSTSSLSSSEI 333
>AE014134-2205|AAF53194.1| 619|Drosophila melanogaster CG6382-PA
protein.
Length = 619
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 79 KRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 171
KR N+ I HVD GKST+ ++S G++
Sbjct: 192 KREHVNVVFIGHVDAGKSTIGGQIMSLTGMV 222
>AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB
protein.
Length = 1984
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 424 TRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLF 320
T APS+T S +TS S+ ES+++ P +F
Sbjct: 431 TAAPSITISVDITSSGSSSSSSESVEVFTTPAPVF 465
>AY069640-1|AAL39785.1| 396|Drosophila melanogaster LD40702p
protein.
Length = 396
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 421 RAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVM 296
R+ +A VT+ K+ S L KPF+L WSG ++
Sbjct: 312 RSSGAPIAATVTTARKAVTIAFSFVLFSKPFTLQYLWSGLIV 353
>AE014296-2869|AAF49373.2| 396|Drosophila melanogaster CG7853-PA
protein.
Length = 396
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 421 RAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVM 296
R+ +A VT+ K+ S L KPF+L WSG ++
Sbjct: 312 RSSGAPIAATVTTARKAVTIAFSFVLFSKPFTLQYLWSGLIV 353
>AB242867-1|BAF02844.1| 396|Drosophila melanogaster PAPS
transporter protein.
Length = 396
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 421 RAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVM 296
R+ +A VT+ K+ S L KPF+L WSG ++
Sbjct: 312 RSSGAPIAATVTTARKAVTIAFSFVLFSKPFTLQYLWSGLIV 353
>DQ138932-1|ABA86538.1| 1387|Drosophila melanogaster CG12105 protein.
Length = 1387
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 469 TVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIK 338
+ S CT STT + R A +EEK T E + + K
Sbjct: 910 STSTCTSPRAASSTTKDCIGIARETASIAEEKETATSEQLAMPK 953
>AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-PA,
isoform A protein.
Length = 1853
Score = 28.3 bits (60), Expect = 9.5
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 466 VSVCTHTPDTQSTTTRAPSVTRSAAVTSEE-KSTCP 362
VS T T T STTTR + T ++ T+E+ K+T P
Sbjct: 1322 VSTTTTTSITDSTTTRDITTTAASPTTAEDLKTTTP 1357
Score = 28.3 bits (60), Expect = 9.5
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 466 VSVCTHTPDTQSTTTRAPSVTRSAAVTSEE-KSTCP 362
VS T T T STTTR + T ++ T+E+ K+T P
Sbjct: 1397 VSTTTTTSITDSTTTRDITTTAASPTTAEDLKTTTP 1432
>AE013599-3329|AAF46798.2| 1056|Drosophila melanogaster CG11073-PA
protein.
Length = 1056
Score = 28.3 bits (60), Expect = 9.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 472 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKST 368
+T S T T T +TTT AP+ T + T+ +T
Sbjct: 647 TTTSTTTTTTTTTTTTTPAPTTTTTTTTTTPRTTT 681
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,188,487
Number of Sequences: 53049
Number of extensions: 608681
Number of successful extensions: 2070
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2049
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -