Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30563
         (495 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein prot...    93   2e-19
AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB...    93   2e-19
AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA...    93   2e-19
X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal pr...    92   3e-19
AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p pro...    92   3e-19
BT003783-1|AAO41464.1|  994|Drosophila melanogaster LP02833p pro...    31   0.86 
AE014297-1651|AAF54925.1|  988|Drosophila melanogaster CG8773-PA...    31   0.86 
M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...    29   2.6  
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...    29   2.6  
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...    29   2.6  
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...    29   2.6  
AE013599-3680|AAF47056.1|  157|Drosophila melanogaster CG12491-P...    28   8.0  
AE013599-3679|ABI31112.1|  157|Drosophila melanogaster CG34105-P...    28   8.0  

>X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein
           protein.
          Length = 113

 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 45/63 (71%), Positives = 52/63 (82%)
 Frame = +2

Query: 65  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 244
           MRYVAAYLLAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 245 KLS 253
           KLS
Sbjct: 61  KLS 63


>AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB,
           isoform B protein.
          Length = 113

 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 45/63 (71%), Positives = 52/63 (82%)
 Frame = +2

Query: 65  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 244
           MRYVAAYLLAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 245 KLS 253
           KLS
Sbjct: 61  KLS 63


>AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA,
           isoform A protein.
          Length = 113

 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 45/63 (71%), Positives = 52/63 (82%)
 Frame = +2

Query: 65  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 244
           MRYVAAYLLAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 245 KLS 253
           KLS
Sbjct: 61  KLS 63


>X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal
           protein protein.
          Length = 113

 Score = 92.3 bits (219), Expect = 3e-19
 Identities = 45/63 (71%), Positives = 51/63 (80%)
 Frame = +2

Query: 65  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 244
           MRYVAAYLLAVLGGK +PA  D+EKILSSVG+E D E+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 245 KLS 253
           KLS
Sbjct: 61  KLS 63


>AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p
           protein.
          Length = 113

 Score = 92.3 bits (219), Expect = 3e-19
 Identities = 45/63 (71%), Positives = 51/63 (80%)
 Frame = +2

Query: 65  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 244
           MRYVAAYLLAVLGGK +PA  D+EKILSSVG+E D E+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 245 KLS 253
           KLS
Sbjct: 61  KLS 63


>BT003783-1|AAO41464.1|  994|Drosophila melanogaster LP02833p
           protein.
          Length = 994

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 24  LSALHVSCQLGLKKCVTWPRIYWLCWVARPRQLP 125
           ++AL  +C LGL+ C+T     +  W+A+P   P
Sbjct: 783 VTALSAACSLGLESCLTEAGEQFNAWLAKPEDRP 816


>AE014297-1651|AAF54925.1|  988|Drosophila melanogaster CG8773-PA
           protein.
          Length = 988

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 24  LSALHVSCQLGLKKCVTWPRIYWLCWVARPRQLP 125
           ++AL  +C LGL+ C+T     +  W+A+P   P
Sbjct: 777 VTALSAACSLGLESCLTEAGEQFNAWLAKPEDRP 810


>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -3

Query: 214 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 104
           I  VEL D F K   V  D  G++ + N+  S RGLA
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -3

Query: 214 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 104
           I  VEL D F K   V  D  G++ + N+  S RGLA
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -3

Query: 214 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 104
           I  VEL D F K   V  D  G++ + N+  S RGLA
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -3

Query: 214 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 104
           I  VEL D F K   V  D  G++ + N+  S RGLA
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51


>AE013599-3680|AAF47056.1|  157|Drosophila melanogaster CG12491-PA
           protein.
          Length = 157

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 20/54 (37%), Positives = 27/54 (50%)
 Frame = -1

Query: 249 SFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTAS 88
           S S P++ S STS P S+  T  S S  +S  +     STS+       PST+S
Sbjct: 47  SSSTPSS-SSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPSTSS 99


>AE013599-3679|ABI31112.1|  157|Drosophila melanogaster CG34105-PA
           protein.
          Length = 157

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 20/54 (37%), Positives = 27/54 (50%)
 Frame = -1

Query: 249 SFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTAS 88
           S S P++ S STS P S+  T  S S  +S  +     STS+       PST+S
Sbjct: 47  SSSTPSS-SSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPSTSS 99


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,245,788
Number of Sequences: 53049
Number of extensions: 264473
Number of successful extensions: 1001
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)