Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30558
(726 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondri... 165 7e-40
UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondri... 164 2e-39
UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1; Parame... 142 1e-32
UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:... 140 2e-32
UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isofor... 136 4e-31
UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100; ce... 128 1e-28
UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2; Crypto... 113 6e-24
UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2; Firmic... 104 3e-21
UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037; cel... 102 8e-21
UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47; Bacte... 100 7e-20
UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1; Caenorhabd... 95 1e-18
UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2; Bacter... 95 1e-18
UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4; Leucon... 94 3e-18
UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n... 93 6e-18
UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP syntha... 91 3e-17
UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellu... 90 4e-17
UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3; P... 87 6e-16
UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22; cel... 82 2e-14
UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25; Pro... 77 4e-13
UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding ... 72 2e-11
UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6; Prot... 70 7e-11
UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10; Candi... 68 3e-10
UniRef50_A0NUS5 Cluster: Putative uncharacterized protein; n=1; ... 67 4e-10
UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafete... 62 2e-08
UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3; ... 61 2e-08
UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2; ... 59 1e-07
UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4; Dinophyc... 54 3e-06
UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza sativa... 54 5e-06
UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9; Trypanosomat... 53 6e-06
UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplas... 53 8e-06
UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1; Nae... 52 1e-05
UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2; Mycoplas... 51 3e-05
UniRef50_A5IY82 Cluster: ATP synthase alpha chain; n=6; Mycoplas... 50 4e-05
UniRef50_A1FHL5 Cluster: Putative uncharacterized protein; n=3; ... 48 2e-04
UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13; Lis... 48 2e-04
UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3; Gammaprot... 48 2e-04
UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1; Myco... 46 7e-04
UniRef50_Q600H8 Cluster: ATP synthase alpha chain; n=3; Mycoplas... 45 0.002
UniRef50_Q4A6P2 Cluster: ATP synthase alpha chain; n=2; Mycoplas... 45 0.002
UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secreto... 45 0.002
UniRef50_Q971B7 Cluster: V-type ATP synthase alpha chain; n=11; ... 45 0.002
UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12; Candid... 44 0.005
UniRef50_Q98PM2 Cluster: ATP SYNTHASE ALPHA CHAIN; n=1; Mycoplas... 43 0.007
UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep: AT... 43 0.007
UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria... 42 0.012
UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1; Le... 42 0.016
UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1; ... 42 0.021
UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr... 42 0.021
UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1; S... 40 0.047
UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP synt... 40 0.047
UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18; ... 40 0.047
UniRef50_Q6BRW4 Cluster: Debaryomyces hansenii chromosome D of s... 40 0.063
UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul... 40 0.083
UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808, w... 39 0.11
UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria... 39 0.11
UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella denit... 38 0.19
UniRef50_A3IIS5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.19
UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellu... 38 0.25
UniRef50_P74857 Cluster: Probable secretion system apparatus ATP... 38 0.33
UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2; E... 37 0.44
UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10; Bacteri... 37 0.44
UniRef50_A0U258 Cluster: Putative uncharacterized protein; n=16;... 37 0.44
UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37; Cyanobacter... 37 0.44
UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42; ... 37 0.44
UniRef50_A6CBM4 Cluster: Transcription termination factor Rho; n... 37 0.58
UniRef50_Q01D41 Cluster: ATP synthase alpha chain, sodium ion sp... 37 0.58
UniRef50_P38606 Cluster: Vacuolar ATP synthase catalytic subunit... 37 0.58
UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2; A... 37 0.58
UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu... 37 0.58
UniRef50_UPI00004D9CFE Cluster: FH1/FH2 domain-containing protei... 36 0.77
UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatu... 36 1.0
UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria ba... 36 1.0
UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1; M... 36 1.0
UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2; Bacteria... 36 1.0
UniRef50_UPI0000E823B4 Cluster: PREDICTED: similar to vacuolar p... 36 1.3
UniRef50_Q8ZXR2 Cluster: V-type ATP synthase beta chain; n=5; Ar... 36 1.3
UniRef50_Q8TUT0 Cluster: V-type ATP synthase beta chain (EC 3.6.... 36 1.3
UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bactero... 36 1.3
UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasm... 35 1.8
UniRef50_Q5SJE9 Cluster: Transcription termination factor Rho; n... 35 1.8
UniRef50_A3Z0H3 Cluster: V-type ATPase, A subunit; n=5; Bacteria... 35 1.8
UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32; Prote... 35 1.8
UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellul... 35 1.8
UniRef50_UPI00006C0889 Cluster: PREDICTED: hypothetical protein;... 35 2.4
UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n... 35 2.4
UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3; P... 35 2.4
UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10; Enter... 35 2.4
UniRef50_A2Y8N2 Cluster: Putative uncharacterized protein; n=2; ... 35 2.4
UniRef50_Q9PK86 Cluster: V-type ATP synthase beta chain; n=19; B... 35 2.4
UniRef50_P84582 Cluster: ATP synthase subunit alpha; n=1; Populu... 35 2.4
UniRef50_Q9FC33 Cluster: Putative transcription terminator facto... 34 3.1
UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27; Ba... 34 3.1
UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n... 34 3.1
UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n... 34 3.1
UniRef50_A6DIN5 Cluster: Transcription termination factor Rho; n... 34 3.1
UniRef50_Q9YF35 Cluster: V-type ATP synthase alpha chain; n=10; ... 34 3.1
UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27; Bacte... 34 4.1
UniRef50_Q08637 Cluster: V-type sodium ATP synthase subunit B (E... 34 4.1
UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9; Mycoplasm... 33 5.4
UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_A6DY37 Cluster: Nidogen, extracellular region; n=1; Ros... 33 5.4
UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase; ... 33 5.4
UniRef50_A2UKE4 Cluster: Putative uncharacterized protein; n=5; ... 33 5.4
UniRef50_A5B5Q4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_Q5PAF7 Cluster: Elongation factor Ts; n=5; Anaplasmatac... 33 5.4
UniRef50_UPI00015B5329 Cluster: PREDICTED: similar to GA14484-PA... 33 7.2
UniRef50_UPI00015B4CD4 Cluster: PREDICTED: similar to ENSANGP000... 33 7.2
UniRef50_Q98NT5 Cluster: Mlr9748 protein; n=18; Alphaproteobacte... 33 7.2
UniRef50_Q8F7C5 Cluster: Transcription termination factor rho; n... 33 7.2
UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP synt... 33 7.2
UniRef50_A5EEU1 Cluster: Putative Succinate dehydrogenase; n=1; ... 33 7.2
UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secreto... 33 7.2
UniRef50_A3ZQF8 Cluster: Transcription termination factor Rho; n... 33 7.2
UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24; ... 33 7.2
UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9; Chlamy... 33 9.5
UniRef50_A1U1W2 Cluster: Putative uncharacterized protein; n=2; ... 33 9.5
UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma pro... 33 9.5
UniRef50_O94034 Cluster: Nucleotide phosphodiesterase; n=4; Sacc... 33 9.5
UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3; B... 33 9.5
>UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=489; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Homo sapiens
(Human)
Length = 553
Score = 165 bits (402), Expect = 7e-40
Identities = 84/104 (80%), Positives = 93/104 (89%)
Frame = +2
Query: 254 LSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRT 433
LSIGDGIARV+GL+N+QAEEMVEFSSGLKGM+LNLEPDNVGVVVFGNDKLIKEGDIVKRT
Sbjct: 75 LSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRT 134
Query: 434 GAIVDVPVGEQILGRVVDALGNPIDARDQSTRNPV*GSVLRRQV 565
GAIVDVPVGE++LGRVVDALGN ID + P+ GS RR+V
Sbjct: 135 GAIVDVPVGEELLGRVVDALGNAIDG-----KGPI-GSKTRRRV 172
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +3
Query: 573 PVISVR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P ISVR PMQTGIKAVDSLVPIGRGQRELII DRQTGK ++
Sbjct: 181 PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSI 221
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Frame = +3
Query: 45 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHK----AAEISTILEERIL 212
++S R+A +V R LP A VS+ +R H S TH AE+S+ILEERIL
Sbjct: 1 MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL 60
Query: 213 GAAPKADLEETGRV 254
GA DLEETGRV
Sbjct: 61 GADTSVDLEETGRV 74
Score = 35.9 bits (79), Expect = 1.0
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +1
Query: 511 KGPIDTKSRMRVGIKAPGII 570
KGPI +K+R RVG+KAPGII
Sbjct: 161 KGPIGSKTRRRVGLKAPGII 180
>UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=847; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Drosophila
melanogaster (Fruit fly)
Length = 552
Score = 164 bits (398), Expect = 2e-39
Identities = 78/87 (89%), Positives = 84/87 (96%)
Frame = +2
Query: 254 LSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRT 433
LSIGDGIARVYGL NIQA+EMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIK+GDIVKRT
Sbjct: 74 LSIGDGIARVYGLNNIQADEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKQGDIVKRT 133
Query: 434 GAIVDVPVGEQILGRVVDALGNPIDAR 514
GAIVDVPVG+++LGRVVDALGN ID +
Sbjct: 134 GAIVDVPVGDELLGRVVDALGNAIDGK 160
Score = 89.4 bits (212), Expect = 8e-17
Identities = 47/73 (64%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Frame = +3
Query: 39 MSLISARIAGSVARRLPNAATQVS-KXXXXXXXXXSRKLHVSTTHKAAEISTILEERILG 215
MS+ SAR+A SVAR LP AA QV+ K +RKLHV++T ++AEIS ILEERILG
Sbjct: 1 MSIFSARLASSVARNLPKAANQVACKAAYPAASLAARKLHVASTQRSAEISNILEERILG 60
Query: 216 AAPKADLEETGRV 254
APKADLEETGRV
Sbjct: 61 VAPKADLEETGRV 73
Score = 72.9 bits (171), Expect = 7e-12
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +3
Query: 573 PVISVR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P +SVR PMQTGIKAVDSLVPIGRGQRELII DRQTGK AL
Sbjct: 180 PRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 220
Score = 35.9 bits (79), Expect = 1.0
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 511 KGPIDTKSRMRVGIKAPGII 570
KG I+TK R RVGIKAPGII
Sbjct: 160 KGAINTKDRFRVGIKAPGII 179
>UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1;
Paramecium tetraurelia|Rep: ATP synthase subunit alpha -
Paramecium tetraurelia
Length = 612
Score = 142 bits (343), Expect = 1e-32
Identities = 66/85 (77%), Positives = 77/85 (90%)
Frame = +2
Query: 254 LSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRT 433
+SIGDGIARV+GL +QA EMVEFSSG++GMALNLE DNVG+VV GND+ I+EGDIVKRT
Sbjct: 55 ISIGDGIARVFGLTQVQAGEMVEFSSGVRGMALNLETDNVGIVVLGNDREIQEGDIVKRT 114
Query: 434 GAIVDVPVGEQILGRVVDALGNPID 508
GAIVDVP+G ++LGRV DALGNPID
Sbjct: 115 GAIVDVPIGMEMLGRVFDALGNPID 139
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = +3
Query: 573 PVISVR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P SV PMQTG+KAVD LVPIGRGQRELII DRQTGK A+
Sbjct: 161 PRKSVHEPMQTGLKAVDCLVPIGRGQRELIIGDRQTGKTAI 201
>UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:
AtpA intron2 ORF - Marchantia polymorpha (Liverwort)
Length = 1259
Score = 140 bits (340), Expect = 2e-32
Identities = 66/87 (75%), Positives = 78/87 (89%)
Frame = +2
Query: 254 LSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRT 433
+S+GDGIARVYGL IQA EMVEF+SG+KGMALNLE +NVG+V+FG+D IKEGDIVKRT
Sbjct: 33 VSVGDGIARVYGLNKIQAGEMVEFASGVKGMALNLENENVGIVIFGSDTAIKEGDIVKRT 92
Query: 434 GAIVDVPVGEQILGRVVDALGNPIDAR 514
G+IVDVPVG+ +LGRVVDALG PID +
Sbjct: 93 GSIVDVPVGKGMLGRVVDALGVPIDGK 119
Score = 66.5 bits (155), Expect = 6e-10
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +3
Query: 582 SVR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
SV PMQTG+KAVDSLVPIGRGQRELII DRQTGK A+
Sbjct: 142 SVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAI 179
>UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isoform,
mitochondrial precursor; n=20; cellular organisms|Rep:
ATP synthase subunit alpha liver isoform, mitochondrial
precursor - Sus scrofa (Pig)
Length = 148
Score = 136 bits (330), Expect = 4e-31
Identities = 65/74 (87%), Positives = 70/74 (94%)
Frame = +2
Query: 254 LSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRT 433
LSIGDGIARV+G +N QAEEMVEFSSGLKGM+LNLEPDNVGVVVFGNDKLIKEGDIVKRT
Sbjct: 75 LSIGDGIARVHGXRNXQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRT 134
Query: 434 GAIVDVPVGEQILG 475
G IVDVPVG+ +LG
Sbjct: 135 GXIVDVPVGKDLLG 148
Score = 60.1 bits (139), Expect = 5e-08
Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = +3
Query: 45 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHK----AAEISTILEERIL 212
++S R+A +VAR LP A VSK + LH S T AE+S+ILE RIL
Sbjct: 1 MLSVRVAAAVARXLPRRAGXVSKNALGSSFVAAXNLHASNTRLQKTGTAEVSSILEXRIL 60
Query: 213 GAAPKADLEETGRV 254
GA DLEETGRV
Sbjct: 61 GADTSVDLEETGRV 74
>UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100;
cellular organisms|Rep: ATP synthase subunit alpha 1 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 511
Score = 128 bits (309), Expect = 1e-28
Identities = 64/92 (69%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Frame = +2
Query: 254 LSIGDGIARVYGLKNIQAEEMVEFS-SGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKR 430
LSIGDGIARVYGL N+ A EMVEF +GLKGMALNLE DNVGVV+FG+ I+EGD V R
Sbjct: 32 LSIGDGIARVYGLTNVMAGEMVEFEGTGLKGMALNLEADNVGVVLFGDGDSIREGDTVLR 91
Query: 431 TGAIVDVPVGEQILGRVVDALGNPIDARDQST 526
T ++V+VPVG+ +LGRVVD LGNPID R T
Sbjct: 92 TKSVVEVPVGKGLLGRVVDGLGNPIDGRGPLT 123
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = +3
Query: 573 PVISVR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P SV PMQTGIKA+D+LVPIGRGQRELII DRQTGK A+
Sbjct: 139 PRQSVSEPMQTGIKAIDALVPIGRGQRELIIGDRQTGKTAI 179
>UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2;
Cryptosporidium|Rep: ATP synthase subunit alpha -
Cryptosporidium parvum Iowa II
Length = 639
Score = 113 bits (271), Expect = 6e-24
Identities = 52/94 (55%), Positives = 74/94 (78%)
Frame = +2
Query: 233 SRRDWSCLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 412
++R +S+ DGIA+V G+++++ E+VEFSSG KGMALNLE D+VG+V+ G D+ I++
Sbjct: 147 NKRIGQVISVADGIAQVDGIRSVKYGELVEFSSGEKGMALNLENDHVGIVILGEDRNIRK 206
Query: 413 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDAR 514
GD V T IV+ PVG+++LGRVVDALGNPID +
Sbjct: 207 GDQVISTNTIVNCPVGKELLGRVVDALGNPIDGK 240
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +3
Query: 603 TGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
TGIK +DSL+PIG GQRE I+ DRQTGK +L
Sbjct: 270 TGIKFIDSLIPIGLGQREAIVGDRQTGKTSL 300
>UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2;
Firmicutes|Rep: ATP synthase subunit alpha -
Ruminococcus albus
Length = 523
Score = 104 bits (249), Expect = 3e-21
Identities = 56/113 (49%), Positives = 76/113 (67%), Gaps = 7/113 (6%)
Frame = +2
Query: 257 SIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTG 436
++GDGI+RV GL+ + E++EF +G GMA+NLE D VG V+ G ++ I+EG VKRTG
Sbjct: 33 TVGDGISRVNGLEKCMSGELLEFENGTYGMAMNLEQDFVGCVLLGTEEGIREGSNVKRTG 92
Query: 437 AIVDVPVGEQILGRVVDALGNPIDAR----DQSTR---NPV*GSVLRRQVSFP 574
IV VPVGE +LGRVV+ALG PID + TR +P G + R+ V+ P
Sbjct: 93 RIVSVPVGEAMLGRVVNALGAPIDGKGAILTNETRPVESPAFGIITRKSVNRP 145
Score = 62.5 bits (145), Expect = 1e-08
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = +3
Query: 582 SVR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
SV P+QTGIKA+DS++P+GRGQRELII DRQTGK +
Sbjct: 141 SVNRPLQTGIKAIDSMIPVGRGQRELIIGDRQTGKTTI 178
>UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037;
cellular organisms|Rep: ATP synthase subunit alpha -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 799
Score = 102 bits (245), Expect = 8e-21
Identities = 51/93 (54%), Positives = 65/93 (69%)
Frame = +2
Query: 254 LSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRT 433
+S+GDGI V GL N+ E+V F +G++GMALNLE D VGVV+ G+ IKEGD V RT
Sbjct: 33 ISLGDGIVLVDGLDNVMLNEIVRFENGVEGMALNLEEDAVGVVLLGDYSNIKEGDRVYRT 92
Query: 434 GAIVDVPVGEQILGRVVDALGNPIDARDQSTRN 532
IV+VPVG+ +LGRVVDALG +D + N
Sbjct: 93 KRIVEVPVGDVMLGRVVDALGKAVDNKGNIVAN 125
Score = 53.6 bits (123), Expect = 5e-06
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +3
Query: 582 SVR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
SV P++TGI ++D++ PIG+GQRELII DRQTGK +
Sbjct: 142 SVHQPLETGILSIDAMFPIGKGQRELIIGDRQTGKTTI 179
>UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47;
Bacteria|Rep: ATP synthase subunit alpha - Mycobacterium
leprae
Length = 558
Score = 99.5 bits (237), Expect = 7e-20
Identities = 45/87 (51%), Positives = 62/87 (71%)
Frame = +2
Query: 254 LSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRT 433
+ +GD IA V GL ++ +E++EF G+ G+ALNL+ NVG V+ G+ + IKEG VKRT
Sbjct: 35 VDVGDSIAHVEGLPSVMTQELLEFPGGILGVALNLDEHNVGAVILGDFENIKEGQKVKRT 94
Query: 434 GAIVDVPVGEQILGRVVDALGNPIDAR 514
G ++ VPVGE +GRVV+ LG PID R
Sbjct: 95 GDVLSVPVGEAFMGRVVNPLGQPIDGR 121
Score = 59.3 bits (137), Expect = 1e-07
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +3
Query: 582 SVR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
SV+ P+QTGIKA+D++ PIGRGQR+L+I DR+TGK A+
Sbjct: 144 SVKEPLQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAV 181
>UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1;
Caenorhabditis elegans|Rep: Isoform b of Q9XXK1 -
Caenorhabditis elegans
Length = 146
Score = 95.5 bits (227), Expect = 1e-18
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +2
Query: 254 LSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKL 403
LSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+NL+ DNVGVVVFGNDK+
Sbjct: 60 LSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLDVDNVGVVVFGNDKI 109
Score = 34.7 bits (76), Expect = 2.4
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 177 AEISTILEERILGAAPKADLEETGRV 254
+E+S ILEERILG +LEETG+V
Sbjct: 34 SEVSKILEERILGTETGINLEETGKV 59
>UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2;
Bacteria|Rep: ATP synthase subunit alpha -
Propionibacterium acnes
Length = 545
Score = 95.5 bits (227), Expect = 1e-18
Identities = 45/82 (54%), Positives = 57/82 (69%)
Frame = +2
Query: 263 GDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAI 442
GDGIA V GL + A E++ F +G G+ALNLE +GVVV G+ I EG V+ TG +
Sbjct: 39 GDGIAHVEGLPSAMANELLRFENGTMGIALNLEERQIGVVVLGDSDGIDEGSTVRGTGEV 98
Query: 443 VDVPVGEQILGRVVDALGNPID 508
+ VPVGE LGRVVDA+GNP+D
Sbjct: 99 LSVPVGEGYLGRVVDAMGNPVD 120
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/37 (70%), Positives = 34/37 (91%)
Frame = +3
Query: 585 VR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
VR P+QTG+KA+DS++PIGRGQR+LII DR+TGK A+
Sbjct: 147 VREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAI 183
>UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4;
Leuconostocaceae|Rep: ATP synthase subunit alpha -
Leuconostoc durionis
Length = 297
Score = 94.3 bits (224), Expect = 3e-18
Identities = 43/79 (54%), Positives = 59/79 (74%)
Frame = +2
Query: 272 IARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDV 451
IAR GL N + E+V F++G GM NLE VG++V G+ + I+EGD VKRTG +++V
Sbjct: 1 IARATGLANALSGELVTFNNGAYGMVQNLEESEVGIIVLGSSEGIREGDTVKRTGHVMEV 60
Query: 452 PVGEQILGRVVDALGNPID 508
PVGE+++GRVV+ALG PID
Sbjct: 61 PVGEELIGRVVNALGQPID 79
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +3
Query: 582 SVR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
SV P+QTGIKA+D+LVPIGRGQRELII DR+TGK ++
Sbjct: 104 SVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSI 141
>UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1FE1 UniRef100
