Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30556
(664 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 154 2e-36
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 147 2e-34
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 140 4e-32
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 136 6e-31
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 130 4e-29
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 125 8e-28
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 122 1e-26
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 122 1e-26
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 116 7e-25
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 111 2e-23
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 107 2e-22
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 107 3e-22
UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole geno... 105 9e-22
UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin re... 105 9e-22
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 96 6e-19
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 96 6e-19
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 91 3e-17
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 88 2e-16
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 87 3e-16
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 85 1e-15
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 85 1e-15
UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa... 82 1e-14
UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1; ... 80 4e-14
UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila melanogaster|... 80 4e-14
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 80 5e-14
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 78 2e-13
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 74 4e-12
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 71 2e-11
UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga m... 69 1e-10
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 66 7e-10
UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2; Thermoprotei... 64 4e-09
UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S riboso... 63 5e-09
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 61 3e-08
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 57 4e-07
UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella nat... 56 1e-06
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 53 5e-06
UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal ... 51 3e-05
UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4; Mycoplas... 48 2e-04
UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus ... 47 5e-04
UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep... 44 0.004
UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis... 43 0.006
UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplas... 43 0.006
UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep: L... 42 0.013
UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4; Mollicut... 40 0.040
UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3; Firmicut... 39 0.093
UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma p... 39 0.12
UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;... 39 0.12
UniRef50_Q4P627 Cluster: Putative uncharacterized protein; n=1; ... 39 0.12
UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S riboso... 38 0.16
UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.16
UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10; Rickett... 38 0.22
UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7; Bacteria... 38 0.28
UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n... 37 0.38
UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellul... 37 0.50
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 36 0.66
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.66
UniRef50_Q7UKH4 Cluster: 30S ribosomal protein S2; n=3; Planctom... 36 0.87
UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5; Bacteria... 36 0.87
UniRef50_A0ZWH6 Cluster: Adipokinetic hormone novel isoform 1 pr... 35 1.5
UniRef50_O27614 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2; Deltaproteob... 35 2.0
UniRef50_UPI0000DC2038 Cluster: UPI0000DC2038 related cluster; n... 34 2.7
UniRef50_A7RNX0 Cluster: Predicted protein; n=4; Nematostella ve... 34 2.7
UniRef50_UPI00015ADE80 Cluster: hypothetical protein NEMVEDRAFT_... 34 3.5
UniRef50_UPI000021D9F7 Cluster: PREDICTED: similar to keratin as... 34 3.5
UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondri... 34 3.5
UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32; Chlamyd... 34 3.5
UniRef50_UPI000155F1D6 Cluster: PREDICTED: similar to keratin as... 33 4.6
UniRef50_A3ZXT5 Cluster: Ribosomal protein S2; n=1; Blastopirell... 33 4.6
UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsi... 33 6.1
UniRef50_Q9GCB9 Cluster: Mitochondrial ribosomal protein S2; n=3... 33 6.1
UniRef50_Q98Q36 Cluster: 30S ribosomal protein S2; n=2; Mycoplas... 33 6.1
UniRef50_Q88VQ6 Cluster: N-acetylmuramoyl-L-alanine amidase; n=2... 33 8.1
UniRef50_Q9SJZ9 Cluster: Putative uncharacterized protein At2g22... 33 8.1
UniRef50_A2GBJ7 Cluster: Putative uncharacterized protein; n=1; ... 33 8.1
UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of s... 33 8.1
UniRef50_O13970 Cluster: Mitochondrial ribosomal protein subunit... 33 8.1
UniRef50_Q83SL4 Cluster: 30S ribosomal protein S2; n=330; Bacter... 33 8.1
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 154 bits (373), Expect = 2e-36
Identities = 72/85 (84%), Positives = 77/85 (90%)
Frame = +2
Query: 254 LSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
+SSR GQRAVLKFAA TGATPIAGRFTPG FTNQIQAAFREPRLL+V DP DHQP+TE
Sbjct: 77 ISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTE 136
Query: 434 ASYVNIPVIALCNTDSPLRFVDIAI 508
ASYVN+P IALCNTDSPLR+VDIAI
Sbjct: 137 ASYVNLPTIALCNTDSPLRYVDIAI 161
Score = 121 bits (292), Expect = 1e-26
Identities = 80/208 (38%), Positives = 117/208 (56%), Gaps = 4/208 (1%)
Frame = +3
Query: 27 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 206
MSG LDVL + EEDV K LAA THLG N++FQME Y+YKR++DG ++INL+RTWEKL+L
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 207 AARAVVAIENPADVFV--SHHGPSVSVLY*SLP--RTPVLRLLRGVSHQVLLLTRFKLHS 374
AARA+VAIENPADV V S + +VL + TP+ + + F+
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 375 VNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH*DLWTLLSMQHQVFPTSIGLMWW 554
+ +V+ H+ + +++ T LC T +P + + ++ S+GLMWW
Sbjct: 121 LLVVTDPR-ADHQPLTEASYVNLPTI--ALCNTDSPLRYVDIAIPCNNK-GAHSVGLMWW 176
Query: 555 LLGT*SVEASWCASPVNQRWDVVVDLFF 638
+L + S W+V+ DL+F
Sbjct: 177 MLAREVLRMRGTISR-EHPWEVMPDLYF 203
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 147 bits (357), Expect = 2e-34
Identities = 68/88 (77%), Positives = 78/88 (88%)
Frame = +2
Query: 245 CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQP 424
CV L+++PFGQRA+LKFA +TGA PIAGRFTPG FTNQIQ AFREPRLLIV D DHQP
Sbjct: 75 CV-LANKPFGQRAILKFAHYTGAFPIAGRFTPGTFTNQIQKAFREPRLLIVSDARSDHQP 133
Query: 425 ITEASYVNIPVIALCNTDSPLRFVDIAI 508
ITEA+YVNIPVIA CNT+SPLR++D+AI
Sbjct: 134 ITEAAYVNIPVIAFCNTNSPLRYIDVAI 161
Score = 109 bits (263), Expect = 4e-23
Identities = 50/81 (61%), Positives = 64/81 (79%)
Frame = +3
Query: 27 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 206
MSGGL+VL++ E+DVTK+LAA THLG NV+ QM YV+K + DG +IN+R+TWEKL+L
Sbjct: 1 MSGGLEVLSMKEDDVTKLLAAGTHLGDSNVDIQMAQYVFKTKGDGVPIINVRKTWEKLLL 60
Query: 207 AARAVVAIENPADVFVSHHGP 269
AAR + AIENPADV V + P
Sbjct: 61 AARVIAAIENPADVCVLANKP 81
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 140 bits (338), Expect = 4e-32
Identities = 67/85 (78%), Positives = 73/85 (85%)
Frame = +2
Query: 254 LSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
+SSR GQRAVLKFAA TGATPIAG FTPG FT+QIQAAFREPRL +V DP DHQP+ E
Sbjct: 157 ISSRNTGQRAVLKFAAATGATPIAGCFTPGTFTSQIQAAFREPRLPVVTDPRVDHQPLME 216
Query: 434 ASYVNIPVIALCNTDSPLRFVDIAI 508
ASYVN+P IALCNTDSPL +VDIAI
Sbjct: 217 ASYVNLPTIALCNTDSPLCYVDIAI 241
Score = 41.9 bits (94), Expect = 0.013
Identities = 38/113 (33%), Positives = 47/113 (41%)
Frame = +3
Query: 12 QISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTW 191
Q + TM G DVL +NEEDV K LAA TH +E + VI+ R T
Sbjct: 106 QETFTMFGAPDVLQMNEEDVLKFLAARTH--SEKLLLAARAIAAIENLADVSVISSRNTG 163
Query: 192 EKLVLAARAVVAIENPADVFVSHHGPSVSVLY*SLPRTPVLRLLRGVSHQVLL 350
++ VL A A F S PR PV+ R V HQ L+
Sbjct: 164 QRAVLKFAAATGATPIAGCFTPGTFTSQIQAAFREPRLPVVTDPR-VDHQPLM 215
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 136 bits (328), Expect = 6e-31
Identities = 66/91 (72%), Positives = 73/91 (80%)
Frame = +2
Query: 236 PR*CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 415
P V +SSR FGQRAVLKFAAHTGATPIAGRFTPG+FTN I +F+EPRL+IV DP D
Sbjct: 70 PEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSD 129
Query: 416 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
Q I EASYVNIPVIAL + DSP FVD+AI
Sbjct: 130 AQAIKEASYVNIPVIALTDLDSPSEFVDVAI 160
Score = 84.2 bits (199), Expect = 3e-15
Identities = 39/65 (60%), Positives = 44/65 (67%)
Frame = +3
Query: 54 LNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIE 233
L ED +LAA THLGA NV E YV+ R DG HVIN+ +TWEKLVLAAR + AI
Sbjct: 9 LTPEDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIP 68
Query: 234 NPADV 248
NP DV
Sbjct: 69 NPEDV 73
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 130 bits (313), Expect = 4e-29
Identities = 60/93 (64%), Positives = 72/93 (77%)
Frame = +2
Query: 236 PR*CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 415
P+ + S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPRLLI+ DP D
Sbjct: 75 PQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTD 134
Query: 416 HQPITEASYVNIPVIALCNTDSPLRFVDIAIHA 514
HQPI E + NIP+IA C+TDSP+RFVDI I A
Sbjct: 135 HQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPA 167
Score = 91.1 bits (216), Expect = 2e-17
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = +3
Query: 48 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 227
L+ E DV M AA HLG +N N+QME YV+KRR DG ++ NL +TWEKL +AAR +VA
Sbjct: 12 LSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVA 71
Query: 228 IENPADVFVSHHGP 269
IENP D+ V P
Sbjct: 72 IENPQDIIVQSARP 85
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 125 bits (302), Expect = 8e-28
Identities = 62/88 (70%), Positives = 70/88 (79%)
Frame = +2
Query: 245 CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQP 424
CV +S+R +G RAVLKFAAHTGAT IAGRFTPG FTN I +REPRL++V DP D Q
Sbjct: 77 CV-VSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIVVTDPRADAQA 135
