Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30561
(782 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 39 0.003
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 38 0.006
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 38 0.006
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 33 0.16
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 33 0.16
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 33 0.16
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 33 0.16
At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein ... 33 0.16
At2g17630.1 68415.m02039 phosphoserine aminotransferase, putativ... 33 0.16
At1g66140.1 68414.m07506 zinc finger (C2H2 type) family protein ... 33 0.16
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 33 0.21
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 33 0.21
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 33 0.28
At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein ... 32 0.37
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 32 0.49
At4g35630.1 68417.m05060 phosphoserine aminotransferase, chlorop... 31 0.65
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 31 0.65
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 31 0.86
At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein ... 31 0.86
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 31 0.86
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 31 1.1
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 31 1.1
At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein ... 30 1.5
At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein ... 30 1.5
At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein ... 30 1.5
At1g51700.1 68414.m05826 Dof-type zinc finger domain-containing ... 30 1.5
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 30 2.0
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 30 2.0
At2g29660.1 68415.m03605 zinc finger (C2H2 type) family protein ... 29 2.6
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 29 2.6
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 29 2.6
At1g24625.1 68414.m03099 zinc finger (C2H2 type) family protein ... 29 2.6
At5g57520.1 68418.m07187 zinc finger (C2H2 type) family protein ... 29 3.5
At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein ... 29 3.5
At4g01020.1 68417.m00137 helicase domain-containing protein / IB... 29 3.5
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 29 3.5
At3g48900.1 68416.m05342 single-strand DNA endonuclease, putativ... 29 3.5
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 29 3.5
At5g57035.1 68418.m07119 protein kinase family protein contains ... 29 4.6
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 29 4.6
At4g35610.1 68417.m05058 zinc finger (C2H2 type) family protein ... 29 4.6
At4g32840.1 68417.m04670 phosphofructokinase family protein simi... 29 4.6
At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein ... 29 4.6
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 29 4.6
At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein ... 28 6.1
At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein ... 28 6.1
At5g03700.1 68418.m00330 PAN domain-containing protein contains ... 28 6.1
At4g16610.1 68417.m02512 zinc finger (C2H2 type) family protein ... 28 6.1
At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein ... 28 6.1
At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein ... 28 6.1
At2g32490.1 68415.m03970 3'-5' exonuclease domain-containing pro... 28 6.1
At2g27630.1 68415.m03350 ubiquitin carboxyl-terminal hydrolase-r... 28 6.1
At2g20825.1 68415.m02452 expressed protein 28 6.1
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 28 6.1