entry - Canis familiaris
Length = 383
Score = 93.1 bits (221), Expect = 6e-18
Identities = 55/92 (59%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Frame = +2
Query: 242 DWSC-LSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 418
D C LS GDGI R+ GL+N QAEEMV FSS LK M LNLE D + VV + KEGD
Sbjct: 70 DTGCVLSFGDGIVRISGLRNAQAEEMVGFSS-LKCMCLNLEADML--VVLHLEMNTKEGD 126
Query: 419 IVKRTGAIVDVPVGEQILGRVVDALGNPIDAR 514
VKRTGAI+DV VG+++LGRVV A+G+ D R
Sbjct: 127 TVKRTGAIMDVLVGKKLLGRVVGAIGDSKDHR 158
Score = 49.6 bits (113), Expect = 8e-05
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +3
Query: 579 ISVR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNALGY*Y 707
ISV+ PM+TGIKAVDSLVPIG GQ E+ D + L Y Y
Sbjct: 171 ISVQEPMETGIKAVDSLVPIGPGQHEICFSDGSDERKKLYYIY 213
>UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP synthase
alpha chain, mitochondrial precursor; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to ATP synthase alpha
chain, mitochondrial precursor - Canis familiaris
Length = 301
Score = 90.6 bits (215), Expect = 3e-17
Identities = 43/57 (75%), Positives = 48/57 (84%)
Frame = +2
Query: 344 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDAR 514
M+LNL PD VGVVVFGNDKLIKEGDIVKRT A VDVPVG+++ G VVDALGN D +
Sbjct: 1 MSLNLGPDKVGVVVFGNDKLIKEGDIVKRTEATVDVPVGKELPGHVVDALGNATDGK 57
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +3
Query: 573 PVISVR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P ISVR PM+TGIKAVDSLVPIGRGQ ELII + QTGK ++
Sbjct: 77 PPISVREPMKTGIKAVDSLVPIGRGQHELIISNWQTGKTSI 117
Score = 34.7 bits (76), Expect = 2.4
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 511 KGPIDTKSRMRVGIKAPGIISP 576
KGPI +K+ RVG+K PGII P
Sbjct: 57 KGPIGSKTHRRVGLKGPGIIPP 78
>UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellular
organisms|Rep: ATP synthase subunit alpha - Rhodococcus
sp. (strain RHA1)
Length = 547
Score = 90.2 bits (214), Expect = 4e-17
Identities = 42/89 (47%), Positives = 59/89 (66%)
Frame = +2
Query: 266 DGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIV 445
DGIA V GL + A E++EF G+ G+ALNL+ +G V+ G+ + I+EG VKRTG ++
Sbjct: 39 DGIAHVSGLPSAMANELLEFPGGILGVALNLDATEIGAVILGDYENIQEGQEVKRTGDVL 98
Query: 446 DVPVGEQILGRVVDALGNPIDARDQSTRN 532
VPVG+ LGRV++ LG PID + N
Sbjct: 99 SVPVGDAFLGRVINPLGQPIDGLGEIESN 127
Score = 56.8 bits (131), Expect = 5e-07
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 594 PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P+QTGIKA+D++ PIGRGQR+L+I DR+TGK A+
Sbjct: 148 PLQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAV 181
>UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3;
Proteobacteria|Rep: F0F1 ATP synthase subunit alpha -
Marinobacter sp. ELB17
Length = 549
Score = 86.6 bits (205), Expect = 6e-16
Identities = 39/85 (45%), Positives = 61/85 (71%)
Frame = +2
Query: 254 LSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRT 433
+ +GDG+A V GL A+E++ F+SG++G+ L+LEP +GV++ G + I+ G+ V+RT
Sbjct: 68 IEVGDGVAVVTGLARALADELLIFASGVRGIVLDLEPGRLGVILLGPSEHIRLGEDVRRT 127
Query: 434 GAIVDVPVGEQILGRVVDALGNPID 508
++ VPVG +LGRVVDA+G P D
Sbjct: 128 RKVISVPVGPALLGRVVDAVGLPRD 152
Score = 54.0 bits (124), Expect = 4e-06
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +3
Query: 594 PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P+ TGIKA+D+ VP+G GQRELII DRQTGK ++
Sbjct: 181 PLATGIKAIDAAVPVGLGQRELIIGDRQTGKTSI 214
>UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22;
cellular organisms|Rep: ATP synthase subunit alpha 2 -
Rhodoferax ferrireducens (strain DSM 15236 / ATCC
BAA-621 / T118)
Length = 534
Score = 81.8 bits (193), Expect = 2e-14
Identities = 39/86 (45%), Positives = 56/86 (65%)
Frame = +2
Query: 257 SIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTG 436
SI GIA+V GL + +E+V+F L G+A N++ +GVV+ G + GD V RTG
Sbjct: 39 SIATGIAKVSGLPGVGFDELVKFPGDLFGIAFNVDEAEIGVVLLGEYWHLHAGDEVDRTG 98
Query: 437 AIVDVPVGEQILGRVVDALGNPIDAR 514
++DV VG+ +LGRV+D LG P+D R
Sbjct: 99 RVMDVAVGDGLLGRVIDPLGRPLDGR 124
Score = 58.8 bits (136), Expect = 1e-07
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 594 PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P+QTG+K +D+L+P+GRGQRELI+ DRQTGK A+
Sbjct: 151 PLQTGLKVIDALIPVGRGQRELILGDRQTGKTAI 184
>UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Burkholderia mallei (Pseudomonas mallei)
Length = 670
Score = 77.0 bits (181), Expect = 4e-13
Identities = 36/83 (43%), Positives = 52/83 (62%)
Frame = +2
Query: 260 IGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGA 439
+ DGIA V GL++ E++ F G+ G A L+ D + VV+ D ++ V RTGA
Sbjct: 45 VADGIAFVSGLEDTMLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAVARTGA 104
Query: 440 IVDVPVGEQILGRVVDALGNPID 508
+++VP G Q+LGRVVD LG P+D
Sbjct: 105 VLEVPAGPQLLGRVVDPLGRPLD 127
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +3
Query: 594 PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P+ TG+ VD+L IGRGQRELII DR TGK +L
Sbjct: 156 PLDTGVLIVDALFTIGRGQRELIIGDRATGKTSL 189
>UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding
subunit alpha of ATP synthase; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Strongly similar to ATPA gene
encoding subunit alpha of ATP synthase - Candidatus
Kuenenia stuttgartiensis
Length = 498
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/85 (41%), Positives = 53/85 (62%)
Frame = +2
Query: 254 LSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRT 433
LS+GDGI + GL++ + E++ F SG +G++ +L D++ VV+ I+ GD +T
Sbjct: 32 LSVGDGIVHIAGLRDAKLYELILFESGDEGISFDLGVDSIAVVLLTGRNGIRAGDTAYKT 91
Query: 434 GAIVDVPVGEQILGRVVDALGNPID 508
I V E +LGRV+ ALGNPID
Sbjct: 92 DRIASVNATEGLLGRVLGALGNPID 116
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/34 (58%), Positives = 28/34 (82%)
Frame = +3
Query: 594 PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P+ TGIK +DS++ IG+GQRELII D TGK+++
Sbjct: 145 PLYTGIKVIDSMLAIGKGQRELIIGDPSTGKSSI 178
>UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Methylococcus capsulatus
Length = 503
Score = 69.7 bits (163), Expect = 7e-11
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +2
Query: 257 SIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTG 436
S+GDGIA V GL + ++++ F G + L +G V+ + + G + G
Sbjct: 42 SVGDGIAWVTGLPSAAMDDVLMFEDGSWAVVFALTKKRIGAVLLHQSENLTAGTPARLAG 101
Query: 437 AIVDVPVGEQILGRVVDALGNPID-ARDQSTRN 532
+DVPVGE +LGRV+D +GNP+D R TRN
Sbjct: 102 RTLDVPVGETLLGRVIDPIGNPLDGGRPLETRN 134
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +3
Query: 585 VR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
V+ P+ TG + VD+LVPIG+GQR+LII D TG+++L
Sbjct: 151 VQQPLYTGTRLVDTLVPIGKGQRQLIIGDEGTGRSSL 187
>UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10;
Candidatus Carsonella ruddii|Rep: ATP synthase alpha
subunit - Carsonella ruddii
Length = 481
Score = 67.7 bits (158), Expect = 3e-10
Identities = 29/83 (34%), Positives = 50/83 (60%)
Frame = +2
Query: 260 IGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGA 439
I D + V GLKN + EM+ FS +KG+ +L NV +++ N + +G+ T
Sbjct: 10 IYDSVVEVLGLKNAKYGEMILFSKNIKGIVFSLNKKNVNIIILNNYNELTQGEKCYCTNK 69
Query: 440 IVDVPVGEQILGRVVDALGNPID 508
I +VPVG+Q++GR++++ G +D
Sbjct: 70 IFEVPVGKQLIGRIINSRGETLD 92
Score = 56.4 bits (130), Expect = 7e-07
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +3
Query: 582 SVR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
+V P+ TGIK++DS++PIG+GQRELII DRQTGK +
Sbjct: 117 TVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTI 154
>UniRef50_A0NUS5 Cluster: Putative uncharacterized protein; n=1;
Stappia aggregata IAM 12614|Rep: Putative
uncharacterized protein - Stappia aggregata IAM 12614
Length = 577
Score = 67.3 bits (157), Expect = 4e-10
Identities = 31/85 (36%), Positives = 53/85 (62%)
Frame = -3
Query: 508 INRVSQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQVKGHSLEA* 329
++RV++ V + L+D + +D LD ++FF+ V + T++V FQV+GH+L+
Sbjct: 290 VDRVAERVDDAAQKALADWHFHDGAGPLDGVAFFNVTVGAEDNDTNVVGFQVQGHALDTT 349
Query: 328 GELHHLLSLDVLQAINTSDTITNAQ 254
E H SLD++Q INT DT+T+ +
Sbjct: 350 REFDHFTSLDLVQTINTGDTVTDGE 374
>UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafeteria
roenbergensis|Rep: ATP synthase subunit alpha -
Cafeteria roenbergensis
Length = 601
Score = 61.7 bits (143), Expect = 2e-08
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 16/99 (16%)
Frame = +2
Query: 260 IGDGIARVYGLKNIQAEEMVEF-----------SSG-----LKGMALNLEPDNVGVVVFG 391
+ DG+A V L N++ E+V F S G ++GM + +E D + V++FG
Sbjct: 55 VKDGVAFVTRLGNVRFSELVSFIPAPSRLKSLRSKGNSNLIVEGMVVGIEQDYISVIIFG 114
Query: 392 NDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 508
+++ +K GD V+ G IV + VG +LGRV+D LGN +D
Sbjct: 115 DERFVKVGDRVRPRGNIVAINVGIGLLGRVIDPLGNVLD 153
Score = 52.8 bits (121), Expect = 8e-06
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +3
Query: 582 SVR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
SV P+ TG+ VDS+VPIG GQRELII DRQ GK A+
Sbjct: 198 SVNKPLLTGLNCVDSMVPIGLGQRELIIGDRQVGKTAV 235
>UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3;
Alphaproteobacteria|Rep: Putative uncharacterized
protein - Dinoroseobacter shibae DFL 12
Length = 950
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/85 (31%), Positives = 52/85 (61%)
Frame = -3
Query: 508 INRVSQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQVKGHSLEA* 329
+ RV+Q+++ + ++ G+V+D LD+++F D V + + THIV F+V+GH +A
Sbjct: 703 VQRVAQAIHDPAQQRVAHGHVHDGLGALDDVAFLDVPVRAEDHDTHIVDFEVQGHPADAA 762
Query: 328 GELHHLLSLDVLQAINTSDTITNAQ 254
EL H L V+Q ++ + + +A+
Sbjct: 763 RELDHFTGLHVVQPVDPCNPVADAE 787
>UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 680
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/88 (30%), Positives = 52/88 (59%)
Frame = -3
Query: 508 INRVSQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQVKGHSLEA* 329
++RV+++V + + L+D +V+D LD ++F + V + + IV +V+GH+ A
Sbjct: 456 VDRVAEAVDHAAEQTLADRHVHDGAGPLDGLAFLNLTVGAEDHDADIVLLEVEGHAAHAR 515
Query: 328 GELHHLLSLDVLQAINTSDTITNAQTRP 245
EL HL LDV++A++ D + + + P
Sbjct: 516 LELDHLTGLDVVEAVDAGDAVADREHLP 543
>UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4;
Dinophyceae|Rep: ATPase CF1 alpha subunit - Amphidinium
carterae (Dinoflagellate)
Length = 464
Score = 54.4 bits (125), Expect = 3e-06
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +3
Query: 582 SVR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
SV P+ TGI ++D+++PIGRGQRELII DRQTGK ++
Sbjct: 116 SVCEPLATGIVSIDAMIPIGRGQRELIIGDRQTGKTSI 153
>UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza
sativa|Rep: Ribosomal protein S2 - Oryza sativa subsp.
