Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30564
(479 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellu... 141 8e-33
UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28; Eukary... 137 1e-31
UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to ENSANGP000... 136 2e-31
UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15; Fungi/... 125 6e-28
UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2; ... 106 2e-22
UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10; Bi... 105 7e-22
UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4; T... 101 6e-21
UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protei... 98 1e-19
UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, wh... 97 2e-19
UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillar... 87 2e-16
UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative; ... 85 8e-16
UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2; ... 69 5e-11
UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3; Thermoprote... 68 1e-10
UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35; Archa... 68 1e-10
UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2; Thermoprote... 64 2e-09
UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S riboso... 63 4e-09
UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lambl... 62 5e-09
UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;... 61 1e-08
UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15; Archa... 60 2e-08
UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1; Nanoar... 55 1e-06
UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14; Bacter... 51 2e-05
UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15; Campyl... 48 1e-04
UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5; Proteob... 44 0.001
UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1; Encepha... 44 0.002
UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7; Bacteri... 44 0.002
UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18; Bacter... 43 0.004
UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small rib... 42 0.005
UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellu... 42 0.005
UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10; Proteo... 42 0.005
UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4; Mycopla... 41 0.017
UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23; Bacter... 40 0.022
UniRef50_Q73H86 Cluster: 30S ribosomal protein S10; n=2; Wolbach... 38 0.088
UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234; Bacte... 38 0.12
UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellu... 37 0.20
UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast ... 37 0.20
UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispa... 33 2.5
UniRef50_Q7P3J2 Cluster: SSU ribosomal protein S10P; n=1; Fusoba... 32 5.8
UniRef50_A0T870 Cluster: Putative uncharacterized protein; n=2; ... 32 5.8
UniRef50_A5CA29 Cluster: Putative uncharacterized protein; n=1; ... 32 7.7
>UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellular
organisms|Rep: 40S ribosomal protein S20 - Homo sapiens
(Human)
Length = 119
Score = 141 bits (341), Expect = 8e-33
Identities = 66/77 (85%), Positives = 70/77 (90%)
Frame = +1
Query: 220 SQETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQIT 399
++E KGP RMPTK LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQIT
Sbjct: 43 AKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQIT 102
Query: 400 SINIEPGVEVEVTIADA 450
SI+IEPGVEVEVTIADA
Sbjct: 103 SISIEPGVEVEVTIADA 119
Score = 68.9 bits (161), Expect = 5e-11
