Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30565
(576 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 165 7e-41
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 165 7e-41
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 165 7e-41
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 165 7e-41
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 165 7e-41
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 165 7e-41
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 165 7e-41
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 165 7e-41
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 165 7e-41
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 97 3e-20
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 33 0.72
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 33 0.72
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 33 0.72
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 33 0.72
AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens ... 31 2.2
BC009975-1|AAH09975.1| 575|Homo sapiens WSCD1 protein protein. 30 5.1
BC072021-1|AAH72021.1| 227|Homo sapiens CTBP1 protein protein. 29 8.9
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 165 bits (402), Expect = 7e-41
Identities = 73/95 (76%), Positives = 81/95 (85%)
Frame = +3
Query: 255 SNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 434
+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIG
Sbjct: 161 ANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIG 220
Query: 435 KASTVKRGTSAGRKVGLIAARRTGRFVEARPIQRR 539
K ST++R AGRKVGLIAARRTGR + +Q +
Sbjct: 221 KPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEK 255
Score = 142 bits (343), Expect = 1e-33
Identities = 63/86 (73%), Positives = 74/86 (86%)
Frame = +1
Query: 10 SRSLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 189
+ ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 79 AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 138
Query: 190 HNPDAKRTRVKLPSGAKKVLPSATEA 267
HNP+ K+TRVKLPSG+KKV+ SA A
Sbjct: 139 HNPETKKTRVKLPSGSKKVISSANRA 164
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 165 bits (402), Expect = 7e-41
Identities = 73/95 (76%), Positives = 81/95 (85%)
Frame = +3
Query: 255 SNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 434
+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIG
Sbjct: 161 ANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIG 220
Query: 435 KASTVKRGTSAGRKVGLIAARRTGRFVEARPIQRR 539
K ST++R AGRKVGLIAARRTGR + +Q +
Sbjct: 221 KPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEK 255
Score = 142 bits (343), Expect = 1e-33
Identities = 63/86 (73%), Positives = 74/86 (86%)
Frame = +1
Query: 10 SRSLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 189
+ ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 79 AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 138
Query: 190 HNPDAKRTRVKLPSGAKKVLPSATEA 267
HNP+ K+TRVKLPSG+KKV+ SA A
Sbjct: 139 HNPETKKTRVKLPSGSKKVISSANRA 164
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 165 bits (402), Expect = 7e-41
Identities = 73/95 (76%), Positives = 81/95 (85%)
Frame = +3
Query: 255 SNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 434
+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIG
Sbjct: 161 ANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIG 220
Query: 435 KASTVKRGTSAGRKVGLIAARRTGRFVEARPIQRR 539
K ST++R AGRKVGLIAARRTGR + +Q +
Sbjct: 221 KPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEK 255
Score = 142 bits (344), Expect = 8e-34
Identities = 64/86 (74%), Positives = 74/86 (86%)
Frame = +1
Query: 10 SRSLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 189
+ ++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 79 AEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 138
Query: 190 HNPDAKRTRVKLPSGAKKVLPSATEA 267
HNP+ K+TRVKLPSG+KKV+ SA A
Sbjct: 139 HNPETKKTRVKLPSGSKKVISSANRA 164
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 165 bits (402), Expect = 7e-41
Identities = 73/95 (76%), Positives = 81/95 (85%)
Frame = +3
Query: 255 SNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 434
+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIG
Sbjct: 161 ANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIG 220
Query: 435 KASTVKRGTSAGRKVGLIAARRTGRFVEARPIQRR 539
K ST++R AGRKVGLIAARRTGR + +Q +
Sbjct: 221 KPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEK 255
Score = 142 bits (343), Expect = 1e-33
Identities = 63/86 (73%), Positives = 74/86 (86%)
Frame = +1
Query: 10 SRSLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 189
+ ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 79 AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 138
Query: 190 HNPDAKRTRVKLPSGAKKVLPSATEA 267
HNP+ K+TRVKLPSG+KKV+ SA A
Sbjct: 139 HNPETKKTRVKLPSGSKKVISSANRA 164
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 165 bits (402), Expect = 7e-41
Identities = 73/95 (76%), Positives = 81/95 (85%)
Frame = +3
Query: 255 SNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 434
+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIG
Sbjct: 161 ANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIG 220
Query: 435 KASTVKRGTSAGRKVGLIAARRTGRFVEARPIQRR 539
K ST++R AGRKVGLIAARRTGR + +Q +
Sbjct: 221 KPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEK 255
Score = 142 bits (344), Expect = 8e-34
Identities = 64/86 (74%), Positives = 74/86 (86%)
Frame = +1
Query: 10 SRSLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 189
+ ++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 79 AEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 138
Query: 190 HNPDAKRTRVKLPSGAKKVLPSATEA 267
HNP+ K+TRVKLPSG+KKV+ SA A
Sbjct: 139 HNPETKKTRVKLPSGSKKVISSANRA 164
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 165 bits (402), Expect = 7e-41
Identities = 73/95 (76%), Positives = 81/95 (85%)
Frame = +3
Query: 255 SNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 434
+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIG
Sbjct: 161 ANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIG 220
Query: 435 KASTVKRGTSAGRKVGLIAARRTGRFVEARPIQRR 539
K ST++R AGRKVGLIAARRTGR + +Q +
Sbjct: 221 KPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEK 255
Score = 142 bits (344), Expect = 8e-34
Identities = 64/86 (74%), Positives = 74/86 (86%)
Frame = +1
Query: 10 SRSLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 189
+ ++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 79 AEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 138
Query: 190 HNPDAKRTRVKLPSGAKKVLPSATEA 267
HNP+ K+TRVKLPSG+KKV+ SA A
Sbjct: 139 HNPETKKTRVKLPSGSKKVISSANRA 164
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 165 bits (402), Expect = 7e-41
Identities = 73/95 (76%), Positives = 81/95 (85%)
Frame = +3
Query: 255 SNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 434
+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIG
Sbjct: 161 ANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIG 220
Query: 435 KASTVKRGTSAGRKVGLIAARRTGRFVEARPIQRR 539
K ST++R AGRKVGLIAARRTGR + +Q +
Sbjct: 221 KPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEK 255
Score = 142 bits (343), Expect = 1e-33
Identities = 63/86 (73%), Positives = 74/86 (86%)
Frame = +1
Query: 10 SRSLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 189
+ ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 79 AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 138
Query: 190 HNPDAKRTRVKLPSGAKKVLPSATEA 267
HNP+ K+TRVKLPSG+KKV+ SA A
Sbjct: 139 HNPETKKTRVKLPSGSKKVISSANRA 164
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 165 bits (402), Expect = 7e-41
Identities = 73/95 (76%), Positives = 81/95 (85%)
Frame = +3
Query: 255 SNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 434
+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIG
Sbjct: 115 ANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIG 174
Query: 435 KASTVKRGTSAGRKVGLIAARRTGRFVEARPIQRR 539
K ST++R AGRKVGLIAARRTGR + +Q +
Sbjct: 175 KPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEK 209
Score = 142 bits (343), Expect = 1e-33
Identities = 63/86 (73%), Positives = 74/86 (86%)
Frame = +1
Query: 10 SRSLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 189
+ ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 33 AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 92
Query: 190 HNPDAKRTRVKLPSGAKKVLPSATEA 267
HNP+ K+TRVKLPSG+KKV+ SA A
Sbjct: 93 HNPETKKTRVKLPSGSKKVISSANRA 118
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 165 bits (402), Expect = 7e-41
Identities = 73/95 (76%), Positives = 81/95 (85%)
Frame = +3
Query: 255 SNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 434
+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIG
Sbjct: 161 ANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIG 220
Query: 435 KASTVKRGTSAGRKVGLIAARRTGRFVEARPIQRR 539
K ST++R AGRKVGLIAARRTGR + +Q +
Sbjct: 221 KPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEK 255
Score = 142 bits (343), Expect = 1e-33
Identities = 63/86 (73%), Positives = 74/86 (86%)
Frame = +1
Query: 10 SRSLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 189
+ ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 79 AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 138
Query: 190 HNPDAKRTRVKLPSGAKKVLPSATEA 267
HNP+ K+TRVKLPSG+KKV+ SA A
Sbjct: 139 HNPETKKTRVKLPSGSKKVISSANRA 164
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 97.5 bits (232), Expect = 3e-20
Identities = 42/56 (75%), Positives = 49/56 (87%)
Frame = +1
Query: 10 SRSLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFA 177
+ ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+A
Sbjct: 75 AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 33.1 bits (72), Expect = 0.72
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 70 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 186
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 33.1 bits (72), Expect = 0.72
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 70 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 186
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 33.1 bits (72), Expect = 0.72
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 70 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 186
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 176 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 214
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 33.1 bits (72), Expect = 0.72
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 70 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 186
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42789 fis, clone BRAWH3007221. ).
Length = 163
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 355 LRLTLYLWYAL-PAFKIGLSIRPPPATIPTMPLLLMAEPSW 236
L LT +L+ A P F++ +S+ PPP ++P P + P W
Sbjct: 87 LFLTHFLYLAASPCFRLSVSLFPPPLSLPRSP--ISVSPPW 125
>BC009975-1|AAH09975.1| 575|Homo sapiens WSCD1 protein protein.
Length = 575
Score = 30.3 bits (65), Expect = 5.1
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Frame = +1
Query: 4 HCSRSLYTGQFVYCGKKATLE--VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFA 177
HC + +VY G +A E GN +P A+ G CN E K G++G + A +
Sbjct: 173 HCQDACAERSYVYAGLEAGAECYCGNRLP--AVSVGLEECNYECK-GEKGSVCGAVDRLS 229
Query: 178 T--VIGHNPDAKRTRVKLPSGAKKVLPSATEAWSVLLLEVDV 297
V P +++ R G ++ + T A+ L++ +V
Sbjct: 230 VYRVDELQPGSRKRRTATYRGCFRLPENITHAFPSSLIQANV 271
>BC072021-1|AAH72021.1| 227|Homo sapiens CTBP1 protein protein.
Length = 227
Score = 29.5 bits (63), Expect = 8.9
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 396 EHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRTGR 509
E HGGG Q G++S +RG R G AARR+GR
Sbjct: 5 ETRHGGGQAQAGGRSSGRRRGRPTRRARG-GAARRSGR 41
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,336,666
Number of Sequences: 237096
Number of extensions: 2172970
Number of successful extensions: 4978
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4974
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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