At5g48890.1 68418.m06048 hypothetical protein 28 8.0
At5g10970.1 68418.m01275 zinc finger (C2H2 type) family protein ... 28 8.0
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 28 8.0
At5g05680.1 68418.m00625 nuclear pore complex protein-related co... 28 8.0
At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein ... 28 8.0
At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein ... 28 8.0
At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein ... 28 8.0
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 28 8.0
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = +2
Query: 371 CKKNFLNYVSLNTHMNEHYPD--FIC--ENCGKAFASKARLRGHMRTH 502
C K FL+ L H H + +IC E CGKAF+ LR HM+TH
Sbjct: 115 CGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTH 162
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 338 KLEKDQLDC--PICKKNFLNYVSLNTHMNEHYPDFICENCGKAFASKARLRGHMRTHEVA 511
KL+ + C P C K F N L +H+ + CE CG K ++ H+RTH+
Sbjct: 241 KLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHINCEICGSKHLKK-NIKRHLRTHDED 299
Query: 512 RSP 520
SP
Sbjct: 300 SSP 302
Score = 31.5 bits (68), Expect = 0.65
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 440 CENCGKAFASKARLRGHMRTHEVARS 517
C+ CG F A L+ HM++H + RS
Sbjct: 68 CQECGAEFKKPAHLKQHMQSHSLERS 93
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +2
Query: 362 CPICKKNFLNYVSLNTHMNEHYPD--FIC--ENCGKAFASKARLRGHMRTHE 505
C C F L HM H + F C ++C ++ K L H+ TH+
Sbjct: 68 CQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHK 119
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 338 KLEKDQLDC--PICKKNFLNYVSLNTHMNEHYPDFICENCGKAFASKARLRGHMRTHEVA 511
KL+ + C P C K F N L +H+ + CE CG K ++ H+RTH+
Sbjct: 153 KLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHINCEICGSKHLKK-NIKRHLRTHDED 211
Query: 512 RSP 520
SP
Sbjct: 212 SSP 214
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 17/70 (24%)
Frame = +2
Query: 344 EKDQLDCPICKKNFLNYVSLNTHMNEH-----------------YPDFICENCGKAFASK 472
EK C +C K F +Y +L H H +C CGK+FA+
Sbjct: 71 EKPSYKCGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGKSFATG 130
Query: 473 ARLRGHMRTH 502
L GH R H
Sbjct: 131 QALGGHKRCH 140
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 347 KDQLDCPICKKNFLNYVSLNTHMNEHY--PDFICENCGKAFASKARLRGHMRTHE 505
++ +D P K ++ +L TH + F+C CGKAFA +RG RTHE
Sbjct: 271 RNNIDHPRAKP-LKDFRTLQTHYKRKHGIKPFMCRKCGKAFA----VRGDWRTHE 320
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Frame = +2
Query: 293 CSMSKYNRSCNNLP----FKLEKDQLDCPICKKNFLNYVSLNTHMNEH 424
C +S+ N+ +P + Q CP+C K F Y ++ HM H
Sbjct: 192 CRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGH 239
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 413 MNEHYPDFICENCGKAFASKARLRGHMRTHEVARSPAS 526
+++H D+ C CGK+F S L GH +H R P S
Sbjct: 87 LSDHQKDYKCSVCGKSFPSYQALGGHKTSH---RKPVS 121
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 368 ICKKNFLNYVSLNTHMNEHYPD-FICENCGKAFASKARLRGHMRTHE 505
+ + + + + LN H H + F C+ C K F+S L GH +H+
Sbjct: 24 LAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQALGGHRASHK 70
>At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +2
Query: 440 CENCGKAFASKARLRGHMRTHEVARSPASTAARLLIGSRNA 562
C CG F S L GHMR H A + S A SRN+
Sbjct: 190 CSICGSEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRNS 230
>At2g17630.1 68415.m02039 phosphoserine aminotransferase, putative
similar to Phosphoserine aminotransferase, chloroplast
precursor (PSAT) (SP:Q96255) [Arabidopsis thaliana];
contains TIGRFAM TIGR01364: phosphoserine
aminotransferase; contains Pfam PF00266:
aminotransferase, class V
Length = 422
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +2
Query: 182 DDLLEVAAVLQVRRAHVLQDLLGALSDYEELSRHVQTCSMSKYNRSCNNLPFKLEKDQLD 361
DDLLE + +V + + Q L + + SR C + K RS N+PF LEK +L+
Sbjct: 313 DDLLEQGGLKEVEKKN--QRKAELLYNAIDESRGFFRCPVEKSVRSLMNVPFTLEKSELE 370
Query: 362 CPICKK 379
K+
Sbjct: 371 AEFIKE 376
>At1g66140.1 68414.m07506 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 260
Score = 33.5 bits (73), Expect = 0.16
Identities = 31/119 (26%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
Frame = +2
Query: 191 LEVAAVLQVRRAHVLQDLLGALSDYEELSRHVQTCSMSKYNRSCNNLPFKLEKDQLDCPI 370
LE+ A + V +L DY+ +S ++ S+S N + NNL LE L P+
Sbjct: 7 LEIEASSGSSSSQVASNLSPVGEDYKPISLNL---SLSFNNNNNNNLD--LESSSLTLPL 61
Query: 371 CKKNFLNYVSLNTHMNEHYPD--FICENCGKAFASKARLRGHMRTHEVARSPASTAARL 541
+ + F C C + F S L GH H+ R+ A A R+
Sbjct: 62 SSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRM 120
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 404 NTHMNE-HYPDFICENCGKAFASKARLRGHMRTHEVARSPASTAA 535
NT ++ H D +C C K+F++ L GH R H A P ST A
Sbjct: 400 NTSLSSSHNGDHVCNICHKSFSTGQALGGHKRCHWTA--PVSTVA 442
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 437 ICENCGKAFASKARLRGHMRTH 502
IC CGK F S L GH R H
Sbjct: 80 ICCECGKRFVSGKALGGHKRIH 101
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 440 CENCGKAFASKARLRGHMRTHEVARSPASTAARLLIGSRNARITYPRSIRPASATACKRC 619
C+ CGK+F L GH R H + S + R +++ RP S+++C C
Sbjct: 45 CKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKL----QKRPESSSSCYEC 100
Query: 620 NI 625
+
Sbjct: 101 KV 102
Score = 26.2 bits (55), Expect(2) = 0.30
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = +2
Query: 440 CENCGKAFASKARLRGHMRTH-EVARSPASTA-ARLLIGSRNAR--ITYPRSIRPASATA 607
C+ CGK F L GH + H R AST L+ S A+ ++ P S + +
Sbjct: 100 CKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPSSFKVSQEEK 159
Query: 608 CKRC 619
C
Sbjct: 160 FLHC 163
Score = 25.0 bits (52), Expect(2) = 0.30
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 347 KDQLDCPICKKNFLNYVSLNTHMNEHYP 430
K C IC K+F Y +L H H P
Sbjct: 40 KSSHKCKICGKSFECYQALGGHQRIHRP 67
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 437 ICENCGKAFASKARLRGHMRTHEVARSPASTAA 535
IC+ C K+F++ L GHMR H + P S+++
Sbjct: 10 ICQVCKKSFSNGKALGGHMRAHTLKFFPGSSSS 42
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 335 FKLEKDQLDCPICKKNFLNYVSLNTHMNEH 424
+ L K C +CKK+F N +L HM H
Sbjct: 2 YSLLKKTKICQVCKKSFSNGKALGGHMRAH 31
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 434 FICENCGKAFASKARLRGHMRTHEVAR 514
+ C+ CGK S L GH +H+ R
Sbjct: 228 YTCDTCGKVLRSYQALGGHRTSHKYKR 254
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 440 CENCGKAFASKARLRGHMRTHEVARSPA 523
C+ C + FAS L GH + H + +PA
Sbjct: 276 CQICNRMFASGQALGGHKKIHYMFLAPA 303
>At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 211
Score = 32.3 bits (70), Expect = 0.37
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 440 CENCGKAFASKARLRGHMRTHEVARSPASTAARLLIGSRNARITY 574
C+ CGK FA+ L GH H+ R RL + +R A I Y
Sbjct: 62 CQYCGKEFANSQALGGHQNAHKKERLKKK---RLQLQARRASIGY 103
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 31.9 bits (69), Expect = 0.49
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 347 KDQLDCPICKKNFLNYVSLNTHMNEHYPD--FICENCGKAFASKARLRGHMRTHE 505
K+ +D P K ++ +L TH + F C CGKAFA ++G RTHE
Sbjct: 232 KNNIDHPRAKP-LKDFRTLQTHYKRKHGSKPFACRMCGKAFA----VKGDWRTHE 281
>At4g35630.1 68417.m05060 phosphoserine aminotransferase,
chloroplast (PSAT) identical to Phosphoserine
aminotransferase, chloroplast precursor (PSAT)
(SP:Q96255)[Arabidopsis thaliana]; contains TIGRFAM
TIGR01364: phosphoserine aminotransferase; contains Pfam
PF00266: aminotransferase, class V
Length = 430
Score = 31.5 bits (68), Expect = 0.65
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +2
Query: 182 DDLLEVAAVLQVRRAHVLQDLLGALSDYEELSRHVQTCSMSKYNRSCNNLPFKLEKDQLD 361