Identities = 35/50 (70%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGP 253
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGP
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGP 53
>UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28;
Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila
melanogaster (Fruit fly)
Length = 120
Score = 137 bits (332), Expect = 1e-31
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = +1
Query: 244 KGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 423
KGP RMPTK LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGV
Sbjct: 53 KGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGV 112
Query: 424 EVEVTIAD 447
EVEVTIA+
Sbjct: 113 EVEVTIAN 120
Score = 78.2 bits (184), Expect = 9e-14
Identities = 38/50 (76%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGP 253
KDIEKP + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGP
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGP 55
>UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to
ENSANGP00000022492; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000022492 - Nasonia
vitripennis
Length = 483
Score = 136 bits (330), Expect = 2e-31
Identities = 64/78 (82%), Positives = 71/78 (91%)
Frame = +1
Query: 214 QWSQETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQ 393
Q ++ + KGP RMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDL+SPSEIVKQ
Sbjct: 405 QRGKKQKLKVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLYSPSEIVKQ 464
Query: 394 ITSINIEPGVEVEVTIAD 447
ITSI++EPGVEVEVTIA+
Sbjct: 465 ITSISLEPGVEVEVTIAN 482
>UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15;
Fungi/Metazoa group|Rep: 40S ribosomal protein S20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 118
Score = 125 bits (301), Expect = 6e-28
Identities = 57/75 (76%), Positives = 68/75 (90%)
Frame = +1
Query: 220 SQETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQIT 399
+++ + KGP R+PTKIL+ITTRKTP GEGSKTW+ ++MRIHKR+IDLHSPSEIVKQIT
Sbjct: 43 AKDKQLRVKGPVRLPTKILKITTRKTPNGEGSKTWETYEMRIHKRLIDLHSPSEIVKQIT 102
Query: 400 SINIEPGVEVEVTIA 444
SI+IEPGVEVEVTIA
Sbjct: 103 SIHIEPGVEVEVTIA 117
Score = 69.3 bits (162), Expect = 4e-11
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +2
Query: 116 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGP 253
+K Q S +HRIRITLTSRNVR+LEKVC+DL+N AK ++LRVKGP
Sbjct: 8 QKEQQIPSTVHRIRITLTSRNVRNLEKVCSDLVNRAKDKQLRVKGP 53
>UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S20 - Entamoeba histolytica HM-1:IMSS
Length = 118
Score = 106 bits (255), Expect = 2e-22
Identities = 46/68 (67%), Positives = 57/68 (83%)
Frame = +1
Query: 244 KGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 423
KGP R+PTK LRITTRKTPCGEGSKTWD +QMRI+KRV+ + + E VK+ITS+ +EPGV
Sbjct: 51 KGPVRIPTKTLRITTRKTPCGEGSKTWDHYQMRIYKRVLSMKTTPETVKEITSLKVEPGV 110
Query: 424 EVEVTIAD 447
E+EV + D
Sbjct: 111 ELEVAMFD 118
Score = 38.7 bits (86), Expect = 0.067
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +2
Query: 107 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGP 253
KDI+ P I IT+TS V+++E +CA++ KK+ ++VKGP
Sbjct: 6 KDIKAPVTP-KVYKNITITITSTKVKAVESLCAEVKENGKKKGVQVKGP 53
>UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10;
Bilateria|Rep: 40S rRNA protein-like protein -
Schistosoma japonicum (Blood fluke)
Length = 121
Score = 105 bits (251), Expect = 7e-22
Identities = 46/67 (68%), Positives = 54/67 (80%)
Frame = +1
Query: 244 KGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 423
KGP RMPTK+LR+TTRKTPCGEGSKTWDRFQ+RIHKRVIDL S E Q+ I +EPGV