indica (Rice)
Length = 483
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +3
Query: 582 SVR*PMQTGIKAVDSLVPIGRGQRELIICDRQT 680
SV PMQTG+KAVDSLVPIGRG+RELII R+T
Sbjct: 270 SVHEPMQTGLKAVDSLVPIGRGRRELIIGGRKT 302
>UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9;
Trypanosomatidae|Rep: ATPase alpha subunit - Leishmania
major
Length = 574
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/31 (70%), Positives = 28/31 (90%)
Frame = +3
Query: 603 TGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
TG KAVD+++PIGRGQRELI+ DRQTGK ++
Sbjct: 175 TGFKAVDTMIPIGRGQRELIVGDRQTGKTSI 205
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +2
Query: 341 GMALNLEPDN-VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 505
G+ NLE D +G+++ N ++ G V TG ++ +PVG +LG+VV+ LG+ +
Sbjct: 80 GLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVVNPLGHEV 135
>UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplasma
mobile|Rep: ATP synthase alpha chain - Mycoplasma mobile
Length = 516
Score = 52.8 bits (121), Expect = 8e-06
Identities = 22/38 (57%), Positives = 32/38 (84%)
Frame = +3
Query: 582 SVR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
S+ P+QTGI ++D L+P+G+GQRELII DR+TGK ++
Sbjct: 122 SLNEPVQTGIASIDMLIPLGKGQRELIIGDRRTGKTSV 159
>UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1;
Naegleria gruberi|Rep: ATP synthase F1 subunit alpha -
Naegleria gruberi
Length = 550
Score = 52.0 bits (119), Expect = 1e-05
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +2
Query: 257 SIGDGIARVYGLKNIQAEEMVEFSS---GLKGMALNLEPDNVGVVVF-GNDKLIKEGDIV 424
SI D + GL+N+ E+V+F S L G LNLE V +V+ G +K D+V
Sbjct: 17 SIQDNVIIATGLENVFVGEVVKFKSQESNLLGQVLNLEKSQVRIVMINGQQSHLKSNDLV 76
Query: 425 KRTGAIVDVPVGEQILGRVVDALGNPIDARD 517
RT V G +LGRVV LG + D
Sbjct: 77 YRTYKDVKTKAGYGVLGRVVSPLGECYNEED 107
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +3
Query: 585 VR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
VR P TGI VD L+P+G GQRELII D+ TGK +L
Sbjct: 139 VRVPFLTGINVVDCLIPVGCGQRELIIGDQNTGKTSL 175
>UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2;
Mycoplasma|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma
pulmonis
Length = 529
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/38 (55%), Positives = 32/38 (84%)
Frame = +3
Query: 582 SVR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
+V P++TGI A+D+++PIGRGQ++LII D+ TGK A+
Sbjct: 121 AVNAPLETGITAIDAVLPIGRGQKQLIIGDKGTGKTAI 158
>UniRef50_A5IY82 Cluster: ATP synthase alpha chain; n=6;
Mycoplasmataceae|Rep: ATP synthase alpha chain -
Mycoplasma agalactiae
Length = 524
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 597 MQTGIKAVDSLVPIGRGQRELIICDRQTGK 686
+ TGI A+D L+PIG+GQRELII DRQTGK
Sbjct: 144 LYTGINAIDLLIPIGKGQRELIIGDRQTGK 173
>UniRef50_A1FHL5 Cluster: Putative uncharacterized protein; n=3;
Pseudomonadaceae|Rep: Putative uncharacterized protein -
Pseudomonas putida W619
Length = 601
Score = 48.4 bits (110), Expect = 2e-04
Identities = 29/96 (30%), Positives = 53/96 (55%)
Frame = -3
Query: 547 RPSYGISCRLVPCINRVSQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHI 368
R G++ R ++RV+Q V + L++ N+ D+ L +F + ++ T+ + T+
Sbjct: 421 RVGLGVAQRTF-AVDRVAQCVDDATQQFLTNRNLQDAAGALGAHAFGEGVIGTQDHCTYG 479
Query: 367 VRFQVKGHSLEA*GELHHLLSLDVLQAINTSDTITN 260
V QV+GH+++A EL H DV Q ++ DT+ N
Sbjct: 480 VLLQVQGHAVDAARELDHFAVHDVGQTVDPHDTVGN 515
>UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13;
Listeria|Rep: ATP synthase subunit alpha 1 - Listeria
innocua
Length = 498
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/38 (52%), Positives = 29/38 (76%)
Frame = +3
Query: 582 SVR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
SV P+ TG+ +DS+ PIGRGQR+LI+ +RQ+GK +
Sbjct: 136 SVTRPLNTGLAVIDSITPIGRGQRQLILGNRQSGKTQI 173
Score = 41.9 bits (94), Expect = 0.016
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 260 IGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGA 439
I DG+ GL+N + V +G+ L L + VG+ + I EG V T
Sbjct: 29 ISDGVIFSSGLENAALHQAVTIDGRHRGVILELNEEFVGIGLIDKTNDILEGMSVSVTDH 88
Query: 440 IVDVPVGEQILGRVVDALGNPI-DARDQ 520
++V + E + GR++D G + D D+
Sbjct: 89 FIEVNLFEDMAGRIIDTTGKMLYDVSDE 116
>UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3;
Gammaproteobacteria|Rep: ATP synthase beta chain -
Pseudomonas aeruginosa C3719
Length = 154
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +2
Query: 380 VVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 508
+ G+ + +K G V TGA + VPVG+ LGR++D LGNPID
Sbjct: 53 IAMGSTEGLKRGLNVDSTGAAISVPVGKATLGRIMDVLGNPID 95
>UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1;
Mycoplasma pulmonis|Rep: ATP synthase subunit alpha 2 -
Mycoplasma pulmonis
Length = 513
Score = 46.4 bits (105), Expect = 7e-04
Identities = 18/34 (52%), Positives = 29/34 (85%)
Frame = +3
Query: 594 PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P++TGI ++D L+PIG+GQR+LI+ D +TGK ++
Sbjct: 128 PLETGIFSIDILLPIGKGQRQLILGDSKTGKTSI 161
>UniRef50_Q600H8 Cluster: ATP synthase alpha chain; n=3; Mycoplasma
hyopneumoniae|Rep: ATP synthase alpha chain - Mycoplasma
hyopneumoniae (strain 232)
Length = 512
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = +3
Query: 603 TGIKAVDSLVPIGRGQRELIICDRQTGKNALG 698
TGI A+D PIG GQRELI+ DRQTGK +G
Sbjct: 127 TGIYAIDLFNPIGFGQRELIVGDRQTGKTHIG 158
>UniRef50_Q4A6P2 Cluster: ATP synthase alpha chain; n=2; Mycoplasma
synoviae 53|Rep: ATP synthase alpha chain - Mycoplasma
synoviae (strain 53)
Length = 514
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +3
Query: 603 TGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
TG VD L+PIGRGQR+LII DR+TGK L
Sbjct: 134 TGYVVVDLLIPIGRGQRQLIIGDRKTGKTFL 164
>UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=10; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Thermoanaerobacter tengcongensis
Length = 437
Score = 44.8 bits (101), Expect = 0.002
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +2
Query: 260 IGDGIARVYGLKNIQAEEMVEFSSGLKGMA--LNLEPDNVGVVVFGNDKLIKEGDIVKRT 433
IG I V L NI ++ G + +A + + + V ++ GN + I G V T
Sbjct: 29 IGLTIESVGPLSNIGEICYIKTIDGNEVLAEVVGFKEEKVYLMPLGNMEGIGPGSKVIAT 88
Query: 434 GAIVDVPVGEQILGRVVDALGNPIDAR 514
G + V VG+ +LGRV+D LGNPID +
Sbjct: 89 GQTLKVNVGKSLLGRVLDGLGNPIDGK 115
>UniRef50_Q971B7 Cluster: V-type ATP synthase alpha chain; n=11;
Archaea|Rep: V-type ATP synthase alpha chain -
Sulfolobus tokodaii
Length = 592
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +2
Query: 287 GLKNIQAEEMVEFSS-GLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGE 463
G++ Q E+V S L G +E D + V+ + +K GD V R+GA + V +G
Sbjct: 19 GMREAQMFEVVYVSDLKLVGEITRIEGDRAFIQVYESTDGVKPGDKVYRSGAPLSVELGP 78
Query: 464 QILGRVVDALGNPIDARDQSTRNP 535
++G++ D L P+D+ + + +P
Sbjct: 79 GLIGKIYDGLQRPLDSIAKVSNSP 102
>UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12;
Candidatus Carsonella ruddii|Rep: ATP synthase beta
subunit - Carsonella ruddii
Length = 139
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +2
Query: 371 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 508
V V+ FG+ +K IV TG + PVG+ LGR+++ LGNPID
Sbjct: 49 VRVIAFGDTNGLKRNMIVLDTGKPILTPVGDCTLGRILNILGNPID 94
>UniRef50_Q98PM2 Cluster: ATP SYNTHASE ALPHA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma
pulmonis
Length = 509
Score = 43.2 bits (97), Expect = 0.007
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 597 MQTGIKAVDSLVPIGRGQRELIICDRQTGK 686
+ TGI ++D PIGRGQRE+I+ D+QTGK
Sbjct: 130 LYTGILSIDLFNPIGRGQREIIVGDKQTGK 159
>UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep:
ATPase FliI/YscN - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 443
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +2
Query: 377 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDAR 514
V+ F +K + G V+ GA VPVG+ +LGR++DA GNP+D R
Sbjct: 74 VLPFDTNKPLVTGAPVEPHGASSMVPVGKALLGRIMDAQGNPLDGR 119
>UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=14; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 511
Score = 42.3 bits (95), Expect = 0.012
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +2
Query: 344 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDAR 514
+A +L + V + + + G+ V TG + VPVG + LGR+++ +G PID R
