Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30561
(782 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 37 0.003
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 36 0.009
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 35 0.015
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 33 0.046
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 33 0.061
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 31 0.14
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 31 0.19
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 31 0.25
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 31 0.25
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 30 0.43
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 27 4.0
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 26 5.3
SPAC19E9.02 |fin1||serine/threonine protein kinase Fin1|Schizosa... 26 5.3
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 25 9.3
SPAC23A1.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 25 9.3
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 25 9.3
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 37.1 bits (82), Expect = 0.003
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 371 CKKNFLNYVSLNTHMNEH--YPDFICENCGKAFASKARLRGHMRTH 502
C K F +L +HMN H Y F C C K+FA + R H + H
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLH 622
Score = 30.7 bits (66), Expect = 0.25
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +2
Query: 362 CPICKKNFLNYVSLNTHMNEH--YPDFICENCGKAFASKARLRGHMRTHEVARSPASTA 532
C ICKK+F H H F C C + FA L H ++ EV ++ TA
Sbjct: 602 CSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKS-EVGQNCLRTA 659
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 35.5 bits (78), Expect = 0.009
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +2
Query: 362 CPICKKNFLNYVSLNTHMNEHYPD--FICE--NCGKAFASKARLRGHMRTH 502
C C + F SL H H + F+C+ CGKAF ++ +R H R H
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 34.7 bits (76), Expect = 0.015
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 362 CPICKKNFLNYVSLNTHMNEHYPD---FICENCGKAFASKARLRGHMRTHEVARSP 520
CP C K F L H+ + F+C CGK F+ + LR H R H V SP
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLH-VNASP 478
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 434 FICENCGKAFASKARLRGHMRTHEVARSP 520
F+C C K F LR H+R+ + P
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEKP 451
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +3
Query: 69 TNRSFSCAVCPEKSSSLDEIKEHVTQHDRSNIHVAFKKMIFSKSQRFYKSGA 224
+ + F C +C ++ S D ++ QH+R +++ + + F + +Y SGA
Sbjct: 448 SEKPFVC-ICGKRFSRRDNLR----QHERLHVNASPRLACFFQPSGYYSSGA 494
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 33.1 bits (72), Expect = 0.046
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Frame = +2
Query: 362 CPICKKNFLNYVSLNTHMNEHYPD--FICE--NCGKAFASKARLRGHMRTHEVARSPAST 529
CP+C K F H+ H + +C C K F+ L H R H A S +
Sbjct: 28 CPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSRRNA 87
Query: 530 AA 535
AA
Sbjct: 88 AA 89
Score = 26.6 bits (56), Expect = 4.0
Identities = 22/94 (23%), Positives = 36/94 (38%)
Frame = +3
Query: 75 RSFSCAVCPEKSSSLDEIKEHVTQHDRSNIHVAFKKMIFSKSQRFYKSGARMCCKTCSAH 254
R + C +C + L+ H+ H HV ++RF +S T A
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVC---TFPGCAKRFSRSDE----LTRHAR 76
Query: 255 CPTTRNSRGTCRPAPCPNTTALATTYPSNSRKTS 356
T NSR A N +A ++ P+ + + S
Sbjct: 77 IHTNANSRRNAAAAAAANNSARSSNSPAGNLEPS 110
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 32.7 bits (71), Expect = 0.061
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +2
Query: 344 EKDQLDCPI--CKKNFLNYVSLNTHMN---EHYPDFICENCGKAFASKARLRGHM 493
E+ CP+ CKK+F +L H++ E F C++CG F K L+ H+
Sbjct: 232 ERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHL 286
Score = 32.3 bits (70), Expect = 0.081