Sbjct: 52 KGPVRMPTKVLRVTTRKTPCGEGSKTWDRFQLRIHKRVIDLLSTDEATLQLKHIYLEPGV 111
Query: 424 EVEVTIA 444
+V ++
Sbjct: 112 NCDVIVS 118
Score = 47.2 bits (107), Expect = 2e-04
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = +2
Query: 89 AAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGP 253
AA+++ K + PQ +S +R+TLT+ +++ LEKV LI AK Q LRVKGP
Sbjct: 2 AAMIAEKKADVPQ--LSTTKWVRVTLTAASIKPLEKVADGLIKKAKDQNLRVKGP 54
>UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4;
Trypanosomatidae|Rep: Ribosomal protein s20, putative -
Leishmania major
Length = 116
Score = 101 bits (243), Expect = 6e-21
Identities = 41/76 (53%), Positives = 60/76 (78%)
Frame = +1
Query: 220 SQETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQIT 399
+++ + GP R+PT+ L+ITTRKTPCG G+ TWD F+++I+KR+IDLH+P+E VK+IT
Sbjct: 40 ARDEKVTIHGPVRLPTRTLKITTRKTPCGNGTNTWDTFELKIYKRIIDLHAPTEQVKKIT 99
Query: 400 SINIEPGVEVEVTIAD 447
S +E GV+V +TI D
Sbjct: 100 SFTMESGVDVSITILD 115
Score = 39.1 bits (87), Expect = 0.051
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +2
Query: 116 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPAACQPR 271
+K QA + +R+T+TSRN +++E V + L+ A+ +K+ + GP R
Sbjct: 5 KKNQAAPAEGQTVRLTITSRNAKAVESVTSQLLTRARDEKVTIHGPVRLPTR 56
>UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protein;
n=5; Eukaryota|Rep: Ribosomal protein S10 containing
protein - Tetrahymena thermophila SB210
Length = 120
Score = 97.9 bits (233), Expect = 1e-19
Identities = 44/66 (66%), Positives = 53/66 (80%)
Frame = +1
Query: 244 KGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 423
KGP RMPTK L IT RK+PCGEGSKTWDRF+MRI+KR+IDL VK IT+ I+PGV
Sbjct: 51 KGPVRMPTKTLVITVRKSPCGEGSKTWDRFEMRIYKRIIDLTCNVPDVKTITNFRIDPGV 110
Query: 424 EVEVTI 441
E+E+T+
Sbjct: 111 EIELTM 116
Score = 45.2 bits (102), Expect = 8e-04
Identities = 21/50 (42%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKK-QKLRVKGP 253
K+ +K + EV + R+RITLT +N++S+EK +++++ AKK +++ VKGP
Sbjct: 5 KETKKGEEEVKKV-RVRITLTCKNLKSVEKATSEIVSRAKKTEQVEVKGP 53
>UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 123
Score = 96.7 bits (230), Expect = 2e-19
Identities = 43/76 (56%), Positives = 52/76 (68%)
Frame = +1
Query: 214 QWSQETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQ 393
Q Q + KGP RMPTK L++T RK+PCGEGSKTWDRF+MRIHKRVID K
Sbjct: 45 QRDQGAQVVFKGPVRMPTKHLKMTVRKSPCGEGSKTWDRFEMRIHKRVIDFQCTLPTFKD 104
Query: 394 ITSINIEPGVEVEVTI 441
IT+ I PG+ VE+ +
Sbjct: 105 ITNFKIGPGINVELNV 120
>UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillardia
theta|Rep: 40S ribosomal protein S20 - Guillardia theta
(Cryptomonas phi)
Length = 116
Score = 87.0 bits (206), Expect = 2e-16
Identities = 34/74 (45%), Positives = 51/74 (68%)
Frame = +1
Query: 220 SQETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQIT 399
++E +GP R+PTK + + RK+PCGEG+ TWD+F+M+IHKR+ID HS IT
Sbjct: 39 NKENNYHIRGPIRIPTKKINLNVRKSPCGEGTNTWDKFEMKIHKRIIDFHSNKSEFNSIT 98
Query: 400 SINIEPGVEVEVTI 441
IN++ G+E++ I
Sbjct: 99 PINLDNGIEIDAQI 112
Score = 37.5 bits (83), Expect = 0.15
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 152 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGP 253
+RITLTS+++ SLEK C ++I K+ ++GP
Sbjct: 16 LRITLTSKHLISLEKACKEIIEKNKENNYHIRGP 49
>UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S10p/S20e, putative - Trichomonas vaginalis G3
Length = 123
Score = 85.0 bits (201), Expect = 8e-16
Identities = 36/66 (54%), Positives = 50/66 (75%)
Frame = +1
Query: 244 KGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 423
+GP MP + LRITTR+ PCG G++T+D F++RI+KRVID +E VKQ+T I +EP V
Sbjct: 55 RGPIPMPRRRLRITTRRAPCGNGTETYDHFELRIYKRVIDFQGTAEAVKQVTQIALEPDV 114