Sbjct: 83 VAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDER 139
>UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1;
Lentisphaera araneosa HTCC2155|Rep: F0F1 ATP synthase
subunit beta - Lentisphaera araneosa HTCC2155
Length = 161
Score = 41.9 bits (94), Expect = 0.016
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +2
Query: 344 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 508
+A +L V + + + + G +V TGA + VPVG+++LGR ++ LG+PID
Sbjct: 51 VAQHLGEGVVRTIALDSTEGLHRGAVVTDTGAGLKVPVGDEVLGRAMNLLGDPID 105
>UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1;
Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
protein - Geobacter bemidjiensis Bem
Length = 519
Score = 41.5 bits (93), Expect = 0.021
Identities = 25/106 (23%), Positives = 47/106 (44%)
Frame = -3
Query: 535 GISCRLVPCINRVSQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQ 356
G+ I+RV+ V + + N+ D D ++F D + + +V +
Sbjct: 388 GVGVDRAEAIDRVTDRVDHAADQGRAYRNLDDLAGQFDRVAFLDLGELAEDRRADVVFLE 447
Query: 355 VKGHSLEA*GELHHLLSLDVLQAINTSDTITNAQTRPVSSRSALGA 218
V+ H+ +A GEL L +++ ++T DT+T+ P S A
Sbjct: 448 VQNHAGDAAGELEELACHRLVKTVDTCDTVTDGDNGPRFGNSYFSA 493
>UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial
precursor; n=1793; root|Rep: ATP synthase subunit
beta-3, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 559
Score = 41.5 bits (93), Expect = 0.021
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +2
Query: 377 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDARDQ 520
+ + G + L++ G V TGA + VPVG LGR+++ LG PID R +
Sbjct: 139 IAMDGTEGLVR-GRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGE 185
>UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1;
Symbiobacterium thermophilum|Rep: Flagellar-specific ATP
synthase - Symbiobacterium thermophilum
Length = 436
Score = 40.3 bits (90), Expect = 0.047
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 365 DNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 508
D + ++ G ++ G V TG + PVG +LGRV+D LGNPID
Sbjct: 62 DRLLLMPLGETDGLRPGWDVIATGGPLQAPVGMGLLGRVIDGLGNPID 109
>UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP
synthase; n=8; cellular organisms|Rep: Beta subunit of
membrane-bound ATP synthase - Buchnera aphidicola
Length = 147
Score = 40.3 bits (90), Expect = 0.047
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 371 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDARD--QSTRN 532
V + G+ +K G IV G + VPVGE LGR+++ LG ID + +S RN
Sbjct: 52 VRTIAMGSSDGLKRGLIVNDLGHYIKVPVGEPTLGRILNVLGETIDNKGLLKSKRN 107
>UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18;
Bacteria|Rep: Flagellum-specific ATP synthase - Bacillus
subtilis
Length = 440
Score = 40.3 bits (90), Expect = 0.047
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +2
Query: 335 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 508
+K + + +N+ ++ + I G IV+ TG + V VG ++G+V+DA G P+D
Sbjct: 58 IKAEVVGFQEENILLMPYLEAASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLD 115
Score = 32.7 bits (71), Expect = 9.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 585 VR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
+R M G++++DSL+ +G+GQR I GK+ L
Sbjct: 140 IREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTL 176
>UniRef50_Q6BRW4 Cluster: Debaryomyces hansenii chromosome D of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome D of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 80
Score = 39.9 bits (89), Expect = 0.063
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +3
Query: 45 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHKAAEISTILEERILGAAP 224
++SAR A R A ++ + + + + ST E+S+ILEERI G +
Sbjct: 1 MLSARPVLRSAARSVAAVSRNLRVKQARPTQLAARCYASTKAAPTEVSSILEERIRGVSD 60
Query: 225 KADLEETGRV 254
+A+L ETGRV
Sbjct: 61 EANLNETGRV 70
>UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular
organisms|Rep: ATP synthase subunit beta - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 504
Score = 39.5 bits (88), Expect = 0.083
Identities = 17/55 (30%), Positives = 33/55 (60%)
Frame = +2
Query: 344 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 508
+A +L ++V + + + + G V TG + VPVG++ LGR+++ +G P+D
Sbjct: 75 VAQHLGENSVRTIAMDSTEGLVRGQKVADTGGPIAVPVGKETLGRIMNVIGEPVD 129
>UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_808, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 106
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 299 IQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLI 406
I A E+VEF G + LNLE +NVGVV+ G+ +I
Sbjct: 71 IMASELVEFEEGTIAITLNLESNNVGVVLMGDGLMI 106
>UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=3027; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Homo sapiens
(Human)
Length = 529
Score = 39.1 bits (87), Expect = 0.11
Identities = 17/46 (36%), Positives = 30/46 (65%)
Frame = +2
Query: 377 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDAR 514
+ + G + L++ G V +GA + +PVG + LGR+++ +G PID R
Sbjct: 111 IAMDGTEGLVR-GQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDER 155
>UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella
denitrificans OS217|Rep: ATPase FliI/YscN - Shewanella
denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Length = 436
Score = 38.3 bits (85), Expect = 0.19
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 594 PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P+ T IKA+DS +PIG+GQR I+ GK+ L
Sbjct: 138 PLTTRIKALDSFIPIGKGQRVGILAGSGVGKSTL 171
Score = 36.7 bits (81), Expect = 0.58
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +2
Query: 350 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDARD 517
+++ V ++ F + I GD + +G + +P+G +LG VVDA G P+D ++
Sbjct: 57 ISISETQVKLMPFQSASGISFGDKLIGSGTSIRLPMGSGMLGHVVDAFGQPLDEQE 112
>UniRef50_A3IIS5 Cluster: Putative uncharacterized protein; n=1;
Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
protein - Cyanothece sp. CCY 0110
Length = 67
Score = 38.3 bits (85), Expect = 0.19
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -1
Query: 507 SIGFPKASTTRPRICSPTGTSTIAPV 430
SIG P+ STTRP I SPTGT I PV
Sbjct: 41 SIGRPRESTTRPTIASPTGTWAIFPV 66
>UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellular
organisms|Rep: ATP synthase subunit beta - Zymomonas
mobilis
Length = 484
Score = 37.9 bits (84), Expect = 0.25
Identities = 16/40 (40%), Positives = 28/40 (70%)
Frame = +2
Query: 395 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDAR 514
D L++ ++V TG+ + VPVG + LGR+++ +G P+D R
Sbjct: 67 DGLVRGQEVVD-TGSEIRVPVGPETLGRIMNVVGRPVDER 105
>UniRef50_P74857 Cluster: Probable secretion system apparatus ATP
synthase ssaN; n=17; Gammaproteobacteria|Rep: Probable
secretion system apparatus ATP synthase ssaN -
Salmonella typhimurium
Length = 433
Score = 37.5 bits (83), Expect = 0.33
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 449 VPVGEQILGRVVDALGNPIDARD 517
VPVGE +LGRV+D G P+D R+
Sbjct: 91 VPVGEALLGRVIDGFGRPLDGRE 113
Score = 32.7 bits (71), Expect = 9.5
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 594 PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P+ TGI+A+DS+ G GQR I GK+ L
Sbjct: 138 PLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTL 171
>UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2;
Erythrobacter|Rep: FliI, Flagellum-specific ATPase -
Erythrobacter sp. NAP1
Length = 450
Score = 37.1 bits (82), Expect = 0.44
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +2
Query: 269 GIARVYGLK-NIQAEEMVEFSSGLKGMA--LNLEPDNVGVVVFGNDKLIKEGDIVKRTGA 439
G+ V GL I + +E SG + +A + + +++ G+ +L++ V+ G+
Sbjct: 33 GLIEVSGLSVPIGSLGAIESDSGDEPLAEVIGFRRGHSLMMLLGDAQLLQPRASVRAIGS 92
Query: 440 IVDVPVGEQILGRVVDALGNPID 508
V VG+ +LGR VD LG PID
Sbjct: 93 PGSVRVGDALLGRAVDGLGQPID 115
>UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10;
Bacteria|Rep: ATPase, FliI/YscN family - Nocardioides
sp. (strain BAA-499 / JS614)
Length = 435
Score = 37.1 bits (82), Expect = 0.44
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 389 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 508
G+ ++ GD V G + +PVGE + GRV+D LG P+D
Sbjct: 72 GDTTGLRVGDHVVNHGEGLRIPVGEALRGRVLDGLGRPMD 111
>UniRef50_A0U258 Cluster: Putative uncharacterized protein; n=16;
