Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30565
(576 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical pr... 161 3e-40
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 36 0.021
Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 31 0.78
U58746-4|AAB00624.1| 751|Caenorhabditis elegans Phospholipase c... 28 4.1
Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical p... 28 5.5
Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical p... 28 5.5
Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical pr... 28 5.5
U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein. 28 5.5
AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein. 28 5.5
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 27 7.2
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 27 7.2
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 27 7.2
AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homo... 27 7.2
AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q... 27 7.2
AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical ... 27 7.2
Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical pr... 27 9.5
U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical p... 27 9.5
L11247-6|AAA28005.2| 367|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical
protein B0250.1 protein.
Length = 260
Score = 161 bits (391), Expect = 3e-40
Identities = 70/92 (76%), Positives = 79/92 (85%)
Frame = +3
Query: 258 NRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGK 437
NR M+G+VAGGGR DKP+LKAGR+YHKYK KRN WP VRGVAMNPVEHPHGGGNHQHIG
Sbjct: 162 NRAMIGLVAGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRGVAMNPVEHPHGGGNHQHIGH 221
Query: 438 ASTVKRGTSAGRKVGLIAARRTGRFVEARPIQ 533
STV+R SAG+KVGLIAARRTGR +P++
Sbjct: 222 PSTVRRDASAGKKVGLIAARRTGRIRGGKPVK 253
Score = 130 bits (313), Expect = 9e-31
Identities = 52/86 (60%), Positives = 71/86 (82%)
Frame = +1
Query: 10 SRSLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 189
+ ++TGQF++CG KA +++GN++PVG +PEGT +CN+E K GDRG +ARASGN+ATVI
Sbjct: 79 AEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKSGDRGVIARASGNYATVIA 138
Query: 190 HNPDAKRTRVKLPSGAKKVLPSATEA 267
HNPD K+TR++LPSGAKKV+ S A
Sbjct: 139 HNPDTKKTRIRLPSGAKKVVQSVNRA 164
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 35.9 bits (79), Expect = 0.021
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 70 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 228
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical
protein T24B8.1 protein.
Length = 134
Score = 30.7 bits (66), Expect = 0.78
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 184 IGHNPDAKRTRVKLPSGAKKVLPSATEAWSVLLLE 288
IGH D +RTR LP+G KKVL + +LL++
Sbjct: 57 IGHGSD-RRTRFVLPNGYKKVLVQNVKDLDMLLMQ 90
>U58746-4|AAB00624.1| 751|Caenorhabditis elegans Phospholipase c
protein 4 protein.
Length = 751
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -2
Query: 308 RFVNTSTSSNNTDHASVADGRTFLAPDGSFTLVRL 204
RFV T SS+N + +VAD + FL + F V L
Sbjct: 233 RFVMTQASSDNVETLTVADLQRFLTEEQGFENVDL 267
>Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical
protein F58A3.2c protein.
Length = 1158
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 224 YRLEPRRFCHQQQRHGRYCCWR 289
YR+EP C Q+ H CWR
Sbjct: 892 YRMEPPHLCPQEVYHLMCSCWR 913
>Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical
protein F58A3.2e protein.
Length = 1051
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 224 YRLEPRRFCHQQQRHGRYCCWR 289
YR+EP C Q+ H CWR
Sbjct: 892 YRMEPPHLCPQEVYHLMCSCWR 913
>Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical
protein F58A3.2d protein.
Length = 1096
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 224 YRLEPRRFCHQQQRHGRYCCWR 289
YR+EP C Q+ H CWR
Sbjct: 892 YRMEPPHLCPQEVYHLMCSCWR 913
>Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical
protein F58A3.2b protein.
Length = 988
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 224 YRLEPRRFCHQQQRHGRYCCWR 289
YR+EP C Q+ H CWR
Sbjct: 839 YRMEPPHLCPQEVYHLMCSCWR 860
>Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical
protein F58A3.2a protein.
Length = 1040
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 224 YRLEPRRFCHQQQRHGRYCCWR 289
YR+EP C Q+ H CWR
Sbjct: 891 YRMEPPHLCPQEVYHLMCSCWR 912
>U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.
Length = 1040
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 224 YRLEPRRFCHQQQRHGRYCCWR 289
YR+EP C Q+ H CWR
Sbjct: 891 YRMEPPHLCPQEVYHLMCSCWR 912
>AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein.