Query: 424 EVEVTI 441
VEV++
Sbjct: 115 HVEVSV 120
Score = 43.2 bits (97), Expect = 0.003
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +2
Query: 83 MAAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGP 253
MA VV D +K E P+ +IR+T+TS + +L++V +L+ KK L V+GP
Sbjct: 1 MADRVVPTGDEKKEIVEDLPVQKIRLTITSSKLPNLQRVVGNLMGKLKKGNLEVRGP 57
>UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2;
Tetrapoda|Rep: Putative uncharacterized protein -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 82
Score = 68.9 bits (161), Expect = 5e-11
Identities = 35/50 (70%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KDIEK-PQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGP 253
KD K P + IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGP
Sbjct: 4 KDAGKAPVDQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGP 53
>UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3;
Thermoprotei|Rep: Ribosomal protein S10 - Cenarchaeum
symbiosum
Length = 102
Score = 68.1 bits (159), Expect = 1e-10
Identities = 25/71 (35%), Positives = 49/71 (69%)
Frame = +1
Query: 223 QETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITS 402
+ T KGP+ +P K L I TRK+PCG G++T+++++MR+H+R+ID+ + + ++++
Sbjct: 29 KRTGVRIKGPTPLPVKKLHIATRKSPCGSGTETYEKWEMRMHRRIIDISADDKTIRRLID 88
Query: 403 INIEPGVEVEV 435
+ I V +E+
Sbjct: 89 LKIPDDVHLEL 99
>UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35;
Archaea|Rep: 30S ribosomal protein S10P - Archaeoglobus
fulgidus
Length = 106
Score = 68.1 bits (159), Expect = 1e-10
Identities = 27/74 (36%), Positives = 46/74 (62%)
Frame = +1
Query: 220 SQETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQIT 399
+ +T GP +PT+ + + RK P GEGS+TWD ++MR+HKR+ID+ + ++QI
Sbjct: 31 ANKTGVELSGPVPLPTRRMVVPVRKAPDGEGSETWDHWEMRVHKRLIDISADERALRQIM 90
Query: 400 SINIEPGVEVEVTI 441
I + V +E+ +
Sbjct: 91 RIQVPRDVNIEIVL 104
>UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2;
Thermoproteales|Rep: Ribosomal protein S10 - Caldivirga
maquilingensis IC-167
Length = 121
Score = 64.1 bits (149), Expect = 2e-09
Identities = 25/66 (37%), Positives = 44/66 (66%)
Frame = +1
Query: 244 KGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 423
+GP +PT+ L +T R+ P G+G T+D ++MRIHKRV+D+ + ++Q+ + I V
Sbjct: 54 RGPIPLPTRRLMVTVRRAPSGQGYHTYDHWEMRIHKRVVDMDADERALRQLMRLRIPEDV 113
Query: 424 EVEVTI 441
+VE+ +
Sbjct: 114 KVEIEL 119
>UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S ribosomal
protein S20; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S20 - Macaca mulatta
Length = 71
Score = 62.9 bits (146), Expect = 4e-09
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +1
Query: 334 QMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 450
+M+IH ++IDL SPSEIVKQITS++IEP VE EVTIADA
Sbjct: 33 KMKIHNQLIDLQSPSEIVKQITSVSIEPEVEAEVTIADA 71
>UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_554_44441_44061 - Giardia lamblia
ATCC 50803
Length = 126
Score = 62.5 bits (145), Expect = 5e-09
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +1
Query: 247 GPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIE-PGV 423
GP R P + L ITTRK+PCGEG+ TW RF++R++KR + + I S + PG+
Sbjct: 55 GPCRAPVRRLTITTRKSPCGEGTNTWHRFELRMYKRTFWVTCGGNDISTILSKTVVIPGI 114
Query: 424 EVEVTIAD 447
+V V + +
Sbjct: 115 QVTVEVEE 122
>UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S10P - Ignicoccus hospitalis KIN4/I
Length = 106
Score = 61.3 bits (142), Expect = 1e-08
Identities = 26/66 (39%), Positives = 43/66 (65%)
Frame = +1
Query: 244 KGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 423
