Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30558
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    27   0.15 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   1.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   3.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   5.8  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   7.7  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +1

Query: 97  LPRCQRWRYPQWPWHLANYMSQPPTKLPRSPPSSKRGSLEPRP 225
           +P C  W   +        +  PPT  PR    S+R    PRP
Sbjct: 228 VPECADWYKGRLTDEQLKELENPPTPKPRPTKVSRRKPRPPRP 270


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 585 QKSRGNDTWRLNTDPHTGFRVDWSLASIGF 496
           Q  +G D W        G+RV++S AS  F
Sbjct: 574 QYDQGEDRWLCTLLLQRGYRVEYSAASDAF 603


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 585 QKSRGNDTWRLNTDPHTGFRVDWSLASIGF 496
           Q  +G D W        G+RV++S AS  F
Sbjct: 807 QYDQGEDRWLCTLLLQRGYRVEYSAASDAF 836


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 585 QKSRGNDTWRLNTDPHTGFRVDWSLASIGF 496
           Q  +G D W        G+RV++S AS  F
Sbjct: 807 QYDQGEDRWLCTLLLQRGYRVEYSAASDAF 836


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 585 QKSRGNDTWRLNTDPHTGFRVDWSLASIGFPKA 487
           Q  +G D W        G+RV++S AS  +  A
Sbjct: 834 QYDQGEDRWLCTLLLQRGYRVEYSAASDAYTHA 866


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 585 QKSRGNDTWRLNTDPHTGFRVDWSLASIGFPKA 487
           Q  +G D W        G+RV++S AS  +  A
Sbjct: 834 QYDQGEDRWLCTLLLQRGYRVEYSAASDAYTHA 866


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 585 QKSRGNDTWRLNTDPHTGFRVDWSLASIGFPKA 487
           Q  +G D W        G+RV++S AS  +  A
Sbjct: 834 QYDQGEDRWLCTLLLQRGYRVEYSAASDAYTHA 866


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 585 QKSRGNDTWRLNTDPHTGFRVDWSLASIGFPKA 487
           Q  +G D W        G+RV++S AS  +  A
Sbjct: 834 QYDQGEDRWLCTLLLQRGYRVEYSAASDAYTHA 866


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +1

Query: 580 FLCVDLCRLVSRLLTLWYQL 639
           F C  LC+  ++   LWY +
Sbjct: 155 FRCTKLCKEANKTAFLWYHI 174


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -1

Query: 192  WWRSRQLCGWLRHVVCE 142
            W + R++C W +   CE
Sbjct: 1137 WNKERKICDWPKSAKCE 1153


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +2

Query: 290 LKNIQAEEMVEFSSGLKGMALNLEPD 367
           +KN     +++F+ GLK + +++  D
Sbjct: 575 IKNFNIPSILQFNDGLKNLEIHVTKD 600


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/21 (42%), Positives = 17/21 (80%)
 Frame = -2

Query: 626 RVNSLDTSLHRSTHRNHGEMI 564
           ++++L+TSL  STH N G+++
Sbjct: 190 KISNLNTSLIHSTHLN-GDIV 209


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 562 GIISP*FLCVDLCRLVSRLLTLWYQL 639
           GI+S  FLC  + + V  +L+  Y+L
Sbjct: 164 GILSTIFLCDTILKKVDDILSQAYKL 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,509
Number of Sequences: 336
Number of extensions: 4020
Number of successful extensions: 22
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)