Query: 425 ITEASYVNIPVIALCNTDSPLRFVDIAI 508
I EAS+VNIPVIALC+TDS L VDIAI
Sbjct: 136 IKEASFVNIPVIALCDTDSILNHVDIAI 163
Score = 93.9 bits (223), Expect = 3e-18
Identities = 39/74 (52%), Positives = 57/74 (77%)
Frame = +3
Query: 33 GGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAA 212
G ++L +ED+ ++LAA H+G++N+ +M+ YV+KRR+DG H++NL +TWEKLVLAA
Sbjct: 5 GRPNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAA 64
Query: 213 RAVVAIENPADVFV 254
R + IENPADV V
Sbjct: 65 RVIATIENPADVCV 78
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 122 bits (293), Expect = 1e-26
Identities = 56/93 (60%), Positives = 71/93 (76%)
Frame = +2
Query: 236 PR*CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 415
P+ + ++RP+GQRAVLKFA +TGA +AGR TPG +TNQ A F EPR+L+V DP D
Sbjct: 94 PQDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTYTNQKDAVFAEPRVLVVTDPRTD 153
Query: 416 HQPITEASYVNIPVIALCNTDSPLRFVDIAIHA 514
QPI+E ++VNIP IA C+TDSPL+ VDIAI A
Sbjct: 154 AQPISETAFVNIPTIAFCDTDSPLKNVDIAIPA 186
Score = 101 bits (243), Expect = 1e-20
Identities = 72/201 (35%), Positives = 103/201 (51%), Gaps = 4/201 (1%)
Frame = +3
Query: 48 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 227
++ E D+ MLAA HLG +NV+FQME YV+KRRADG H+INL +TW+KL+LAAR +VA
Sbjct: 31 MSQKEADIAMMLAAGCHLGTKNVDFQMERYVWKRRADGIHIINLGKTWDKLMLAARVIVA 90
Query: 228 IENPADVFVSHHGPSVSVLY*SLPRTPVLRLLRGVSHQVLLLTRFKLHSVNLVS*LYWTL 407
+ENP DV P + + L G H T K L T
Sbjct: 91 VENPQDVIAQAARPYGQRAVLKFAQYTGAKALAG-RHTPGTYTNQKDAVFAEPRVLVVTD 149
Query: 408 HKT----INPLLKLHMSTFL*LLCATQTPH*DLWTLLSMQHQVFPTSIGLMWWLLGT*SV 575
+T I+ +++ T C T +P ++ + ++ SIG +++LL +
Sbjct: 150 PRTDAQPISETAFVNIPTI--AFCDTDSPLKNVDIAIPANNKA-KQSIGCLYYLLARMVL 206
Query: 576 EASWCASPVNQRWDVVVDLFF 638
+ SP N WDV+VDLFF
Sbjct: 207 QMRGTISPANP-WDVMVDLFF 226
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 122 bits (293), Expect = 1e-26
Identities = 57/91 (62%), Positives = 65/91 (71%)
Frame = +2
Query: 236 PR*CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 415
P V + +P QR LKF +TG T + GRFTPGAFTNQIQ+ F+EPRLLIV DP D
Sbjct: 71 PADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTPGAFTNQIQSGFKEPRLLIVCDPKGD 130
Query: 416 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
HQP+ E S VNIPVI CNTDSPL+ VDI I
Sbjct: 131 HQPVREGSAVNIPVIGFCNTDSPLQCVDIGI 161
Score = 103 bits (248), Expect = 3e-21
Identities = 44/76 (57%), Positives = 59/76 (77%)
Frame = +3
Query: 27 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 206
MSGG++ L L E+D+ M+AA HLG+ N N+QM+ YVY R +G H+I+L +TWEKL+L
Sbjct: 1 MSGGIEALELKEDDIRLMVAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLL 60
Query: 207 AARAVVAIENPADVFV 254
AARA+ AIENPADV +
Sbjct: 61 AARAICAIENPADVVI 76
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 116 bits (278), Expect = 7e-25
Identities = 54/91 (59%), Positives = 68/91 (74%)
Frame = +2
Query: 236 PR*CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 415
P V +S+RP+G RAVLKF+ + G+ PIAGR+ PG TNQI F EPRLL+ DP D
Sbjct: 71 PEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPRLLVATDPRTD 130
Query: 416 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
Q + E+SYV++PVIALC+TDSPL +VDIAI
Sbjct: 131 AQSLRESSYVSLPVIALCDTDSPLNYVDIAI 161
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/76 (43%), Positives = 46/76 (60%)
Frame = +3
Query: 27 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 206
M+ L +E+ + ML A H+G +NV +M YVY R +G H+INL T EKL +
Sbjct: 1 MAAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKV 60
Query: 207 AARAVVAIENPADVFV 254
AARA+V + NP +V V
Sbjct: 61 AARAIVTVSNPEEVVV 76