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Frame = +2
Query: 293 CSMSKYNRSCNNLPFKLEKDQLDCPI--CKKNFLNYVSLNTHMNEHYPD--FICE--NCG 454
C ++ + + + K CP C K + L H+ H + F+C+ C
Sbjct: 2 CHFNELSIEIESKNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCS 61
Query: 455 KAFASKARLRGHMRTH 502
KAF K+ L+ H R H
Sbjct: 62 KAFYRKSHLKIHKRCH 77
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 443 ENCGKAFASKARLRGHMRTHEVAR 514
E CGK ++ + L H+RTH R
Sbjct: 28 EECGKKYSRPSLLEQHLRTHSNER 51
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 31.5 bits (68), Expect = 0.14
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 359 DCPICKKNFLNYVSLNTHMNEHYPD--FICE--NCGKAFASKARLRGHMRTH 502
+CP CK+ F H+ H + F C +C K F + L H+RTH
Sbjct: 5 ECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 31.1 bits (67), Expect = 0.19
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +2
Query: 371 CKKNFLNYVSLNTHMNEHYPD--FICENCGKAFASKARLRGHMRTHEVAR 514
C K ++ +H+ H D + C+ C F L+ H+R HE R
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGR 499
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 30.7 bits (66), Expect = 0.25
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +2
Query: 230 VLQDLLGALSDYEELSRHVQTCSMSKYNRSCNNLPFKLEKDQLDCPICKKNFLNYVSLNT 409
+L+++L A+ ++ ++ H CS ++ C L F +D+ DC + KKN++N +
Sbjct: 226 LLREVL-AMQVFKRITTH---CSSPRFVNRCIILYFSSSEDKSDC-LAKKNYVNKCLMAK 280
Query: 410 HMNEHYP--DFICENCGKAFASKARLRGHMRTH 502
+ + YP I + GK A H+ H
Sbjct: 281 ALKD-YPVHTNIDPDAGKLSFDDAFYEAHIELH 312
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 30.7 bits (66), Expect = 0.25
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 434 FICENCGKAFASKARLRGHMRTH 502
++CE C +AFA L+ H+R+H
Sbjct: 70 YVCETCTRAFARLEHLKRHIRSH 92
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 29.9 bits (64), Expect = 0.43
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +2
Query: 428 PDFICE--NCGKAFASKARLRGHMRTHE 505
P F C +C K+F K LR H RTHE
Sbjct: 24 PRFYCTYPDCPKSFTRKEHLRRHERTHE 51
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +2
Query: 365 PICKKNFLNYVSLNTH--MNEHYPDFICENCGKAFASKARLRGHMR 496
P C K+F L H +E+ F C C +AFA L H++
Sbjct: 31 PDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 26.6 bits (56), Expect = 4.0
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 508 RTFPCKYCSATFDRITKRENHVSKEH 585
+ F C +CS++F R HV+++H
Sbjct: 45 KAFICPHCSSSFTRSDVLNRHVNQKH 70
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 346 ERPAGLSDMQEELPQLRQPEHPHERALPGLYMRELRESFRVE 471
E+ +D+ ++ P L+ P+H A YM LRES+ E
Sbjct: 505 EKFFSFADVTDD-PTLKDPKHQDLVAAANAYMAMLRESYGTE 545
>SPAC19E9.02 |fin1||serine/threonine protein kinase
Fin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 26.2 bits (55), Expect = 5.3
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 544 DRITKRENHVSKEHKAGVRYGLQALQHLAGTSFLTREQKHLR*SPQRGSFKRYKV 708
+++ R + VSK KA AL LA + E+K R + G+FK K+
Sbjct: 575 EKLNIRSDEVSKPSKASKTLHGYALPSLASPYDVHAEEKIARENEMDGNFKTMKI 629
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 114 SLDEIKEHVTQHDRSN 161
+LDEI EH HD SN
Sbjct: 885 NLDEILEHAEDHDTSN 900
>SPAC23A1.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 251
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 618 ATSRWNFLSNARTKTPSLKSTTREL 692
ATSRW+ + A T + +S T EL
Sbjct: 7 ATSRWSLMLEADIATQTTRSLTNEL 31
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/42 (26%), Positives = 17/42 (40%)
Frame = +2
Query: 434 FICENCGKAFASKARLRGHMRTHEVARSPASTAARLLIGSRN 559
F C+ C F ++ L H RT+ + R + RN
Sbjct: 139 FRCDKCDMMFVKQSGLTNHKRTYHQVETVVIIGHRRYVWRRN 180
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,998,661
Number of Sequences: 5004
Number of extensions: 59622
Number of successful extensions: 264
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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