Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30557
(699 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23230.1 68414.m02906 expressed protein 34 0.079
At5g28120.1 68418.m03396 hypothetical protein 30 1.3
At3g30816.1 68416.m03949 hypothetical protein 30 1.7
At2g06860.1 68415.m00768 Ulp1 protease family protein contains P... 30 1.7
At4g36890.1 68417.m05230 glycosyl transferase family 43 protein ... 29 2.2
At4g22460.1 68417.m03244 protease inhibitor/seed storage/lipid t... 29 2.2
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 29 3.0
At4g05300.1 68417.m00803 hypothetical protein 29 3.9
At4g09190.1 68417.m01520 F-box family protein contains Pfam PF00... 28 5.2
At1g64030.1 68414.m07252 serpin family protein / serine protease... 28 5.2
At1g51830.1 68414.m05843 leucine-rich repeat protein kinase, put... 28 5.2
At5g28110.1 68418.m03395 hypothetical protein 28 6.8
At4g21900.1 68417.m03166 MATE efflux family protein similar to r... 28 6.8
At3g56140.1 68416.m06240 expressed protein At2g40400 - Arabidops... 28 6.8
At5g39080.1 68418.m04728 transferase family protein similar to a... 27 9.0
At5g05320.1 68418.m00573 monooxygenase, putative (MO3) similar t... 27 9.0
At1g68550.2 68414.m07832 AP2 domain-containing transcription fac... 27 9.0
At1g68550.1 68414.m07831 AP2 domain-containing transcription fac... 27 9.0
At1g47500.1 68414.m05272 RNA-binding protein 47 (RBP47), putativ... 27 9.0
>At1g23230.1 68414.m02906 expressed protein
Length = 1615
Score = 34.3 bits (75), Expect = 0.079
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = -2
Query: 464 YVNIDVFLYKRSTRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVS 312
Y+N D FL + + +SA E+S++ Q AAA G S T ++S+ VS
Sbjct: 126 YINWDTFL----PSLLSSVSAAEASLSQGVQAAAATAGSSATSSQSVVPVS 172
>At5g28120.1 68418.m03396 hypothetical protein
Length = 506
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = -2
Query: 437 KRSTRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASR 285
++S R STRISA+E + S KGES T+ RR++ K + +R
Sbjct: 342 EKSVRGSTRISASEHTQGSPIDAILPIKGES-TKNGVTRRITNGKVHGGNR 391
>At3g30816.1 68416.m03949 hypothetical protein
Length = 342
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -2
Query: 437 KRSTRVSTRISATESSITSEAQTAAAAKGESTTE--TESIRRVSAAKGNAASRK 282
K+S R STRISA+E + S KGEST T I +GN +++
Sbjct: 179 KKSVRGSTRISASEHTQGSPMDAILPIKGESTKNGVTRWITNGKVHRGNRWTKR 232
>At2g06860.1 68415.m00768 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 938
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 434 RSTRVSTRISATESSITSEAQTAAAAKGESTT--ETESIRRVSAAKGNAASRK 282
+S R STRISA+E + S KGEST E+ RR KG++ +
Sbjct: 843 KSVRGSTRISASEHTQGSPMDAILPVKGESTKNGHGETDRRSVRPKGDSTDNQ 895
>At4g36890.1 68417.m05230 glycosyl transferase family 43 protein low
similarity to Galactosylgalactosylxylosylprotein
3-beta-glucuronosyltransferase 1, Homo sapiens
[SP|Q9P2W7], Rattus norvegicus [SP|O35789]; contains
Pfam domain Glycosyltransferase family 43 [PF03360]
Length = 525
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 131 PVWLWPMAALNLQWDTATPLPEVTQEASALPLSAADTELLLWW 259
P W+ +LN +PL + + PL + ++LLWW
Sbjct: 381 PEWVKDFGSLNENEGVESPLSLLKDPSMVEPLGSCGRQVLLWW 423
>At4g22460.1 68417.m03244 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein contains Pfam
profile: PF00234 protease inhibitor/seed storage/LTP
family
Length = 133
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 491 TSSYPCVAPPQKHYKIIFIKAPTPPTPTCPHNFL 592
T S C PP KH K +PTP T TCP + L
Sbjct: 24 TRSTNCPPPPGKHNKQK--PSPTPTTGTCPKDAL 55
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = +2
Query: 491 TSSYPCVAPPQKHYKIIFIKAPTPPTP---TCP 580
T + P V PP ++ PTPPTP TCP
Sbjct: 219 TPTPPVVTPPTPTPPVVTPPTPTPPTPIPETCP 251
>At4g05300.1 68417.m00803 hypothetical protein
Length = 387
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -2
Query: 437 KRSTRVSTRISATESSITSEAQTAAAAKGESTT--ETESIRRVSAAKGNAASRK 282
++S R STRISA+E + S KGEST E+ +R KG++ +
Sbjct: 301 EKSVRGSTRISASEHTQGSPMDAILPVKGESTKNGHGETDQRSVRPKGDSTDNQ 354
>At4g09190.1 68417.m01520 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain; similar to Probable
disease resistance RPP8-like protein 2
