Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30568
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.62 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.62 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   5.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   5.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   5.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   5.8  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.6  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = +1

Query: 490 LEH*SNLRKYVLRPEDIVSTTFIANIALDIGTSCEDTFCLLSP 618
           L H   LRKY+ + ED     +  N   + G    D +  L P
Sbjct: 325 LNHNEQLRKYLCKNEDETKNHYSKNTYNEQGNKLADLYKSLGP 367


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = +1

Query: 490 LEH*SNLRKYVLRPEDIVSTTFIANIALDIGTSCEDTFCLLSP 618
           L H   LRKY+ + ED     +  N   + G    D +  L P
Sbjct: 217 LNHNEQLRKYLCKNEDETKNHYSKNTYNEQGNKLADLYKSLGP 259


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 351 NSLPSKLG*GVNFGDGSYGASS 286
           N+ PS      NF + S GASS
Sbjct: 129 NNTPSATNNNTNFNNNSNGASS 150


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory
          receptor candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 32 NGSEVFSFLWASLT 73
          NG +VF F W  LT
Sbjct: 42 NGKKVFKFAWWPLT 55


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory
          receptor candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 32 NGSEVFSFLWASLT 73
          NG +VF F W  LT
Sbjct: 42 NGKKVFKFAWWPLT 55


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 351 NSLPSKLG*GVNFGDGSYGASS 286
           N+ PS      NF + S GASS
Sbjct: 77  NNTPSATNNNTNFNNNSNGASS 98


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 351 NSLPSKLG*GVNFGDGSYGASS 286
           N+ PS      NF + S GASS
Sbjct: 260 NNTPSATNNNTNFNNNSNGASS 281


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 167 DWCSDTRERTARWYRKVEEQIV 232
           D C+   ++T  W  K++EQ V
Sbjct: 299 DACTIASKQTISWCYKLQEQFV 320


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 167 DWCSDTRERTARWYRKVEEQIV 232
           D C+   ++T  W  K++EQ V
Sbjct: 299 DACTIASKQTISWCYKLQEQFV 320


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,356
Number of Sequences: 336
Number of extensions: 4188
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)