+GP +P K L I+T + P GEG+K +D ++MRIHKR+ID+ ++++ I I + V
Sbjct: 38 RGPVPLPVKRLEISTLRLPHGEGTKVFDHWEMRIHKRLIDVELNDKVMRNIMRIRVPSNV 97
Query: 424 EVEVTI 441
+E+ I
Sbjct: 98 YIEIQI 103
>UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15;
Archaea|Rep: 30S ribosomal protein S10P - Sulfolobus
acidocaldarius
Length = 102
Score = 60.5 bits (140), Expect = 2e-08
Identities = 21/74 (28%), Positives = 44/74 (59%)
Frame = +1
Query: 220 SQETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQIT 399
+Q+T GP +PT + + + P GEG K W+ ++M++HKR+ID+ + +++Q+
Sbjct: 28 AQKTGIQVSGPIPLPTTRMEVPVMRLPHGEGKKKWEHWEMKVHKRIIDIAADERVMRQLM 87
Query: 400 SINIEPGVEVEVTI 441
+ + V +E+ +
Sbjct: 88 RVRVPDDVYIEIEL 101
>UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S10P -
Nanoarchaeum equitans
Length = 109
Score = 54.8 bits (126), Expect = 1e-06
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +1
Query: 223 QETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVK 390
++T +GP +PTKILR+ + G+K WD +QMRIH+R+ID+ + +K
Sbjct: 28 KQTGVKMRGPIPLPTKILRVPVLRITGHRGTKIWDTYQMRIHRRIIDIATDDRTIK 83
>UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14;
Bacteria|Rep: 30S ribosomal protein S10 - Bdellovibrio
bacteriovorus
Length = 105
Score = 50.8 bits (116), Expect = 2e-05
Identities = 24/76 (31%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +1
Query: 220 SQETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS-EIVKQI 396
++ T A GP +PT+I R T ++P + K+ ++F++R HKR++D+ P+ + V Q+
Sbjct: 29 ARRTGAKVAGPIPLPTRINRYTVLRSPHVD-KKSREQFEVRTHKRMLDILEPTQQTVDQL 87
Query: 397 TSINIEPGVEVEVTIA 444
+++ GV+VE+ ++
Sbjct: 88 MKLDLSAGVDVEIKLS 103
>UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15;
Campylobacter|Rep: 30S ribosomal protein S10 -
Campylobacter jejuni
Length = 103
Score = 48.0 bits (109), Expect = 1e-04
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 223 QETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS-EIVKQIT 399
+ T A +GP MPTKI R T K+P + ++F++RIH R++D+ + + + V +T
Sbjct: 28 KRTGADIRGPIPMPTKIKRYTVLKSP-HINKDSREQFEIRIHARMLDIVAATPDTVDSLT 86
Query: 400 SINIEPGVEVEV 435
+++ P V VEV
Sbjct: 87 KLDLAPEVSVEV 98
>UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Neorickettsia sennetsu (strain Miyayama)
Length = 103
Score = 44.4 bits (100), Expect = 0.001
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +1
Query: 235 AACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHS-PSEIVKQITSINI 411
A GP +PT++ R T K+P + K+ ++FQ+ +HK +++L S + ++ T+ +
Sbjct: 32 ALVSGPIPLPTRVSRYTVNKSPHVD-KKSREQFQLAVHKCLLELSSFNAHLLSTFTNFQL 90
Query: 412 EPGVEVEVTIAD 447
GV++ V + D
Sbjct: 91 PAGVDISVEVRD 102
>UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S20
- Encephalitozoon cuniculi
Length = 120
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 259 MPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSP-SEIVKQITSINIEPGVEVEV 435
+P K+ ITT + P G+G+K W R++M +H R L + ++ K + + P VE+ +
Sbjct: 57 LPKKVESITTLRNPSGQGTKKWSRYKMIVHLRNFYLEATHQQLEKVVQFLRNFPHVEINL 116
Query: 436 TI 441
+I
Sbjct: 117 SI 118
>UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7;
Bacteria|Rep: 30S ribosomal protein S10 - Protochlamydia
amoebophila (strain UWE25)
Length = 111
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/73 (27%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +1
Query: 220 SQETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSP-SEIVKQI 396
++ T AA GP +PT + T ++P K+ ++F++R H+R+ID+ +P S+ + +
Sbjct: 38 AKRTGAAIAGPIPLPTSCEKFTVLRSP-NIDRKSREQFEIRTHRRLIDILNPTSKTIDAL 96
Query: 397 TSINIEPGVEVEV 435
++ + GV++++
Sbjct: 97 KTLTLPAGVDIKI 109
>UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18;
Bacteria|Rep: 30S ribosomal protein S10 - Lactobacillus
plantarum
Length = 102
Score = 42.7 bits (96), Expect = 0.004
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +1
Query: 220 SQETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS-EIVKQI 396
++ T A GP +PT+ T ++P + + ++F+MR HKR+ID+ +P+ + V +
Sbjct: 29 AKRTGATISGPIPLPTERTIYTVLRSP-HKFKDSREQFEMRTHKRLIDIVNPTPKTVDSL 87
Query: 397 TSINIEPGVEVEVTI 441
+++ GV++E+ +
Sbjct: 88 MKLDLPSGVDIEIKL 102
>UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small
ribosomal subunit; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Plastid ribosomal protein S10 small
ribosomal subunit - Ostreococcus lucimarinus CCE9901
Length = 136
Score = 42.3 bits (95), Expect = 0.005
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +1
Query: 220 SQETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSP-SEIVKQI 396
++ TEA GP +PTK ++P + + F+ R H R+ID+H P ++ + +
Sbjct: 63 AKATEARVSGPVPLPTKRRIFCVLRSP-HVNKDSREHFETRTHHRLIDVHQPTAQTIDAL 121
Query: 397 TSINIEPGVEVEVTI 441
++ + GV+VE+ +
Sbjct: 122 MALELPSGVDVEIKL 136
>UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellular
organisms|Rep: 30S ribosomal protein S10 - Synechococcus
sp. (strain WH8102)
Length = 106
Score = 42.3 bits (95), Expect = 0.005
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 220 SQETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS-EIVKQI 396
+ +T A GP +PTK ++P + + F+ R H+R+ID++SPS + + +
Sbjct: 33 ADQTAATAIGPIPLPTKRKIYCVLRSPHVDKDSR-EHFETRTHRRIIDIYSPSAKTIDAL 91
Query: 397 TSINIEPGVEVEVTI 441
+++ GV++EV +
Sbjct: 92 MKLDLPSGVDIEVKL 106
>UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Blochmannia floridanus
Length = 103
Score = 42.3 bits (95), Expect = 0.005
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +1
Query: 220 SQETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSE-IVKQI 396
++ T A GP +PTK R T +P D++++R HKR+ID+ P++ V +
Sbjct: 29 AKRTGAQVHGPIPLPTKKERFTILVSP-HVNKDARDQYEIRTHKRLIDIVDPTDKTVDAL 87
Query: 397 TSINIEPGVEVEVTI 441
+++ GV+V++++
Sbjct: 88 MKLDLAAGVDVQISL 102
>UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4;
Mycoplasma|Rep: 30S ribosomal protein S10 - Mycoplasma
penetrans
Length = 102
Score = 40.7 bits (91), Expect = 0.017
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +1
Query: 220 SQETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQ-I 396
SQ++ A KGP +PTK T ++P + ++F+ R H+R+I L + +E K+ +
Sbjct: 28 SQDSGAKVKGPIPLPTKKEIFTICRSP-HVNKTSREQFERRTHQRLIILLNTTEKTKEYL 86
Query: 397 TSINIEPGVEVEVTI 441
+I I GV++++T+
Sbjct: 87 KNIIIPSGVDIQITL 101
>UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Acinetobacter
sp. (strain ADP1)
Length = 103
Score = 40.3 bits (90), Expect = 0.022
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 220 SQETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSE-IVKQI 396
++ T A GP MPT+I R +P D++++R +KR+ID+ P++ V +
Sbjct: 29 AKRTGAQVCGPIPMPTRIERFNVLTSP-HVNKDARDQYEIRTYKRLIDIVQPTDKTVDAL 87
Query: 397 TSINIEPGVEVEVTI 441
+++ GV+V++ +
Sbjct: 88 MKLDLAAGVDVQIAL 102
>UniRef50_Q73H86 Cluster: 30S ribosomal protein S10; n=2;
Wolbachia|Rep: 30S ribosomal protein S10 - Wolbachia
pipientis wMel
Length = 109
Score = 38.3 bits (85), Expect = 0.088
Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 QETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQ-IT 399
+ + A GP +P K + ++P + K+ ++F+MR +R+I LH + + Q +T
Sbjct: 29 KRSSAKLSGPIALPRKDSKFIVNRSPHVD-KKSREQFEMRTSRRLIVLHDLTPTMMQMLT 87
Query: 400 SINIEPGVEVEVTIAD 447
++ GVEV++ + +
Sbjct: 88 GLSFSAGVEVDLKVKE 103
>UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234;
Bacteria|Rep: 30S ribosomal protein S10 - Listeria
innocua
Length = 102
Score = 37.9 bits (84), Expect = 0.12
Identities = 20/75 (26%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 220 SQETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS-EIVKQI 396
++ + A+ GP +PT+ I T + + ++F+MR HKR+ID+ +P+ + V +
Sbjct: 29 AKRSGASVSGPIPLPTE-KSIYTVLRAVHKYKDSREQFEMRTHKRLIDIVNPTPQTVDSL 87
Query: 397 TSINIEPGVEVEVTI 441
+++ GV++E+ +
Sbjct: 88 MRLDLPSGVDIEIKL 102
>UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellular
organisms|Rep: 30S ribosomal protein S10 - Bacteroides
thetaiotaomicron
Length = 101
Score = 37.1 bits (82), Expect = 0.20
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 229 TEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLH-SPSEIVKQITSI 405
T A GP +PT RI T K+ ++F++ +KR+ID++ S ++ V + +
Sbjct: 31 TGAIVSGPIPLPTH-KRIFTVNRSTFVNKKSREQFELSSYKRLIDIYSSTAKTVDALMKL 89
Query: 406 NIEPGVEVEVTI 441
+ GVEVE+ +
Sbjct: 90 ELPSGVEVEIKV 101
>UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast
precursor; n=33; cellular organisms|Rep: 30S ribosomal
protein S10, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 191
Score = 37.1 bits (82), Expect = 0.20
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 220 SQETEAACKGPSRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVID-LHSPSEIVKQI 396
++ T A GP +PTK K+P + F++R H+R+ID L+ ++ + +
Sbjct: 118 ARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF-HFEIRTHQRMIDILYPTAQTIDSL 176
Query: 397 TSINIEPGVEVEVTI 441
+++ GV+VEV +
Sbjct: 177 MQLDLPAGVDVEVKL 191
>UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispar
MNPV|Rep: LdOrf-128 peptide - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 226
Score = 33.5 bits (73), Expect = 2.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 253 SRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRV 357
SR+P ++ + +TPC S W+R ++R+H RV
Sbjct: 7 SRLPLRVY-VDEAETPCWRASADWERGELRLHYRV 40
>UniRef50_Q7P3J2 Cluster: SSU ribosomal protein S10P; n=1;
Fusobacterium nucleatum subsp. vincentii ATCC 49256|Rep:
SSU ribosomal protein S10P - Fusobacterium nucleatum
subsp. vincentii ATCC 49256
Length = 78
Score = 32.3 bits (70), Expect = 5.8
Identities = 16/53 (30%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = +1
Query: 259 MPTKILRITT-RKTPCGEGSKTWDRFQMRIHKRVIDL-HSPSEIVKQITSINI 411
+PT+I + T R + S+ ++F+MR+H+R+I+L +S + + +TS+++
Sbjct: 3 LPTRIRKYTVLRSLHVNKDSR--EQFEMRVHRRMIELVNSTDKAISSLTSVHL 53
>UniRef50_A0T870 Cluster: Putative uncharacterized protein; n=2;
Burkholderia ambifaria|Rep: Putative uncharacterized
protein - Burkholderia ambifaria MC40-6
Length = 325
Score = 32.3 bits (70), Expect = 5.8
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +3
Query: 48 KLFISAGIQQATWQPL*CQAKTLRNPRQRSPLFTASGSLLLLAMCAHSRRSV 203
+ FI+AGI TWQPL T R P + F+ G+L LLA A R S+
Sbjct: 231 RTFIAAGIHPETWQPL----ATARRPAMIA--FSIIGALGLLAFWAWGRMSL 276
>UniRef50_A5CA29 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 188
Score = 31.9 bits (69), Expect = 7.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 193 EGLC*PNQWSQETEAACKGPSR 258
+GLC PN+W T C GP R
Sbjct: 31 DGLCKPNRWLNTTHTCCVGPGR 52
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 486,258,252
Number of Sequences: 1657284
Number of extensions: 9779269
Number of successful extensions: 22378
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 21945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22369
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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