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 111 bits (266), Expect = 2e-23
Identities = 55/99 (55%), Positives = 66/99 (66%), Gaps = 4/99 (4%)
Frame = +2
Query: 257 SSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEA 436
S+R FGQRA+ KF+ G + +AGRF PG FTNQIQ F +PR+L+V DP D Q EA
Sbjct: 98 STRLFGQRAIFKFSQLVGMSFLAGRFIPGTFTNQIQKKFMQPRVLLVTDPRTDQQAFREA 157
Query: 437 SYVNIPVIALCNTDSPLRFVDIAIHATP----SLPNFYW 541
S VNIPVIA C+TD+PL FVDIAI S+ YW
Sbjct: 158 SLVNIPVIAFCDTDAPLEFVDIAIPCNDRRRYSISMMYW 196
Score = 70.9 bits (166), Expect = 2e-11
Identities = 30/63 (47%), Positives = 44/63 (69%)
Frame = +3
Query: 66 DVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPAD 245
DV K++A H G +N + M+ Y++ R +GT++I+L TWEKL+LAAR + A+ENP D
Sbjct: 34 DVQKLVAMHCHFGTKNRSNAMKKYIHSRTKEGTNIIDLHMTWEKLILAARVIAAVENPQD 93
Query: 246 VFV 254
V V
Sbjct: 94 VTV 96
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 107 bits (258), Expect = 2e-22
Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 4/100 (4%)
Frame = +2
Query: 254 LSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
+++RP QRA+LKF +T AT GRF PG FTN++ + EPRLL+V DP D Q I E
Sbjct: 82 VANRPDAQRAILKFCKYTHATAFPGRFIPGNFTNRMNPNYCEPRLLLVNDPVVDRQAILE 141
Query: 434 ASYVNIPVIALCNTDSPLRFVDIAI---HATP-SLPNFYW 541
ASYVNIP I+LCN+D+ L+F+D+AI + TP S+ YW
Sbjct: 142 ASYVNIPTISLCNSDANLKFIDVAIPCNNKTPMSIGLIYW 181
Score = 81.0 bits (191), Expect = 2e-14
Identities = 35/72 (48%), Positives = 51/72 (70%)
Frame = +3
Query: 54 LNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIE 233
L E DV KML ATTHLG N++ +M+ Y++ R+ DGT V NL++ W K+V AAR +V I+
Sbjct: 15 LKEADVKKMLVATTHLGVRNIDRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILVTID 74
Query: 234 NPADVFVSHHGP 269
+PA++ V + P
Sbjct: 75 DPAEIAVVANRP 86
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 107 bits (256), Expect = 3e-22
Identities = 59/111 (53%), Positives = 76/111 (68%), Gaps = 8/111 (7%)
Frame = +2
Query: 233 EPR*CVRLSSRPFGQRAVLKFAAHTGATPI-AGRFTPGAFTNQIQAA---FREPRLLIVL 400
+P+ + +SSRP GQRAV+KFA +T A+ + R+TPG TNQ +A F+EP+LLIV
Sbjct: 95 QPQDVMVVSSRPIGQRAVIKFAHYTQASSTRSARWTPGTLTNQSNSASGKFQEPQLLIVT 154
Query: 401 DPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI----HATPSLPNFYW 541
DP D Q I EASYVNIPVIAL N+D+PL++VDI I T S+ YW
Sbjct: 155 DPHLDRQAIVEASYVNIPVIALTNSDTPLQYVDIPIPVGNRETKSISMIYW 205
Score = 70.5 bits (165), Expect = 3e-11
Identities = 28/76 (36%), Positives = 49/76 (64%)
Frame = +3
Query: 42 DVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 221
D ++ E+D+ +++A+ H+G + ++F M+ YV R +G++++NL TW+ + LAAR +
Sbjct: 31 DCMSRKEQDIKRLIASQCHVGTKQLHFDMKRYVSHRSDNGSYILNLEETWQHIKLAARVI 90
Query: 222 VAIENPADVFVSHHGP 269
AIE P DV V P
Sbjct: 91 AAIEQPQDVMVVSSRP 106
>UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 201
Score = 105 bits (252), Expect = 9e-22
Identities = 49/80 (61%), Positives = 58/80 (72%)
Frame = +2
Query: 269 FGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVN 448
F Q A+LKFA +TGA IAGR TPG TNQ+Q +F EP LLI+ DP DHQPI E + N
Sbjct: 33 FQQGAILKFAQYTGAHAIAGRHTPGTLTNQLQTSFSEPYLLILTDPITDHQPIKEVALGN 92
Query: 449 IPVIALCNTDSPLRFVDIAI 508
IP IA C+ DSP+R+VDI I
Sbjct: 93 IPTIAFCDIDSPMRYVDIDI 112
>UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin
receptor; n=3; Entamoeba histolytica|Rep: Ribosomal
protein SA (P40) / laminin receptor - Entamoeba
histolytica
Length = 173
Score = 105 bits (252), Expect = 9e-22
Identities = 49/95 (51%), Positives = 64/95 (67%)
Frame = +2
Query: 224 SHREPR*CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 403
