Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30565
         (576 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   177   3e-46
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         28   0.25 
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    26   0.76 
DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       26   1.0  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    24   4.1  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   5.4  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   7.1  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   7.1  
AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    23   9.4  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  177 bits (430), Expect = 3e-46
 Identities = 80/85 (94%), Positives = 81/85 (95%)
 Frame = +3

Query: 255 SNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 434
           +NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWP VRGVAMNPVEHPHGGGNHQHIG
Sbjct: 161 ANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 220

Query: 435 KASTVKRGTSAGRKVGLIAARRTGR 509
           KASTVKRGT  GRKVGLIAARRTGR
Sbjct: 221 KASTVKRGTPPGRKVGLIAARRTGR 245



 Score =  150 bits (363), Expect = 4e-38
 Identities = 65/86 (75%), Positives = 76/86 (88%)
 Frame = +1

Query: 10  SRSLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 189
           +  +YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLEEK GDRG+LAR SGN+A+VI 
Sbjct: 79  AEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIA 138

Query: 190 HNPDAKRTRVKLPSGAKKVLPSATEA 267
           HNPD KRTRVKLPSGAKKVLPSA  A
Sbjct: 139 HNPDTKRTRVKLPSGAKKVLPSANRA 164


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 0.25
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 219 KATVWSQEGSAISNRGMVGIVAGGGRIDKPILKAGRAYHK 338
           K  +W    +A + +  +G V GG   D  IL  GRAYH+
Sbjct: 73  KQLIWD---TASAGQVPLGAVVGGHTSDGEILYVGRAYHE 109


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 26.2 bits (55), Expect = 0.76
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +2

Query: 254 QQQRHGRYCCWRWTY 298
           QQQ+HG++CC R ++
Sbjct: 280 QQQQHGQHCCCRGSH 294


>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
 Frame = -1

Query: 174 EVSRGTCQTTSI--THFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEASG 10
           +V R   +TT I  THF FK  H         R     +  CF      + CV  SG
Sbjct: 172 DVLRTRVKTTGIVETHFSFKSIHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSG 228


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 156 CQTTSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLA 28
           C+T SIT  +        LRH      +S ++S +L  ++KLA
Sbjct: 180 CETLSITAKILAEDFQRALRHVGPAAKVSEYRSLWL-RLSKLA 221


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 390 GSWQHHVHMASSYV*PCTCGMPFQLSK*VCQY 295
           GS  H     SSYV    CG P ++    C++
Sbjct: 504 GSEGHKARDCSSYVKCAACGGPHRIGHMSCEH 535


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 178 TVIGHNPDAKRTRVKLPSGAKKVLPSATEAWSVLLLEV 291
           +V G NPDAKR    L S   K++         L +++
Sbjct: 16  SVCGGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKI 53


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 304 LSIRPPPATIPTM 266
           + +RPPP  +PTM
Sbjct: 114 MGMRPPPMMVPTM 126


>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -2

Query: 257 ADGRTFLAPDGS 222
           ADG +FLAP GS
Sbjct: 20  ADGGSFLAPSGS 31


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,093
Number of Sequences: 2352
Number of extensions: 14601
Number of successful extensions: 35
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)