Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30559
         (704 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    26   1.3  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   7.1  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   7.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.4  
AJ302661-1|CAC35526.1|  128|Anopheles gambiae gSG8 protein protein.    23   9.4  

>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 175 DEYEQLSSEALEAGRICCNKYLVKNCGRISSISA*DFTLST 297
           D Y       LE  RI  +   V+ CGR S  +  DF  +T
Sbjct: 590 DRYRSEFGFVLEGRRILVDDIRVRGCGRASLFTEPDFAEAT 630


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +1

Query: 175 DEYEQLSSEALEAGRICCNKYLVKNCGRISSISA*DFTLST 297
           D Y       LE  RI  +   V+ CGR S  +  D   +T
Sbjct: 634 DRYRSEFGFVLEGRRILVDDIRVRGCGRASLFTEPDIAEAT 674


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 272 DMELILPQFFTRYLLQQIRPASKASELSCSYSSDTKCT 159
           D   + PQ F   L QQ +P S  +  SC Y+S+   T
Sbjct: 100 DYTQLQPQKFL--LSQQQQPQSALTSQSCKYASEGPST 135


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 182 YSSDTKCTHSGKSSTF 135
           Y+S TK TH+ KS T+
Sbjct: 474 YNSKTKSTHTPKSITY 489


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 629 RGPCSGRYCTMQAVIGEGGPLHAASQT 549
           + P S R      ++G  GPLH A  T
Sbjct: 174 QAPSSDRPAQRTRILGLAGPLHGAGCT 200


>AJ302661-1|CAC35526.1|  128|Anopheles gambiae gSG8 protein protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 613 PEHGPLERFGRKVSGLR 663
           P     ER GRKV+GLR
Sbjct: 75  PNRTVQERLGRKVAGLR 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,697
Number of Sequences: 2352
Number of extensions: 17486
Number of successful extensions: 30
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)