S+ P V ++ R RA LKF +TG T +AGRFTPG+FTNQIQ F EPRL+IV D
Sbjct: 78 SNETPSDVVAVAGREMAHRASLKFMKYTGCTAVAGRFTPGSFTNQIQKKFMEPRLIIVSD 137
Query: 404 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
P+ DHQ + E+ Y+N+P I N+D+ L+ V IAI
Sbjct: 138 PSVDHQALRESGYINVPTIGFWNSDNRLKNVGIAI 172
Score = 72.5 bits (170), Expect = 8e-12
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Frame = +3
Query: 42 DVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 221
D+L + ED+ M+A H+GA N+NF ME YVY+R + + NL +TWEKL LAAR +
Sbjct: 15 DILKPSAEDIKMMVACRVHIGATNLNFAMEEYVYERGNNNECIFNLMKTWEKLSLAARVI 74
Query: 222 VAIEN--PADV 248
I N P+DV
Sbjct: 75 AGISNETPSDV 85
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 96.3 bits (229), Expect = 6e-19
Identities = 44/75 (58%), Positives = 56/75 (74%)
Frame = +2
Query: 236 PR*CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 415
P+ + S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPRLLI+ DP D
Sbjct: 72 PQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTD 131
Query: 416 HQPITEASYVNIPVI 460
HQPI E++ P++
Sbjct: 132 HQPIKESALETSPLL 146
Score = 49.6 bits (113), Expect = 7e-05
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +3
Query: 159 GTHVINLRRTWEKLVLAARAVVAIENPADVFVSHHGP 269
G +INL +TWEKL LAAR +VAIENP D+ V P
Sbjct: 46 GIFIINLGKTWEKLQLAARVIVAIENPQDIIVQSARP 82
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 96.3 bits (229), Expect = 6e-19
Identities = 48/92 (52%), Positives = 60/92 (65%)
Frame = +2
Query: 233 EPR*CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 412
EP+ + +S++ FG RAV KFA GA + RFTPG FTN F EPRL+IV DP
Sbjct: 68 EPKDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTNYSIKNFCEPRLMIVCDPNT 127
Query: 413 DHQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
D Q + EA+Y NIP IALC+TD+ L +VD I
Sbjct: 128 DSQAVHEAAYANIPCIALCDTDAHLDYVDCVI 159
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/67 (53%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Frame = +3
Query: 51 ALNEEDVTKM-LAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 227
A + E V KM LAA +LG+ N++F M+ YV+ R DGTHVINL T+EK+ LAAR + A
Sbjct: 6 AADREAVIKMMLAAKVYLGSTNLSFGMKPYVFTCRKDGTHVINLAMTYEKIKLAARMIYA 65
Query: 228 IENPADV 248
+E P DV
Sbjct: 66 VEEPKDV 72
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 90.6 bits (215), Expect = 3e-17
Identities = 44/95 (46%), Positives = 59/95 (62%)
Frame = +2
Query: 224 SHREPR*CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 403
S P+ + +SS Q A++KF+ I ++ PG TN+ F EPRLLI+ D
Sbjct: 60 SIEHPKHIIAVSSNNIHQTAIIKFSQFIQCNCIVDKWIPGKLTNKTSKLFEEPRLLIISD 119
Query: 404 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
P D Q + EASYVNIPVI++CNTDS L ++DIAI
Sbjct: 120 PLLDKQALLEASYVNIPVISVCNTDSFLSYIDIAI 154
Score = 64.9 bits (151), Expect = 2e-09
Identities = 26/64 (40%), Positives = 44/64 (68%)
Frame = +3
Query: 57 NEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIEN 236
NE D+ K+L H+G M+ YV+K+R+DG ++IN+ +T +K+ LAARA+++IE+
Sbjct: 4 NENDIKKLLICNVHIGLSACTQLMKVYVWKKRSDGIYIINILKTIQKIELAARAIISIEH 63
Query: 237 PADV 248
P +
Sbjct: 64 PKHI 67
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 88.2 bits (209), Expect = 2e-16
Identities = 45/85 (52%), Positives = 58/85 (68%)
Frame = +2
Query: 254 LSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
+SSR GQ A+LK AA +GA+P G FT G FT+Q+QA+ RE LL++ DP DH + E
Sbjct: 58 ISSRNSGQWAMLKLAAASGASPTVGHFTSGTFTSQVQASCRELCLLLITDPRADHPFLME 117
Query: 434 ASYVNIPVIALCNTDSPLRFVDIAI 508
A YVN+ IAL N+ SPL + IAI
Sbjct: 118 APYVNLLTIALRNSQSPLHCMGIAI 142