+DLLE + +V + + Q L + E S C + K RS N+PF LEK +L+
Sbjct: 321 EDLLEQGGLKEVEKKN--QRKADLLYNAIEESNGFFRCPVEKSVRSLMNVPFTLEKSELE 378
Query: 362 CPICKK 379
K+
Sbjct: 379 AEFIKE 384
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 31.5 bits (68), Expect = 0.65
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +2
Query: 374 KKNFLNYVSLNTHMNEHYPDFICENCGKAFASKARLRGHMRTH 502
KK ++ + ++ C CG+ F S LRGHM H
Sbjct: 44 KKRLVDQRKMMAQKHKQQQQVGCRECGRVFVSLKALRGHMACH 86
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Frame = +2
Query: 434 FICENCGKAFASKARLRGHMRTHEVARSPA--STAARLLIGSRNARITYPRSIRPASATA 607
F+C+ C K F S L GH+R H S + L+ R + +
Sbjct: 9 FLCKYCYKTFPSGKALGGHIRIHTNENSVGYNGNKKKRLVDQRKMMAQKHKQQQQVGCRE 68
Query: 608 CKRCNISLE 634
C R +SL+
Sbjct: 69 CGRVFVSLK 77
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 31.1 bits (67), Expect = 0.86
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 440 CENCGKAFASKARLRGHMRTH 502
C+ CGK F A LR HMR H
Sbjct: 219 CQICGKGFKRDANLRMHMRAH 239
>At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 275
Score = 31.1 bits (67), Expect = 0.86
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 407 THMNEHYPDFICENCGKAFASKARLRGHMRTHE 505
TH+ + P +C CGK FAS + GH+R H+
Sbjct: 135 THLPQGPP--MCNVCGKGFASWKAVFGHLRQHK 165
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 31.1 bits (67), Expect = 0.86
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 347 KDQLDCPICKKNFLNYVSLNTHMNEHYP--DFICENCGKAFASKARLRGHMRTHE 505
K+ +D P + ++ +L TH + F C CGKAFA ++G RTHE
Sbjct: 310 KNNIDHPRARP-LKDFRTLQTHYKRKHGVRPFACRRCGKAFA----VKGDWRTHE 359
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 431 DFICENCGKAFASKARLRGHMRTHEVARSPASTA 532
D+ C CGK+F+S L GH +H R P +T+
Sbjct: 96 DYKCTVCGKSFSSYQALGGHKTSH---RKPTNTS 126
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 434 FICENCGKAFASKARLRGHMRTHE 505
F CE CGK F S L GH +H+
Sbjct: 194 FKCETCGKVFKSYQALGGHRASHK 217
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 350 DQLDCPICKKNFLNYVSLNTHMNEHYPDFICENC 451
++ C C K+F+N +L HM H E C
Sbjct: 2 ERYKCRFCFKSFINGRALGGHMRSHMLTLSAERC 35
>At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 137
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 305 KYNRSCNNLPFKLEKDQLDCPICKKNFLNYVSLNTHMNEHYPD 433
++ R+ ++ + + +C CK+ F N +L HMN H D
Sbjct: 18 RHRRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRRD 60
>At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 398
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = +2
Query: 440 CENCGKAFASKARLRGHMRTHE---VARSPASTA 532
C CG F S L GHMR H VA + ASTA
Sbjct: 263 CGICGAEFTSGQALGGHMRRHRGAVVAAAAASTA 296
>At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 270
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 440 CENCGKAFASKARLRGHMRTH 502
C CGK F S L GHMR H
Sbjct: 67 CTECGKQFGSLKALFGHMRCH 87
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 407 THMNEHYPDFICENCGKAFASKARLRGHMRTHE 505
T +E F C+ C K F S L GH TH+
Sbjct: 139 TRSSEVEERFECDGCKKVFGSHQALGGHRATHK 171
>At1g51700.1 68414.m05826 Dof-type zinc finger domain-containing
protein (ADOF1) identical to cDNA adof1 mRNA for dof
zinc finger protein, GI:3608260; contains Pfam profile
PF02701: Dof domain, zinc finger
Length = 194
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 326 NLPFKLEKDQLDCPICKKNFLNYVSLNTHMNEHYPDFICENCGKAFASKARLR 484
N P E++QL CP C + N + N P C+NC + + LR
Sbjct: 23 NQPELPEQEQLKCPRCDSPNTKFCYYNNY-NLSQPRHFCKNCRRYWTKGGALR 74
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 440 CENCGKAFASKARLRGHMRTHEVAR 514
CE CGK F S L GH +H+ R
Sbjct: 175 CETCGKVFKSYQALGGHRASHKKNR 199
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 434 FICENCGKAFASKARLRGHMRTH 502
F+C+ C K F L GH+RTH
