Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30560
         (710 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070617-1|AAL48088.1|  233|Drosophila melanogaster RE71995p pro...    42   6e-04
AE014297-421|AAF51900.1|  233|Drosophila melanogaster CG15592-PA...    42   6e-04
BT009951-1|AAQ22420.1|  295|Drosophila melanogaster RH51767p pro...    31   1.2  
AE014297-425|AAF51897.2|  295|Drosophila melanogaster CG1154-PA ...    31   1.2  
DQ494533-1|ABF29833.1| 2445|Drosophila melanogaster leucine-rich...    30   3.6  
AE014297-2835|AAF55793.2| 2351|Drosophila melanogaster CG5483-PA...    30   3.6  
AE014296-1382|AAF50478.1|  283|Drosophila melanogaster CG13675-P...    29   8.2  

>AY070617-1|AAL48088.1|  233|Drosophila melanogaster RE71995p
           protein.
          Length = 233

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 19/47 (40%), Positives = 32/47 (68%)
 Frame = +3

Query: 264 LPADPEARDAEVNYRLLDGVVNLFETHSIEVKMNPAEKEELQRSLEE 404
           LP + EAR+AEV+  L++ V   F TH+++ K+     +++QR+LEE
Sbjct: 84  LPEEVEAREAEVDSLLVERVARFFGTHTLQFKVPKDSIQDMQRALEE 130



 Score = 37.9 bits (84), Expect = 0.013
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +1

Query: 49  YILIALFALACAERDSTLETAISFVQDCNE-DYFLCVKEKLLRIVENARTSRSVNLVDGV 225
           + LIA  A A +E DS L +A+  V+DC E    LC+KE+ L   +    +  V L +G+
Sbjct: 8   FALIASTAAATSEADSLLTSALKMVKDCGERSMVLCMKERALHYFD--AENGDVRLTEGI 65


>AE014297-421|AAF51900.1|  233|Drosophila melanogaster CG15592-PA
           protein.
          Length = 233

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 19/47 (40%), Positives = 32/47 (68%)
 Frame = +3

Query: 264 LPADPEARDAEVNYRLLDGVVNLFETHSIEVKMNPAEKEELQRSLEE 404
           LP + EAR+AEV+  L++ V   F TH+++ K+     +++QR+LEE
Sbjct: 84  LPEEVEAREAEVDSLLVERVARFFGTHTLQFKVPKDSIQDMQRALEE 130



 Score = 37.9 bits (84), Expect = 0.013
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +1

Query: 49  YILIALFALACAERDSTLETAISFVQDCNE-DYFLCVKEKLLRIVENARTSRSVNLVDGV 225
           + LIA  A A +E DS L +A+  V+DC E    LC+KE+ L   +    +  V L +G+
Sbjct: 8   FALIASTAAATSEADSLLTSALKMVKDCGERSMVLCMKERALHYFD--AENGDVRLTEGI 65


>BT009951-1|AAQ22420.1|  295|Drosophila melanogaster RH51767p
           protein.
          Length = 295

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 264 LPADPEARDAEVNYRLLDGVVNLFETHSIEVKMNPAEKEELQRSLEE 404
           LP     RDA++   L++ +   F  HS++V       +E+ R LEE
Sbjct: 112 LPRSGSDRDAKLTNMLIERLSYFFNGHSLQVSFPKLTSDEIGRGLEE 158


>AE014297-425|AAF51897.2|  295|Drosophila melanogaster CG1154-PA
           protein.
          Length = 295

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 264 LPADPEARDAEVNYRLLDGVVNLFETHSIEVKMNPAEKEELQRSLEE 404
           LP     RDA++   L++ +   F  HS++V       +E+ R LEE
Sbjct: 112 LPRSGSDRDAKLTNMLIERLSYFFNGHSLQVSFPKLTSDEIGRGLEE 158


>DQ494533-1|ABF29833.1| 2445|Drosophila melanogaster leucine-rich
            repeat kinase protein.
          Length = 2445

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -1

Query: 206  TLLDVLAFSTIRRSFSLTHKK*SSLQSWTKLMAVSKVLSRS-AHAKANSA 60
            TLLD+L       S S +H+  +S   W K M  ++  SRS  H+ A+SA
Sbjct: 940  TLLDLLRQGAGSGSSSSSHRSRASENHWAKRMGHARSTSRSHRHSSASSA 989


>AE014297-2835|AAF55793.2| 2351|Drosophila melanogaster CG5483-PA
            protein.
          Length = 2351

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -1

Query: 206  TLLDVLAFSTIRRSFSLTHKK*SSLQSWTKLMAVSKVLSRS-AHAKANSA 60
            TLLD+L       S S +H+  +S   W K M  ++  SRS  H+ A+SA
Sbjct: 940  TLLDLLRQGAGSGSSSSSHRSRASENHWAKRMGHARSTSRSHRHSSASSA 989


>AE014296-1382|AAF50478.1|  283|Drosophila melanogaster CG13675-PA
           protein.
          Length = 283

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +3

Query: 138 GLLFMCQGETPSYCGKC*NVEER-QSCRWCLYQG 236
           GL F CQG  P Y     + E R Q   WCL+ G
Sbjct: 24  GLAFNCQGRQPGYYA---DTETRCQVWHWCLHSG 54


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,752,064
Number of Sequences: 53049
Number of extensions: 566681
Number of successful extensions: 2246
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2246
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)