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/59 (42%), Positives = 41/59 (69%)
Frame = +3
Query: 78 MLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFV 254
+L A THLG N +F+M +YKR +G ++NL R++EKL+ A +VA+++P++V V
Sbjct: 1 LLVAGTHLGDTNPDFKMIHSIYKRETNG--ILNLERSYEKLLPVACTIVAVKHPSEVGV 57
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 87.4 bits (207), Expect = 3e-16
Identities = 43/85 (50%), Positives = 55/85 (64%)
Frame = +2
Query: 254 LSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
+S++ FG++ V+KF GATPI GRF PG+FTN +PR+LIV D D Q I E
Sbjct: 82 VSTKTFGRKPVVKFCEAVGATPITGRFIPGSFTNSEVKRVYDPRVLIVSDTYADKQAILE 141
Query: 434 ASYVNIPVIALCNTDSPLRFVDIAI 508
+ Y N+P IA NTD+ L VDIAI
Sbjct: 142 SQYCNLPTIAFVNTDNSLVGVDIAI 166
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 42 DVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRA-DGTHVINLRRTWEKLVLAARA 218
D + + +E V ++ + +HLG + N Y+Y R D ++I++ TWEKL++AARA
Sbjct: 10 DSIKIPDEFVKLLIVSQSHLGGTSTNKSFARYLYGTRPRDRINIIDINATWEKLIIAARA 69
Query: 219 VVAIENPADVFV 254
I++P+ + V
Sbjct: 70 FCGIKHPSSIAV 81
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 85.0 bits (201), Expect = 1e-15
Identities = 42/92 (45%), Positives = 54/92 (58%)
Frame = +2
Query: 233 EPR*CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 412
+P V +S R +G R V KF G P+ GR PG FTN + F E L++V DP
Sbjct: 71 DPSKFVVVSGRQYGHRPVRKFCGLVGCKPMLGRVLPGTFTNPALSHFTEADLMMVTDPRV 130
Query: 413 DHQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
D Q + EA + IPVIALC+TDSP+ VD+ I
Sbjct: 131 DEQAVVEAGTMGIPVIALCDTDSPISNVDLII 162
Score = 36.7 bits (81), Expect = 0.50
Identities = 17/59 (28%), Positives = 35/59 (59%)
Frame = +3
Query: 81 LAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVS 257
LAA +G + + ME ++Y R DG +++++++T E++ +AA+ + + V VS
Sbjct: 21 LAAGIRIGTKMKSKFMEPFIYSARPDGLYLLDVKKTDERIRIAAKMIARYDPSKFVVVS 79
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 85.0 bits (201), Expect = 1e-15
Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Frame = +2
Query: 224 SHREPR*CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 403
S +P+ + ++SRP+ R V KFA G+ + GR PG FTN + + EP++L+V D
Sbjct: 90 SRYDPQDIIVVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTNPYLSTYIEPKVLLVSD 149
Query: 404 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIHAT----PSLPNFYW 541
P D Q I EA+ V IP++A +TD+ + ++D+ I A SL YW
Sbjct: 150 PRTDTQAIKEAAKVGIPIVAFADTDAKIDYIDLIIPANNKGRKSLALLYW 199
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/62 (33%), Positives = 40/62 (64%)
Frame = +3
Query: 69 VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADV 248
V L+A H+G + ME++VY+ RA+G +V+++R+ E+L +AA+ ++ +P D+
Sbjct: 39 VDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAK-FLSRYDPQDI 97
Query: 249 FV 254
V
Sbjct: 98 IV 99
>UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0182600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 223
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +2
Query: 347 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIHA 514
FTNQ+Q +F EPRLLI+ DP DHQPI E++ NIP IA C+TDSP+R+VDI I A
Sbjct: 30 FTNQLQTSFSEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPA 85
>UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1;
Entodinium caudatum|Rep: Putative uncharacterized
protein - Entodinium caudatum
Length = 163
Score = 80.2 bits (189), Expect = 4e-14
Identities = 35/63 (55%), Positives = 47/63 (74%)
Frame = +2
Query: 320 IAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVD 499
+ GR++PG TNQ + EPRLLIV DP D+ I E+SYVN+PVIA+CN+D+ L++VD