Sbjct: 9 FVCKFCSKRFPCGKSLGGHIRTH 31
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 440 CENCGKAFASKARLRGHMRTH 502
C CGK F S L GHM H
Sbjct: 95 CRECGKGFVSSKALCGHMACH 115
>At2g29660.1 68415.m03605 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 373
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 514 FPCKYCSATFDRITKRENHVSKEH 585
FPC C F +I ENH++ +H
Sbjct: 126 FPCNSCGEIFPKINLLENHIAIKH 149
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 440 CENCGKAFASKARLRGHMRTHEVARSPASTAAR 538
C CGK F A LR HMR H A+ A+
Sbjct: 246 CTICGKGFKRDANLRMHMRGHGDEYKTAAALAK 278
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 440 CENCGKAFASKARLRGHMRTHEVARSPASTAAR 538
C CGK F A LR HMR H A+ A+
Sbjct: 246 CTICGKGFKRDANLRMHMRGHGDEYKTAAALAK 278
>At1g24625.1 68414.m03099 zinc finger (C2H2 type) family protein
(ZFP7) identical to zinc finger protein, ZFP7
gi|790685|gb|AAA87303; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 209
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 434 FICENCGKAFASKARLRGHMRTHEVARSPASTAARL--LIGSRNARITYPRS 583
F C C + F S L GH H+ R+ A A + + G + TY S
Sbjct: 59 FSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSS 110
>At5g57520.1 68418.m07187 zinc finger (C2H2 type) family protein
(ZFP2) identical to zinc finger protein 2 (ZFP2)
GI:790674 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 150
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +2
Query: 434 FICENCGKAFASKARLRGHMRTHEVARSPASTAARLLIGSRNARITYP 577
F C C + F S L GH H++ R+ A + L S P
Sbjct: 52 FSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELFRSSNTVDSDQP 99
>At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 586
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 440 CENCGKAFASKARLRGHMRTHEVARSP 520
CE C + F S R H R H R P
Sbjct: 63 CEKCSREFCSPVNFRRHNRMHRRQRKP 89
>At4g01020.1 68417.m00137 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1787
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +2
Query: 347 KDQLDCPICKKNFLNYVSLNTHMNEHYPDFICENCGKAFASKARLRGHMRT 499
KD +CPICK N H+ IC C F H+RT
Sbjct: 1714 KDVKECPICKSTIEKTDGCN-HLQCRCGKHICWTCLDVFTQAEPCYAHLRT 1763
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 434 FICENCGKAFASKARLRGHMRTHEVARS 517
+ICE C + F++ L GHM H R+
Sbjct: 21 YICEFCERGFSNAQALGGHMNIHRKDRA 48
>At3g48900.1 68416.m05342 single-strand DNA endonuclease, putative
similar to single-strand DNA endonuclease-1 [Oryza
sativa (japonica cultivar-group)]
gi|16923283|dbj|BAB72003
Length = 337
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 215 VRRAHVLQDLLGALSDYEELSRHVQTCSMSKYNRSCNNLPFKLEKDQLDC 364
++ A V+ LG L + + C++ C N+P+ +E+D L C
Sbjct: 122 IKEAKVIASTLGILC-LDGIEEAEAQCALLNSESLCRNMPWSVERDSLVC 170
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 440 CENCGKAFASKARLRGHMRTH 502
C+ C K+FA+ L GHMR+H
Sbjct: 7 CKLCWKSFANGRALGGHMRSH 27
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 440 CENCGKAFASKARLRGHMRTHEVARSPASTAARLLIGSRNARITYP 577
C C K F S L GH R+H A + + + ++I + + P
Sbjct: 211 CPICAKVFTSGQALGGHKRSHASANNEFTRRSGIIISLIDLNLPAP 256
>At5g57035.1 68418.m07119 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 786
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +2
Query: 158 KHPRRLQEDDLLEVAAVLQVRRAHVLQDLLGALSDYEELSRHVQTCSMSKYNRSCNNLPF 337
+H R + + + + R H+ G ++ E+L + VQT ++S Y ++C L
Sbjct: 260 EHCRSILRHSTVSTSKIQMDPRPHLKTPKSGVRAEVEQLRKEVQT-TLSMYKQACEELVH 318
Query: 338 K 340
K
Sbjct: 319 K 319
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 434 FICENCGKAFASKARLRGHMRTHEV 508
F+CE CGK F L+ H R H +
Sbjct: 66 FLCEVCGKGFQRDQNLQLHRRGHNL 90
>At4g35610.1 68417.m05058 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 271
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 437 ICENCGKAFASKARLRGHMRTH 502