Proteobacteria|Rep: Putative uncharacterized protein -
Burkholderia cenocepacia MC0-3
Length = 1630
Score = 37.1 bits (82), Expect = 0.44
Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Frame = -3
Query: 508 INRVSQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQVKGHSLEA* 329
++RV++ V + + +D + ++ LD+++F D V + + V +V+ +
Sbjct: 1406 VDRVAERVDHAADEFRADRDFENAARRLDDVAFRDVFVFAENHRADRVALEVQRETERVA 1465
Query: 328 GELHHLLSLDVLQAINTSDTITN----AQTRPVSSR-SALG-AAPRILSSRMVEISAALW 167
+L H V QA++T DT+ + A V +R AL A ++ R +E+ +L
Sbjct: 1466 RKLEHFALHHVRQAVDTHDTVGHGDHGALVANVCARFKALDPALDQLADLRGIELHYSLL 1525
Query: 166 VVETCSLR 143
+V + + R
Sbjct: 1526 IVNSVACR 1533
>UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37;
Cyanobacteria|Rep: DNA gyrase subunit A - Synechocystis
sp. (strain PCC 6803)
Length = 860
Score = 37.1 bits (82), Expect = 0.44
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Frame = +2
Query: 314 MVEFSSGLK-GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIV----DVPVGEQILGR 478
++ SSG+ GMA N+ P N+G V+ G LI+ +I ++ + D P G QILGR
Sbjct: 168 LINGSSGIAVGMATNIPPHNLGEVIDGAIALIRNPEITEQELMQIIPGPDFPTGAQILGR 227
>UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42;
Bacteria|Rep: Flagellum-specific ATP synthase -
Treponema pallidum
Length = 447
Score = 37.1 bits (82), Expect = 0.44
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +2
Query: 404 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDARDQSTRNPV*GSVLR 556
++ G V GA + VPVG+ +LGRV++A G ID + + P+ VLR
Sbjct: 80 VEVGCAVVAEGAALSVPVGDALLGRVLNAFGKAIDGKGE-IYAPLRSEVLR 129
>UniRef50_A6CBM4 Cluster: Transcription termination factor Rho; n=1;
Planctomyces maris DSM 8797|Rep: Transcription
termination factor Rho - Planctomyces maris DSM 8797
Length = 543
Score = 36.7 bits (81), Expect = 0.58
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 594 PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
PM ++ +D L PIG+GQR L++ +TGK L
Sbjct: 277 PMPITMRIMDMLTPIGKGQRALVVAPPRTGKTML 310
>UniRef50_Q01D41 Cluster: ATP synthase alpha chain, sodium ion
specific; n=2; Ostreococcus|Rep: ATP synthase alpha
chain, sodium ion specific - Ostreococcus tauri
Length = 625
Score = 36.7 bits (81), Expect = 0.58
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 594 PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P+ TG+KAVD L P+GRGQ L+ + TG + L
Sbjct: 196 PLVTGVKAVDVLAPLGRGQCMLVSGEPGTGLSEL 229
>UniRef50_P38606 Cluster: Vacuolar ATP synthase catalytic subunit A;
n=209; cellular organisms|Rep: Vacuolar ATP synthase
catalytic subunit A - Homo sapiens (Human)
Length = 617
Score = 36.7 bits (81), Expect = 0.58
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +2
Query: 329 SGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 508
S L G + LE D + V+ + GD V RTG + V +G I+G + D + P+
Sbjct: 48 SELVGEIIRLEGDMATIQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPLS 107
Query: 509 ARDQSTRN 532
T++
Sbjct: 108 DISSQTQS 115
>UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2;
Aquifex aeolicus|Rep: Flagellum-specific ATP synthase -
Aquifex aeolicus
Length = 443
Score = 36.7 bits (81), Expect = 0.58
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +2
Query: 311 EMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDA 490
E+ S ++G + D V V+ + +++GD V +V G ++G+VVD
Sbjct: 52 EIQSNSRRIRGEVIGFSGDKVLVMPYEPVFGLRKGDKVLLKNELVSTKTGNGVVGKVVDP 111
Query: 491 LGNPID 508
GNP+D
Sbjct: 112 FGNPLD 117
>UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular
organisms|Rep: ATP synthase subunit beta - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 487
Score = 36.7 bits (81), Expect = 0.58
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 395 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDAR 514
D L++ G V+ TG + VPVG LGR+++ +G PID R
Sbjct: 73 DGLVR-GTEVRDTGKQIMVPVGPATLGRILNVVGEPIDER 111
>UniRef50_UPI00004D9CFE Cluster: FH1/FH2 domain-containing protein 3
(Formin homolog overexpressed in spleen 2) (hFHOS2)
(Formactin-2).; n=3; Xenopus tropicalis|Rep: FH1/FH2
domain-containing protein 3 (Formin homolog
overexpressed in spleen 2) (hFHOS2) (Formactin-2). -
Xenopus tropicalis
Length = 1524
Score = 36.3 bits (80), Expect = 0.77
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1
Query: 124 PQWPWHLANYMSQPPTKLPRSPPSSKRGSLEPRPRL 231
P+WP S PPT+L +SPPSS R S +P+PRL
Sbjct: 390 PEWP-------SPPPTRLAQSPPSSSRPS-QPQPRL 417
>UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: ATP
synthase beta chain - Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)
Length = 129
Score = 35.9 bits (79), Expect = 1.0
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 404 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 508
+K G V G + +P+GE+I GRV + +GN ID
Sbjct: 72 LKRGQDVFSLGTTISMPIGEEINGRVFNVVGNTID 106
>UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria
bacterium Ellin345|Rep: ATPase FliI/YscN - Acidobacteria
bacterium (strain Ellin345)
Length = 437
Score = 35.9 bits (79), Expect = 1.0
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +2
Query: 398 KLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID----ARDQSTRNPV*GS 547
K I+ GD V + VG++ILGRV+DA G P+D AR + +R PV GS
Sbjct: 77 KGIRFGDSVVGLAQPPSIAVGDEILGRVLDATGAPLDGITPARPRGSR-PVDGS 129
>UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Flagellum-specific
ATP synthase - Mariprofundus ferrooxydans PV-1
Length = 471
Score = 35.9 bits (79), Expect = 1.0
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 389 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 508
G+ + I GD ++ + VG +LGRV+DA GNP+D
Sbjct: 80 GSTRGIAPGDPIEPLSTTPSIRVGPHLLGRVLDAQGNPMD 119
Score = 34.7 bits (76), Expect = 2.4
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 594 PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
PMQ G++A+D+ +P+G GQR + GK+ L
Sbjct: 148 PMQLGVRAIDACMPMGWGQRMGLFAGAGVGKSTL 181
>UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2;
Bacteria|Rep: ATPase, FliI/YscN family - Solibacter
usitatus (strain Ellin6076)
Length = 449
Score = 35.9 bits (79), Expect = 1.0
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 594 PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P+ TGI+A+D+L+P G+GQR I GK+ L
Sbjct: 141 PLVTGIRAIDALLPCGKGQRIGIFGGSGVGKSTL 174
>UniRef50_UPI0000E823B4 Cluster: PREDICTED: similar to vacuolar
proton-ATPase A-subunit, partial; n=2; Gallus
gallus|Rep: PREDICTED: similar to vacuolar proton-ATPase
A-subunit, partial - Gallus gallus
Length = 262
Score = 35.5 bits (78), Expect = 1.3
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 335 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 505
L G + LE D + V+ ++ GD V RTG + V +G ILG + D + P+
Sbjct: 50 LVGEIIRLEGDMATLQVYEETSGLRVGDPVLRTGQPLSVELGPGILGSIFDGIQRPL 106
>UniRef50_Q8ZXR2 Cluster: V-type ATP synthase beta chain; n=5;
Archaea|Rep: V-type ATP synthase beta chain -
Pyrobaculum aerophilum
Length = 467
Score = 35.5 bits (78), Expect = 1.3
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 371 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 508
V V+ G L +G V+ G + +PV EQ++GR++D G P D
Sbjct: 56 VAQVLGGTLGLPAKGSTVRFYGKTLKIPVSEQLIGRILDGKGQPRD 101
>UniRef50_Q8TUT0 Cluster: V-type ATP synthase beta chain (EC
3.6.3.14) (V-type ATPase subunit B) [Contains: Mka atpB
intein]; n=8; cellular organisms|Rep: V-type ATP
synthase beta chain (EC 3.6.3.14) (V-type ATPase subunit
B) [Contains: Mka atpB intein] - Methanopyrus kandleri
Length = 990
Score = 35.5 bits (78), Expect = 1.3
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = +2
Query: 281 VYGLKNIQAEEMVEFSSGL----KGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIV 445
V G++ + E+VE + +G L D V VF G L V+ TG +
Sbjct: 25 VEGVEGAKYGEVVEVETPTGEVRRGQVLEARRDAAVVQVFEGTSGLDTTSTKVRFTGETL 84
Query: 446 DVPVGEQILGRVVDALGNPID 508
+PV +LGR+++ G PID
Sbjct: 85 RIPVSTDLLGRILNGRGEPID 105
>UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5;
Bacteroides|Rep: ATP synthase subunit beta - Bacteroides
fragilis
Length = 505
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 365 DNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDARDQSTRN 532
+ V V + ++ G V TG + +PVGEQI GR+++ +G+ ID + R+