(Swiss-Prot:Q9MAG6) [Arabidopsis thaliana]
Length = 383
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 494 SSYPCVAPP-QKHYKIIFIKAPTPPTPTCPH 583
SS PCV QKH K+ F +P TCP+
Sbjct: 68 SSRPCVLLIFQKHDKLFFFASPVHQKKTCPN 98
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 442 RNTSMFTYLPQNQLSKDFLVSLRGSTPETLQDHLHQGPNSSHSYLPP*FPIQ 597
R SM+ YLP + D L+ STP L H+ + + P F I+
Sbjct: 235 RKFSMYFYLPDKKDGLDDLLEKMASTPGFLDSHIPTYRDELEKFRIPKFKIE 286
>At1g51830.1 68414.m05843 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase GI:1321686 from [Arabidopsis thaliana]
Length = 675
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 137 WLWPMAALNLQWDTATPLPEVTQEASALPLSAADTELLLWWSFWIPRWPFWRQ-HF 301
W LN+ T LP+ +A PL+A T L + W+ P PF+ HF
Sbjct: 29 WTQVTTNLNVNISTIYELPQSVMSTAATPLNANAT-LNITWTIEPPTTPFYSYIHF 83
>At5g28110.1 68418.m03395 hypothetical protein
Length = 493
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -2
Query: 437 KRSTRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASR 285
++S R S RISA+E + S KGES T+ RR++ K + +R
Sbjct: 342 EKSVRGSIRISASEHTQGSPIDAILPIKGES-TKNGVTRRITNGKVHGGNR 391
>At4g21900.1 68417.m03166 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile PF01554:
MatE
Length = 1094
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = -2
Query: 422 VSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT 276
VS+ IS ESS+T+ A+ AAAKG+ + ++ + A G + R T
Sbjct: 576 VSSGISPNESSVTAVAR-LAAAKGDGDYAFKLVKDLVAVGGVSVPRLRT 623
>At3g56140.1 68416.m06240 expressed protein At2g40400 - Arabidopsis
thaliana, EMBL:AC007020
Length = 745
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = -2
Query: 485 LNWFWGRYVNIDVFLYKRSTRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVS 312
LN ++G ID+ RST + T+ S S SEA + ++TTE ESI +++
Sbjct: 689 LNSYFGTQQWIDL---ARSTGLQTQKSIPASKEISEALEEPTVECDTTTEEESIDKLN 743
>At5g39080.1 68418.m04728 transferase family protein similar to
anthocyanin 5-aromatic acyltransferase from Gentiana
triflora GI:4185599, malonyl CoA:anthocyanin
5-O-glucoside-6'''-O-malonyltransferase from Perilla
frutescens GI:17980232, Salvia splendens GI:17980234;
contains Pfam profile PF02458 transferase family
Length = 463
Score = 27.5 bits (58), Expect = 9.0
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Frame = +1
Query: 67 VSSKRISLVSSKH-KMRAFV-----VLACVAMAYG-RPEPPVGYSYS 186
VSS S SSK ++ FV VL C+ A G P PVGY++S
Sbjct: 271 VSSSSSSTSSSKELRLSTFVIVYSYVLVCIIRARGGEPHRPVGYAFS 317
>At5g05320.1 68418.m00573 monooxygenase, putative (MO3) similar to
GI:3426064; identical to cDNA monooxygenase 3, partial
GI:3426065
Length = 406
Score = 27.5 bits (58), Expect = 9.0
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 380 EAQTAAAAKGESTTETESIRRV-SAAKGNAASRKAT*GSRMTTIATV 243
EA A KGE+ E ES RR+ K A SRK +TT TV
Sbjct: 319 EAMKAKNMKGETEDENESYRRIEDGLKKYAGSRKWRSIDLITTSYTV 365
>At1g68550.2 68414.m07832 AP2 domain-containing transcription
factor, putative contains Pfam profile: PF00847 AP2
domain
Length = 324
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +2
Query: 434 SCTETHLCSRTSP----RTS*AKTSSYPCVAPPQKHYKIIFIKAPTPPTPTCP 580
S +ET CSR+SP S+ CV P + APT PTP P
Sbjct: 175 SSSETSQCSRSSPVVPVEQDDTSASALTCVNNPDD----VSTVAPTAPTPNVP 223
>At1g68550.1 68414.m07831 AP2 domain-containing transcription
factor, putative contains Pfam profile: PF00847 AP2
domain
Length = 324
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +2
Query: 434 SCTETHLCSRTSP----RTS*AKTSSYPCVAPPQKHYKIIFIKAPTPPTPTCP 580
S +ET CSR+SP S+ CV P + APT PTP P
Sbjct: 175 SSSETSQCSRSSPVVPVEQDDTSASALTCVNNPDD----VSTVAPTAPTPNVP 223
>At1g47500.1 68414.m05272 RNA-binding protein 47 (RBP47), putative
similar to DNA binding protein GI:1899187 from
[Nicotiana tabacum]
Length = 434
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +2
Query: 461 RTSPRTS*AKTSSYPCVAPPQKHYKIIFIKAPTPPTPTCPHNFLSNH 601
+TSP YP V PQ Y AP PP P P++ NH
Sbjct: 42 KTSPTPPPPHWMRYPPVLMPQMMY------APPPPMPFSPYHQYPNH 82
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,173,053
Number of Sequences: 28952
Number of extensions: 251235
Number of successful extensions: 960
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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