+C CG+ F S + GHMR H
Sbjct: 139 VCHICGRGFGSWKAVFGHMRAH 160
>At4g32840.1 68417.m04670 phosphofructokinase family protein similar
to phosphofructokinase [Amycolatopsis methanolica]
GI:17432243; contains Pfam profile PF00365:
Phosphofructokinase
Length = 462
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/79 (24%), Positives = 33/79 (41%)
Frame = +3
Query: 24 TDLMLQSGLFPFKIKTNRSFSCAVCPEKSSSLDEIKEHVTQHDRSNIHVAFKKMIFSKSQ 203
+D +L +P +++N ++S V D ++E + H S F++ +
Sbjct: 28 SDYILDLPTYPNPLQSNAAYS-VVRQYFVDEDDTVQEKIVVHKDSPRGTHFRRAGPRQKV 86
Query: 204 RFYKSGARMCCKTCSAHCP 260
F S R C TC CP
Sbjct: 87 YFKPSDVRACIVTCGGLCP 105
>At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein
contains Prosite PS00028: Zinc finger, C2H2 type, domain
Length = 745
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 362 CPICKKNFLNYVSLNTHMN-EHYPDFICE 445
C CK+ F L THM+ EHY IC+
Sbjct: 200 CEFCKRPFYGDNELYTHMSREHYTCHICQ 228
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 434 FICENCGKAFASKARLRGHMRTHEV 508
F+CE CGK F L+ H R H +
Sbjct: 70 FLCEICGKGFQRDQNLQLHRRGHNL 94
>At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein
(ZFP3) identical to zinc finger protein, ZFP3
gi|790677|gb|AAA87299; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 235
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = +2
Query: 344 EKDQLDCPICKKNFLNYVSLNTHMNEHYPDFICENCGKAFASKARLRGH 490
E+ C C++ F + +L H N H + G+ A+ A GH
Sbjct: 57 EQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGH 105
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 434 FICENCGKAFASKARLRGHMRTHEVARSPASTAARL 541
F C C + F S L GH H+ R+ A R+
Sbjct: 61 FSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRM 96
>At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 191
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +2
Query: 254 LSDYEELSRHVQTCSMSKYNRSCNNLPFKLEKDQLDCPICKKNFLNYVSLNTHMNEH 424
L +E + H ++ S YN + ++ ++ + C C +NF +L H N H
Sbjct: 21 LFGFEFGASHEESESKDNYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNAH 77
>At5g03700.1 68418.m00330 PAN domain-containing protein contains
Pfam profile: PF00024 PAN domain
Length = 482
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/84 (23%), Positives = 29/84 (34%), Gaps = 3/84 (3%)
Frame = +3
Query: 96 CPEKSSSLDEIKEHVTQHD---RSNIHVAFKKMIFSKSQRFYKSGARMCCKTCSAHCPTT 266
C +SS + + T+ R + V FK+++ K+ MC C
Sbjct: 319 CTHAASSPADFCDKTTEFKVVRRDGVEVPFKELMDHKTTSSLGECEEMCVDNCKCFGAVY 378
Query: 267 RNSRGTCRPAPCPNTTALATTYPS 338
N G C P T L PS
Sbjct: 379 NNGSGFCYLVNYPIRTMLGVADPS 402
>At4g16610.1 68417.m02512 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 440 CENCGKAFASKARLRGHMRTHEVARSPASTAARL 541
C+ C K+F + L GHM++H V+ S +S +L
Sbjct: 7 CKLCSKSFCNGRALGGHMKSHLVS-SQSSARKKL 39
>At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 230
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +2
Query: 233 LQDLLGALSDYEELSRHVQTCSMSKYNRSCNN---LPFKLE-KDQLDCPICKKNFLNYVS 400
L+D + ++ D+ E+ V M K + +C++ L KL+ K C IC K+F Y +
Sbjct: 50 LKDCVESMLDFREM---VSNSGMEK-STTCSDVVALRSKLQSKSSHRCQICGKSFECYQA 105
Query: 401 LNTHMNEHYP 430
L H H P
Sbjct: 106 LGGHRRLHRP 115
>At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 172
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 359 DCPICKKNFLNYVSLNTHMNEH 424
DC ICK+ F N +L H N H
Sbjct: 22 DCDICKRGFTNPQALGGHNNIH 43
>At2g32490.1 68415.m03970 3'-5' exonuclease domain-containing
protein contains Pfam profile PF01612: 3'-5' exonuclease
Length = 217
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 368 ICKKNFLNYVSLNTHMNEHYPDFICE 445
+C F Y SL+ H +EH+ DF E
Sbjct: 8 LCFNGFTGYSSLHHHYHEHHVDFFGE 33
>At2g27630.1 68415.m03350 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF04780:
Protein of unknown function (DUF629), PF04781: Protein
of unknown function (DUF627)
Length = 1122
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 374 KKNFLNYVSLNTHMNEHYPDFICENCGKAFASKARLRGHM-RTHEVARSPASTAARLLIG 550
++N L + ++ + + ++C+NC + F+S + H+ + H P+ IG
Sbjct: 231 RQNALEQILVSAREDRKWTFWMCQNCSEKFSSAEECKKHLEQEHAAGFKPSKEMDMKRIG 290
Query: 551 SRNAR 565
AR
Sbjct: 291 KDWAR 295
>At2g20825.1 68415.m02452 expressed protein
Length = 228
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Frame = +2
Query: 323 NNLPFKLEKDQLDCPICKKNFLNYVSL---NTHMNE--HYPDFI-CENCGKAFASKARLR 484
NN+ +E D++ P+ K L Y + N+++++ H +F+ C CGK + R R
Sbjct: 89 NNVWVFIEGDKV--PLSKTVLLRYYNKALKNSNVSKVIHRDEFVGCSTCGKERRFRLRSR 146
Query: 485 GHMRTHEVA 511
G R H A
Sbjct: 147 GECRMHHDA 155
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +2
Query: 488 HMRTHEVARSPASTAARLLIGSRNARITYPRSIRPASATACKRCNISLELPF*RENKNTF 667
++ TH P+S+++ LL +T R RPA + +SL E+
Sbjct: 12 NINTHHHNPPPSSSSSDLLPDGNGTAVTQKRKRRPAGTPDPEAEVVSLSPRTLLESDRYV 71
Query: 668 AEVHNEGALRD 700
E+ N+G RD
Sbjct: 72 CEICNQGFQRD 82
Score = 27.9 bits (59), Expect = 8.0
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +2
Query: 416 NEHYPDFICENCGKAFASKARLRGHMRT 499
+ ++ +ICE C K +A ++ + H++T
Sbjct: 142 HSNHKQWICERCSKGYAVQSDYKAHLKT 169
>At5g48890.1 68418.m06048 hypothetical protein
Length = 173
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 434 FICENCGKAFASKARLRGHMRTHEVARSPASTAAR 538
F C C + F S L GH H+ R+ A A R
Sbjct: 35 FPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKR 69
>At5g10970.1 68418.m01275 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type domain, Prosite:PS00028
Length = 272
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 434 FICENCGKAFASKARLRGHMRTHEVARSPASTAARL 541
F C C + F S L GH H+ R+ A R+
Sbjct: 104 FSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRM 139
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 434 FICENCGKAFASKARLRGHMRTHEVARS 517
+ C CG+ F S L GHM H R+
Sbjct: 55 YSCSFCGREFKSAQALGGHMNVHRRDRA 82
>At5g05680.1 68418.m00625 nuclear pore complex protein-related
contains weak similarity to Nuclear pore complex protein
Nup88 (Nucleoporin Nup88) (88 kDa nuclear pore complex
protein) (Swiss-Prot:Q99567) [Homo sapiens]
Length = 810
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 38 PERVVSVQDQNKQELQLRRLP*EIQQSGRDKGARHPA 148
PER+ S+ D L LP Q SG+D+ + P+
Sbjct: 471 PERIYSLHDGGIDSTVLHSLPFTSQASGKDEALKTPS 507
>At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 238
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 428 PDFICENCGKAFASKARLRGHMRTHEVARSPASTA 532
P + C C KAF+S L GH +H + S +A
Sbjct: 87 PIYKCSVCDKAFSSYQALGGHKASHRKSFSLTQSA 121
>At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 215
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 434 FICENCGKAFASKARLRGHMRTHEVARSPA 523
F C C K F++ L GH H+ RS A
Sbjct: 67 FACTFCKKEFSTSQALGGHQNAHKQERSLA 96
>At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 170
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +3
Query: 6 TEDLADTDLMLQSGLFPFKIKTNRSFSCAVCPEKSSSLDEIKEHVTQHDR 155
T D A + LML SG+ + R F C C S + H H +
Sbjct: 11 TVDTAASCLMLLSGIGEHDGRKKRVFRCKTCERDFDSFQALGGHRASHSK 60
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 434 FICENCGKAFASKARLRGHMRTHEV 508
FICE C K F + L+ H R H +
Sbjct: 81 FICEVCNKGFQREQNLQLHRRGHNL 105
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,179,725
Number of Sequences: 28952
Number of extensions: 328538
Number of successful extensions: 1386
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1382
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1755792000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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