Sbjct: 57 NTVRTVAMDSTDGLQRGMKVFPTGGPITMPVGEQIKGRLMNVVGDSIDGMKELNRD 112
>UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasma
mobile|Rep: ATP synthase beta chain - Mycoplasma mobile
Length = 784
Score = 35.1 bits (77), Expect = 1.8
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Frame = +2
Query: 275 ARVYGLKNIQAEE----MVEFSSGLKGMALNLEPDN------VGVVVFGNDKLIKEGDIV 424
++VY ++ +AEE V F + + G + LE + V V GN+ +K G V
Sbjct: 307 SQVYKIRIDKAEEEVLPKVIFYADVNGKEIQLEVADIFDKNLVSTFVLGNETGLKIGTKV 366
Query: 425 KRTGAIVDVPVGEQILGRVVDALGNPIDARDQSTRNPV*GSV 550
K + + +++LGRV+D +G + D S PV G++
Sbjct: 367 KSKNQSYAIKISKRLLGRVIDPIGKIL---DDSIATPVHGNM 405
>UniRef50_Q5SJE9 Cluster: Transcription termination factor Rho; n=3;
Bacteria|Rep: Transcription termination factor Rho -
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 426
Score = 35.1 bits (77), Expect = 1.8
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 594 PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P + + +D L PIGRGQR LI+ + GK L
Sbjct: 160 PDELSTRVIDLLAPIGRGQRGLIVAPPKAGKTTL 193
>UniRef50_A3Z0H3 Cluster: V-type ATPase, A subunit; n=5;
Bacteria|Rep: V-type ATPase, A subunit - Synechococcus
sp. WH 5701
Length = 621
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 335 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 505
LK L + VF + + + GD V++TG ++ V +G +L +V D L NP+
Sbjct: 51 LKAEVLRVHGSTADAQVFESTRGVGIGDPVEQTGELLSVKLGPGLLTQVYDGLQNPL 107
>UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32;
Proteobacteria|Rep: Probable ATP synthase spaL -
Salmonella typhimurium
Length = 431
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 579 ISVR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNALGY*YYHQTSS 725
+ VR P+ TG++A+D L+ G GQR I GK L + QT +
Sbjct: 130 VGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTMLMHMLIEQTEA 178
>UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellular
organisms|Rep: ATP synthase subunit beta -
Fervidobacterium islandicum
Length = 472
Score = 35.1 bits (77), Expect = 1.8
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 377 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDARDQ 520
V + D L++ G V+ TG + PVG +LGR+ + +G PID + +
Sbjct: 60 VAMDSTDGLVR-GLEVENTGEPIKAPVGRGVLGRMFNVIGEPIDEQGE 106
>UniRef50_UPI00006C0889 Cluster: PREDICTED: hypothetical protein;
n=3; Homo/Pan/Gorilla group|Rep: PREDICTED: hypothetical
protein - Homo sapiens
Length = 535
Score = 34.7 bits (76), Expect = 2.4
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -2
Query: 386 ILPHPHCQVPS*GPFP*GLRRTPPSPQPGCSSSHKHERYHHQ 261
+L H H VPS P +PP QP S H H+ +HHQ
Sbjct: 19 LLSHSHASVPSKSP-------SPPILQPAGSHPHAHQHHHHQ 53
>UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n=4;
Leptospira|Rep: Flagellum-specific ATP synthase fliI -
Leptospira interrogans
Length = 454
Score = 34.7 bits (76), Expect = 2.4
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 585 VR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
+R + TG++A+D ++ IGRGQR I GK++L
Sbjct: 148 IRDVLMTGVRAIDGILTIGRGQRVGIFSGSGVGKSSL 184
Score = 33.5 bits (73), Expect = 5.4
Identities = 12/28 (42%), Positives = 22/28 (78%)
Frame = +2
Query: 431 TGAIVDVPVGEQILGRVVDALGNPIDAR 514
+G + +PVG+++LGRV++ +G PID +
Sbjct: 97 SGRKLAIPVGKELLGRVLNGVGRPIDKK 124
>UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3;
Planctomycetaceae|Rep: Flagellum-specific ATP synthase -
Rhodopirellula baltica
Length = 467
Score = 34.7 bits (76), Expect = 2.4
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 413 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDARDQS 523
GD V+ + + VG+ + GRV+DA G PID + S
Sbjct: 93 GDRVRLVSRSLTLRVGDSLCGRVIDAFGRPIDGKPLS 129
Score = 33.5 bits (73), Expect = 5.4
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 594 PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P+QTG++A+D+++ G GQR I GK+ L
Sbjct: 153 PLQTGVRAIDAMLTCGVGQRLGIFAGSGVGKSTL 186
>UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10;
Enterobacteriaceae|Rep: Type III secretion protein -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 456
Score = 34.7 bits (76), Expect = 2.4
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 594 PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P+ TG++AVD L+ IG+GQR I GK L
Sbjct: 159 PLPTGLRAVDGLLTIGQGQRVGIFAGAGCGKTTL 192
>UniRef50_A2Y8N2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 234
Score = 34.7 bits (76), Expect = 2.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 194 PRREDPWSRAQG*SRRDWSCLSIGDGIARVYGLKNIQAEEMVEFS 328
P + PW R Q S+RD +GDG+ ++ G+ + ++VE S
Sbjct: 69 PSKRPPWQRPQPPSQRDAPATDVGDGLTKLRGVDDGGYMDVVELS 113
>UniRef50_Q9PK86 Cluster: V-type ATP synthase beta chain; n=19;
Bacteria|Rep: V-type ATP synthase beta chain - Chlamydia
muridarum
Length = 438
Score = 34.7 bits (76), Expect = 2.4
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +2
Query: 350 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDARDQSTR 529
L + V + VFG + GD V G ++V G+ +LGR + G PID +
Sbjct: 44 LRFDAKKVTLQVFGGTSGLSTGDKVVFLGRPMEVVYGDSLLGRRFNGTGKPIDNEEICFG 103
Query: 530 NPV 538
P+
Sbjct: 104 EPI 106
>UniRef50_P84582 Cluster: ATP synthase subunit alpha; n=1; Populus
euphratica|Rep: ATP synthase subunit alpha - Populus
euphratica (Euphrates poplar)
Length = 98
Score = 34.7 bits (76), Expect = 2.4
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 401 LIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDAR 514
+++ GD + R I +PV E LGRV++AL PID R
Sbjct: 7 VLQVGDGIAR---IAQIPVSEAYLGRVINALAKPIDGR 41
>UniRef50_Q9FC33 Cluster: Putative transcription terminator factor;
n=2; Streptomyces|Rep: Putative transcription terminator
factor - Streptomyces coelicolor
Length = 415
Score = 34.3 bits (75), Expect = 3.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 612 KAVDSLVPIGRGQRELIICDRQTGKNAL 695
+ VD L P+G+GQR LI+ +TGK L
Sbjct: 152 RVVDLLAPVGKGQRGLIVAPPKTGKTVL 179
>UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27;
Bacteria|Rep: ATP synthase F1, beta subunit -
Burkholderia mallei (Pseudomonas mallei)
Length = 534
Score = 34.3 bits (75), Expect = 3.1
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 404 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 508
++ G V+ TG + VPVG+ +LGR++ G P D
Sbjct: 97 LRRGAAVRATGGPIRVPVGDAVLGRLLSVTGAPGD 131
>UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n=3;
Clostridiales|Rep: Transcription termination factor Rho
- Clostridium phytofermentans ISDg
Length = 650
Score = 34.3 bits (75), Expect = 3.1
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 600 QTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
Q ++ VD + PIG+GQR +I+ +TGK L
Sbjct: 382 QVAMRMVDLISPIGKGQRGMIVSQPKTGKTTL 413
>UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n=1;
Opitutaceae bacterium TAV2|Rep: Flagellar protein export
ATPase FliI - Opitutaceae bacterium TAV2
Length = 461
Score = 34.3 bits (75), Expect = 3.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 585 VR*PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
+R + TG++A+D+ P+GRGQR + GK+ L
Sbjct: 155 IREALPTGVRALDAFTPLGRGQRLGLFAGSGVGKSTL 191
>UniRef50_A6DIN5 Cluster: Transcription termination factor Rho; n=1;
Lentisphaera araneosa HTCC2155|Rep: Transcription
termination factor Rho - Lentisphaera araneosa HTCC2155
Length = 613
Score = 34.3 bits (75), Expect = 3.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 594 PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P ++ +D +VP+G GQR LI+ +TGK L
Sbjct: 349 PTNHSMRVLDLVVPVGAGQRGLIVAPPRTGKTVL 382
>UniRef50_Q9YF35 Cluster: V-type ATP synthase alpha chain; n=10;
cellular organisms|Rep: V-type ATP synthase alpha chain
- Aeropyrum pernix
Length = 597
Score = 34.3 bits (75), Expect = 3.1
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +2
Query: 248 SCLSIGDGIARVYGLKNIQAEEMVEFSSG-LKGMALNLEPDNVGVVVFGNDKLIKEGDIV 424
S + I + G+ Q EMV L G + D + V+ + +K G+ V
Sbjct: 6 SIVRISGPLVVAEGMSGAQMYEMVYVGEDRLIGEITRIRGDRAFIQVYESTSGLKPGEPV 65
Query: 425 KRTGAIVDVPVGEQILGRVVDALGNPI 505
TGA + V +G +LG + D + P+
Sbjct: 66 VGTGAPLSVELGPGLLGTIYDGVQRPL 92
>UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27;
Bacteria|Rep: Probable ATP synthase y4yI - Rhizobium sp.
(strain NGR234)
Length = 451
Score = 33.9 bits (74), Expect = 4.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 422 VKRTGAIVDVPVGEQILGRVVDALGNPIDARDQ 520
V TG + +VP+G +LGRV+D+ P+D + +
Sbjct: 100 VVSTGRMREVPIGPDLLGRVIDSRCRPLDGKGE 132
>UniRef50_Q08637 Cluster: V-type sodium ATP synthase subunit B (EC
3.6.3.15) (Na(+)- translocating ATPase subunit B); n=14;
cellular organisms|Rep: V-type sodium ATP synthase
subunit B (EC 3.6.3.15) (Na(+)- translocating ATPase
subunit B) - Enterococcus hirae
Length = 458
Score = 33.9 bits (74), Expect = 4.1
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +2
Query: 290 LKNIQAEEMVE--FSSG--LKGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVP 454
+ ++ EE++E +G +G L ++ D V +F G + + V+ G + +
Sbjct: 21 VSGVKYEELIEVRMQNGEIRRGQVLEVQEDKAMVQIFEGTSGINLKNSSVRFLGHPLQLG 80
Query: 455 VGEQILGRVVDALGNPID 508
V E ++GRV D LG P D
Sbjct: 81 VSEDMIGRVFDGLGRPKD 98
>UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9;
Mycoplasmataceae|Rep: ATP SYNTHASE BETA CHAIN -
Mycoplasma pulmonis
Length = 468
Score = 33.5 bits (73), Expect = 5.4
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +2
Query: 356 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDARDQSTRN 532
+ D V ++ + + G +V T ++VPVG+ + +V D LGN ++ D+S +N
Sbjct: 45 ISEDEVRAILIKTSQRVFIGQVVLNTMKKLEVPVGKSSMNKVFDILGNCLN--DKSAKN 101
>UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 765
Score = 33.5 bits (73), Expect = 5.4
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 612 KAVDSLVPIGRGQRELIICDRQTGKNAL 695
+ VD PIG+GQR LI+ +TGK L
Sbjct: 507 RVVDLFAPIGKGQRALIVAQPKTGKTIL 534
>UniRef50_A6DY37 Cluster: Nidogen, extracellular region; n=1;
Roseovarius sp. TM1035|Rep: Nidogen, extracellular
region - Roseovarius sp. TM1035
Length = 936
Score = 33.5 bits (73), Expect = 5.4
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Frame = +2
Query: 305 AEEMVEFSSGLKGM-ALNLEPDNVGVVVFGNDKLIKEGD----IVKRTGAI-VDVPVGEQ 466
A E+ +F S G + E D +V G D ++ GD ++ R G + +DV + E+
Sbjct: 429 ATEIEDFGSVAVGNDRIFREGDTYIIVYAGADNVVGNGDSQVRVIVRDGRVDIDVRLNEE 488
Query: 467 ILGRVVDALGN-PIDARDQSTRNPV*GSVLRRQVSFPRDFCALTYADW 607
+LGR+ LG+ DA + R G+VL R +F D DW
Sbjct: 489 LLGRLEGLLGDGDGDASNDVARAD--GTVLARPFAF-ADLYGQYREDW 533
>UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase;
n=1; candidate division TM7 genomosp. GTL1|Rep:
Sodium-transporting two-sector ATPase - candidate
division TM7 genomosp. GTL1
Length = 495
Score = 33.5 bits (73), Expect = 5.4
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +2
Query: 281 VYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVG 460
V GL I MV F SG +GM ++ + +V+ + G + I VG
Sbjct: 49 VKGLDGIAVGAMVLFESGQRGMVRDVNAETA-LVLNLEAETTPLGTLAVLQDNIPTTRVG 107
Query: 461 EQILGRVVDALGNPID 508
E ++GR+V L P+D
Sbjct: 108 EGLIGRIVTPLCRPLD 123
>UniRef50_A2UKE4 Cluster: Putative uncharacterized protein; n=5;
Enterobacteriaceae|Rep: Putative uncharacterized protein
- Escherichia coli B
Length = 559
Score = 33.5 bits (73), Expect = 5.4
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = -3
Query: 496 SQSVYYTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQVKGHSLEA*GELH 317
+QSV +T + ++ N D+ STL+ +F V T T+ V +V+ S+ +
Sbjct: 400 TQSVNHTAQQATANRNFQDTASTLNFHAFGKVSVRTHNNRTYRVALEVQCDSVTVTRQGD 459
Query: 316 HLLSLDVLQAINTSDTIT 263
H + QA+N +T+T
Sbjct: 460 HFTLHTIGQAVNADNTVT 477
>UniRef50_A5B5Q4 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1855
Score = 33.5 bits (73), Expect = 5.4
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 94 LLPRCQRWRYPQWPWHLANYMSQPPTKLPRSPPSSKRGSLEP 219
L+ R RW YP +PW L++Y S+ L + PSS R +P
Sbjct: 1567 LMERWARWEYPVFPWILSDYSSK---YLDLADPSSYRDLSKP 1605
>UniRef50_Q5PAF7 Cluster: Elongation factor Ts; n=5;
Anaplasmataceae|Rep: Elongation factor Ts - Anaplasma
marginale (strain St. Maries)
Length = 291
Score = 33.5 bits (73), Expect = 5.4
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Frame = +2
Query: 257 SIGDGIARVYGLKNIQA-----EEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDI 421
++G+GI R L ++A E ++EF+ L + +P++V V ND + +E +I
Sbjct: 161 AVGEGIGRAGALVALEATTAKTEALLEFARQLAMHIVAAKPESVSVETLSNDLVEREREI 220
Query: 422 VKRTGAIVDVPVGEQILGRVVD 487
V + + P E + ++VD
Sbjct: 221 VAKQVEALGKP--ESVASKIVD 240
>UniRef50_UPI00015B5329 Cluster: PREDICTED: similar to GA14484-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA14484-PA - Nasonia vitripennis
Length = 341
Score = 33.1 bits (72), Expect = 7.2
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 341 GMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 508
G L + V VF G + + + TG I+ PV E +LGRV + G PID
Sbjct: 68 GQVLEVSGSKAVVQVFEGTSGIDAKNTHCEFTGDILRTPVSEDMLGRVFNGSGKPID 124
>UniRef50_UPI00015B4CD4 Cluster: PREDICTED: similar to
ENSANGP00000024697; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000024697 - Nasonia
vitripennis
Length = 1018
Score = 33.1 bits (72), Expect = 7.2
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 335 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 505
L G + L D+ + V+ + + GD V+RTG + + + +LG + D + P+
Sbjct: 449 LLGEVIRLNGDSATIQVYEDTSGLAVGDPVRRTGRPLSIELAPGLLGSIFDGIQRPL 505
>UniRef50_Q98NT5 Cluster: Mlr9748 protein; n=18;
Alphaproteobacteria|Rep: Mlr9748 protein - Rhizobium
loti (Mesorhizobium loti)
Length = 149
Score = 33.1 bits (72), Expect = 7.2
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -3
Query: 112 FDTWVAALGKRLATEPAIRAEISD 41
+D +V+ALG+RLA PA+R EI D
Sbjct: 115 YDAFVSALGRRLAKGPALRQEIPD 138
>UniRef50_Q8F7C5 Cluster: Transcription termination factor rho;
n=54; cellular organisms|Rep: Transcription termination
factor rho - Leptospira interrogans
Length = 482
Score = 33.1 bits (72), Expect = 7.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 594 PMQTGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
P + +D + PIG+GQR LI+ +TGK L
Sbjct: 217 PSMLDTRILDLMCPIGKGQRALIVAPPRTGKTIL 250
>UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP
synthase; n=16; Gammaproteobacteria|Rep: Beta subunit of
membrane-bound ATP synthase - Buchnera aphidicola
Length = 147
Score = 33.1 bits (72), Expect = 7.2
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +2
Query: 371 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDAR 514
V + G + G V G + VPVG LGR+V+ LG PID +
Sbjct: 52 VRTIAMGASDGLSRGLSVLDLGHGIKVPVGISTLGRIVNVLGCPIDMK 99
>UniRef50_A5EEU1 Cluster: Putative Succinate dehydrogenase; n=1;
Bradyrhizobium sp. BTAi1|Rep: Putative Succinate
dehydrogenase - Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182)
Length = 578
Score = 33.1 bits (72), Expect = 7.2
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = +2
Query: 299 IQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGR 478
+QA +++ SG G+ N G V ++ +G + RTGA + G I G+
Sbjct: 8 MQAFDVIVVGSGAAGLTAAWHARNRGASVL----VVNKG-MAGRTGATITTGGGVSIAGQ 62
Query: 479 VVDALGNPIDARDQ 520
+ ALG P DA D+
Sbjct: 63 TLQALGLPGDASDR 76
>UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=4; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Pelotomaculum thermopropionicum SI
Length = 446
Score = 33.1 bits (72), Expect = 7.2
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 389 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 508
G K I +G V +G + VGE +LGRV++ LG P+D
Sbjct: 77 GELKGIYQGCSVTPSGRPFTIKVGEGLLGRVLNGLGEPMD 116
>UniRef50_A3ZQF8 Cluster: Transcription termination factor Rho; n=2;
Planctomycetaceae|Rep: Transcription termination factor
Rho - Blastopirellula marina DSM 3645
Length = 444
Score = 33.1 bits (72), Expect = 7.2
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 612 KAVDSLVPIGRGQRELIICDRQTGKNAL 695
+ VD L P+G+GQR L++ +TGK L
Sbjct: 181 RIVDLLTPLGKGQRALVVAPPRTGKTML 208
>UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24;
Epsilonproteobacteria|Rep: Flagellum-specific ATP
synthase - Helicobacter pylori (Campylobacter pylori)
Length = 434
Score = 33.1 bits (72), Expect = 7.2
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 317 VEFSSGLK--GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDA 490
+E S G + GM + E + G F + + GD V ++ PVG +LGRV++
Sbjct: 46 IEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNP 105
Query: 491 LGNPID 508
LG ID
Sbjct: 106 LGQVID 111
>UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9;
Chlamydiaceae|Rep: Virulence ATPase, putative -
Chlamydia muridarum
Length = 434
Score = 32.7 bits (71), Expect = 9.5
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 603 TGIKAVDSLVPIGRGQRELIICDRQTGKNAL 695
TGI+A+D+L+ IG GQR I + GK++L
Sbjct: 143 TGIRAIDALLTIGEGQRVGIFSEPGGGKSSL 173
>UniRef50_A1U1W2 Cluster: Putative uncharacterized protein; n=2;
Marinobacter|Rep: Putative uncharacterized protein -
Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 /
VT8)(Marinobacter hydrocarbonoclasticus (strain DSM
11845))
Length = 329
Score = 32.7 bits (71), Expect = 9.5
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2
Query: 401 LIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDARD 517
L K D++ + A D P Q+LGRV ALG P +ARD
Sbjct: 235 LEKSRDLLVKLVATYDEPSDWQLLGRVELALGRPEEARD 273
>UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma
proteobacterium HTCC2080|Rep: ATPase FliI/YscN - marine
gamma proteobacterium HTCC2080
Length = 477
Score = 32.7 bits (71), Expect = 9.5
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 281 VYGLKN-IQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPV 457
V GL++ I + +++ ++ + D + ++ G+ + ++ G V+ +PV
Sbjct: 47 VAGLRSPIGSRCLIQGKVPVEAEVIGFHGDRLVMMCEGSAEGLRPGARVEPLEGSDRIPV 106
Query: 458 GEQILGRVVDALGNPID 508
G +LGRV+D G P+D
Sbjct: 107 GPGLLGRVIDGAGRPLD 123
>UniRef50_O94034 Cluster: Nucleotide phosphodiesterase; n=4;
Saccharomycetales|Rep: Nucleotide phosphodiesterase -
Candida albicans (Yeast)
Length = 571
Score = 32.7 bits (71), Expect = 9.5
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = -3
Query: 439 STSTLDNISFFDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLS 305
+TS LDN+ F DK ++ +++ TH+ ++G + + G+L+ +S
Sbjct: 75 NTSKLDNLPFSDKSLLIQFFFTHLNILMIQGENSDE-GKLYQEIS 118
>UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3;
Borrelia burgdorferi group|Rep: Flagellum-specific ATP
synthase - Borrelia burgdorferi (Lyme disease
spirochete)
Length = 436
Score = 32.7 bits (71), Expect = 9.5
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 404 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDARDQSTRN 532
I+ G+ V +++ + +++LGRV+D+LG PID + N
Sbjct: 78 IEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLNN 120
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,583,232
Number of Sequences: 1657284
Number of extensions: 16693300
Number of successful extensions: 51343
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 47968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51236
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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