Length = 987
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 224 YRLEPRRFCHQQQRHGRYCCWR 289
YR+EP C Q+ H CWR
Sbjct: 838 YRMEPPHLCPQEVYHLMCSCWR 859
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +3
Query: 330 YHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTS 464
Y+K++ + P++ ++ P +H G +GK+ T TS
Sbjct: 414 YNKHQNTHSSMPHIAHISSQPADHSFSGTLDARVGKSVTRDPSTS 458
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 329 CPSSFQNRFVNTSTSSNNTDHASVADGRTFLAPDG 225
CP+ F + + S S N H ADGR L P G
Sbjct: 1501 CPNGFYGWYCSQSCSCQNGAHCDGADGRC-LCPAG 1534
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 329 CPSSFQNRFVNTSTSSNNTDHASVADGRTFLAPDG 225
CP+ F + + S S N H ADGR L P G
Sbjct: 1501 CPNGFYGWYCSQSCSCQNGAHCDGADGRC-LCPAG 1534
>AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homolog
F09G8.2 protein.
Length = 332
Score = 27.5 bits (58), Expect = 7.2
Identities = 23/84 (27%), Positives = 39/84 (46%)
Frame = -1
Query: 252 WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRHSSNRHHI 73
W +L+ + TL++ N SG+ TC +TS TH + ++ G L +S++ H
Sbjct: 209 WNDLISRQN---KVTLAVESWLNGSGDDIHTTCTSTSQTHDVTEMRVTG-LNFASSKDH- 263
Query: 72 SNFKSCFLSTINKLACVEASGAMK 1
S + + S N + C E K
Sbjct: 264 SKW-AVSNSQTNPIVCFEDMNRQK 286
>AF043704-2|AAX88816.1| 407|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 72
protein.
Length = 407
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 295 RPPPATIPTMPLLLMAEPSWLQTVAL 218
RPP T+P+ L L+ EP+ +T+ +
Sbjct: 242 RPPTTTVPSTTLELITEPTSTETIPI 267
>AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical
protein Y32G9B.1 protein.
Length = 394
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 292 PPPATIPTMPLLLMAEPS 239
PPP+T PT+P L PS
Sbjct: 93 PPPSTFPTLPPLTFGTPS 110
>Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical
protein T16G1.8 protein.
Length = 365
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -3
Query: 328 ALPAFKIGLSIRPPPATIPTMPLLL--MAEPSWLQTVAL 218
ALP++ S+ PPP +P+ P + ++ PS+ T ++
Sbjct: 95 ALPSYSTAYSMAPPPLILPSSPSYVAPVSAPSYSLTPSI 133
>Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical
protein T05F1.8 protein.
Length = 393
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -3
Query: 349 LTLYLWYALPAFKIGLSI-RPPPATIP 272
LT W+ +FK+ +++ RPPP +P
Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPQMP 335
>U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical
protein C33F10.12 protein.
Length = 392
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -3
Query: 349 LTLYLWYALPAFKIGLSI-RPPPATIP 272
LT W+ +FK+ +++ RPPP +P
Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPRMP 335
>L11247-6|AAA28005.2| 367|Caenorhabditis elegans Hypothetical
protein F09G8.2 protein.
Length = 367
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -1
Query: 252 WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRHSSNRHH 76
W +L+ + TL++ N SG+ TC +TS TH + ++ G L +S++ H
Sbjct: 234 WNDLISRQN---KVTLAVESWLNGSGDDIHTTCTSTSQTHDVTEMRVTG-LNFASSKDH 288
>AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical
protein Y50E8A.16 protein.
Length = 807
Score = 27.1 bits (57), Expect = 9.5
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Frame = -2
Query: 575 QIFNRLNNKFRSPSLYRSCLHESSGPASSNKTNFATSRCSSLDSGSLTYML--MVTTTVR 402
Q RL + SL+R+ LH+ NKT SR + DS S++ L + TTV
Sbjct: 296 QYAERLTARNIRVSLFRAILHQDISFFDDNKTGQLMSRITK-DSESISNSLPVYIETTVN 354
Query: 401 MLYRVHGNTT----YIWPA-----VTFDLVLV 333
+ + G+ Y W VTF ++L+
Sbjct: 355 NSFMLFGSAPIMFYYSWQLAISTFVTFPIILL 386
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,407,159
Number of Sequences: 27780
Number of extensions: 318322
Number of successful extensions: 974
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -