Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30560
         (710 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.4  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   5.4  
AF515525-1|AAM61892.1|  235|Anopheles gambiae glutathione S-tran...    23   7.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   9.5  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   9.5  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -3

Query: 429  RLPSSYHDLLQVTSEVLPSQQDSF*PRWSEFRR 331
            +LP +YH+     S  +P    +F P  +E +R
Sbjct: 1844 QLPPAYHEQADTFSRTIPFFGGNFSPEHTELQR 1876


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -3

Query: 429  RLPSSYHDLLQVTSEVLPSQQDSF*PRWSEFRR 331
            +LP +YH+     S  +P    +F P  +E +R
Sbjct: 1845 QLPPAYHEQADTFSRTIPFFGGNFSPEHTELQR 1877


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 153 CQGETPSYCGKC*NVEERQSC 215
           C G     CG C NV++ + C
Sbjct: 530 CYGPNEDNCGSCMNVKDGRFC 550


>AF515525-1|AAM61892.1|  235|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 235

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 264 LPADPEARDAEVNYRLLDGVVNLFE 338
           L  +P+A   E   R LDGV+N F+
Sbjct: 126 LGKEPDAGKTERLRRRLDGVLNFFD 150


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 269 GERLRDGFPGSPLIKTPS 216
           GE  RDG PG P I  P+
Sbjct: 383 GEPGRDGIPGQPGIAGPA 400


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +3

Query: 201 ERQSCRWC 224
           +R+SCRWC
Sbjct: 362 DRESCRWC 369


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,340
Number of Sequences: 2352
Number of extensions: 12973
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)