Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30560
         (710 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VNM9 Cluster: CG15592-PA; n=3; Sophophora|Rep: CG1559...    42   0.011
UniRef50_Q7QB90 Cluster: ENSANGP00000020356; n=4; Endopterygota|...    42   0.015
UniRef50_UPI0000D571AA Cluster: PREDICTED: similar to CG15593-PB...    35   1.7  
UniRef50_Q856Y4 Cluster: Gp50; n=6; Viruses|Rep: Gp50 - Mycobact...    33   6.9  
UniRef50_Q2H2E0 Cluster: Putative uncharacterized protein; n=1; ...    33   6.9  

>UniRef50_Q9VNM9 Cluster: CG15592-PA; n=3; Sophophora|Rep:
           CG15592-PA - Drosophila melanogaster (Fruit fly)
          Length = 233

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 19/47 (40%), Positives = 32/47 (68%)
 Frame = +3

Query: 264 LPADPEARDAEVNYRLLDGVVNLFETHSIEVKMNPAEKEELQRSLEE 404
           LP + EAR+AEV+  L++ V   F TH+++ K+     +++QR+LEE
Sbjct: 84  LPEEVEAREAEVDSLLVERVARFFGTHTLQFKVPKDSIQDMQRALEE 130



 Score = 37.9 bits (84), Expect = 0.24
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +1

Query: 49  YILIALFALACAERDSTLETAISFVQDCNE-DYFLCVKEKLLRIVENARTSRSVNLVDGV 225
           + LIA  A A +E DS L +A+  V+DC E    LC+KE+ L   +    +  V L +G+
Sbjct: 8   FALIASTAAATSEADSLLTSALKMVKDCGERSMVLCMKERALHYFD--AENGDVRLTEGI 65


>UniRef50_Q7QB90 Cluster: ENSANGP00000020356; n=4;
           Endopterygota|Rep: ENSANGP00000020356 - Anopheles
           gambiae str. PEST
          Length = 238

 Score = 41.9 bits (94), Expect = 0.015
 Identities = 17/47 (36%), Positives = 32/47 (68%)
 Frame = +3

Query: 264 LPADPEARDAEVNYRLLDGVVNLFETHSIEVKMNPAEKEELQRSLEE 404
           LPA+PEAR++E++  L++       TH+++ ++     E++QRSL+E
Sbjct: 86  LPAEPEARESEIDGLLVERAARFLGTHTLQFQVPKESIEDMQRSLDE 132


>UniRef50_UPI0000D571AA Cluster: PREDICTED: similar to CG15593-PB,
           isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG15593-PB, isoform B - Tribolium castaneum
          Length = 767

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +1

Query: 46  FYILIALFALACAERDSTLETAISFVQDC-NEDYFLCVKEKLLRIVENARTSRSVNLVDG 222
           F+ L  +FA +  E D+    AI FV +C +    LC KEK L+ +E  R   ++++ +G
Sbjct: 10  FWFLTDVFADSLYE-DNVYREAIVFVNECGSRSLTLCFKEKALKFIE--RLPNNIDIGNG 66

Query: 223 VFIK 234
           + IK
Sbjct: 67  IRIK 70


>UniRef50_Q856Y4 Cluster: Gp50; n=6; Viruses|Rep: Gp50 -
           Mycobacterium phage Rosebush
          Length = 571

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -3

Query: 348 WSEFRRG*PLRPGVCS*PLRLWPQ-GRRGEAP*WLPGFTLDKDTIDKIDAPR 196
           W E   G P   G     + LWP+ GR+G    WLPG T  K  +D +   R
Sbjct: 436 WLETPAGVPFINGSDGWLVFLWPETGRKGRDQRWLPGLTSTKRRMDALPLER 487


>UniRef50_Q2H2E0 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 547

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 710 KFRTRNPREPARGPASWANMLPHEGDGSRDARRGVQPRTLSWYDLVSST 564
           + + + P EPA  PASW + L H+   + +A    +PR L  +  V+ T
Sbjct: 142 RMQEQKPAEPAPVPASWLSRLQHQLSQTIEAMAAARPRGLRKFFHVAET 190


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,823,744
Number of Sequences: 1657284
Number of extensions: 12478505
Number of successful extensions: 32360
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32357
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)