Sbjct: 3 VTGRWSPGMLTNQTTKKYVEPRLLIVSDPRTDYNAILESSYVNLPVIAICNSDNMLKYVD 62
Query: 500 IAI 508
AI
Sbjct: 63 CAI 65
>UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila
melanogaster|Rep: GM15484p - Drosophila melanogaster
(Fruit fly)
Length = 92
Score = 80.2 bits (189), Expect = 4e-14
Identities = 44/77 (57%), Positives = 48/77 (62%)
Frame = -1
Query: 253 TNTSAGFSMXXXXXXXXTSFSQVRRKLITWVPSARRL*T*VSIWKLTFSAPRWVVAASIL 74
T S G SM SFSQV +L PSARRL T SIWKLTFS PRWVVA +IL
Sbjct: 2 TKMSEGLSMATMARAASCSFSQVLPRLRMLTPSARRLYTYCSIWKLTFSEPRWVVATNIL 61
Query: 73 VTSSSLRASTSNPPDIV 23
V SSSLR S PPD++
Sbjct: 62 VMSSSLRDRISKPPDML 78
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 79.8 bits (188), Expect = 5e-14
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Frame = +2
Query: 233 EPR*CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 412
EP+ + ++ R + R V KFA TGAT I GRF PG TN ++E +++IV DP
Sbjct: 63 EPQDILVVAQRQYAFRPVAKFAEVTGATAITGRFNPGTLTNPSLKFYKEVKVIIVTDPLA 122
Query: 413 DHQPITEASYVNIPVIALCNTDSPLRFVDIAI----HATPSLPNFYW 541
D Q + EA + IP+IALC+ ++ FVD+ I SL YW
Sbjct: 123 DVQAMKEAVKIGIPIIALCDANNKTDFVDLIIPTNNKGRRSLAVIYW 169
Score = 40.7 bits (91), Expect = 0.031
Identities = 16/53 (30%), Positives = 34/53 (64%)
Frame = +3
Query: 96 HLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFV 254
H+G + + M+ Y++K R DG +++++++T KL++A + + E P D+ V
Sbjct: 18 HIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIVAGKMLARFE-PQDILV 69
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 77.8 bits (183), Expect = 2e-13
Identities = 39/95 (41%), Positives = 56/95 (58%)
Frame = +2
Query: 224 SHREPR*CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 403
SH +P + +SSR +GQ F+ G + GRF PG+ TN F EP ++IV D
Sbjct: 91 SHYDPARILVVSSRQYGQHPARMFSRALGTRAMLGRFIPGSLTNPQIHGFFEPDVIIVTD 150
Query: 404 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
PA D Q + EAS + +PV+ALC+T++ VD+ I
Sbjct: 151 PAGDAQVLKEASSIGVPVVALCDTNNLTSNVDLVI 185
Score = 38.7 bits (86), Expect = 0.12
Identities = 18/62 (29%), Positives = 39/62 (62%)
Frame = +3
Query: 69 VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADV 248
+ + LAA H+G + M +VY+ R DG +V++++ T E++ +A++ +++ +PA +
Sbjct: 40 IDEYLAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDERIRVASK-LLSHYDPARI 98
Query: 249 FV 254
V
Sbjct: 99 LV 100
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 73.7 bits (173), Expect = 4e-12
Identities = 31/92 (33%), Positives = 51/92 (55%)
Frame = +2
Query: 233 EPR*CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 412
EP + +S R + + +F +TG +AGRF PG TN F EP ++ + DP
Sbjct: 64 EPEDILAVSRRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDPRV 123
Query: 413 DHQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
D Q + EA+ + +P++ LC+T+ F+D+ I
Sbjct: 124 DRQALKEATEIGVPIVGLCDTEHLTSFIDLVI 155
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/56 (35%), Positives = 37/56 (66%)
Frame = +3
Query: 81 LAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADV 248
LA+ H+G + ME ++Y+ R+DG +V+++R+T E+L +AA+ + E P D+
Sbjct: 14 LASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYE-PEDI 68
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 71.3 bits (167), Expect = 2e-11
Identities = 37/95 (38%), Positives = 53/95 (55%)
Frame = +2
Query: 224 SHREPR*CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 403
S+ EP + SSR +G+ KFA GA GRF PG TN + EP +++V D
Sbjct: 133 SNYEPEQILAASSRQYGRFPAEKFAEAIGARVRTGRFIPGTLTNPDYDGYIEPDIVVVTD 192
Query: 404 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
P D Q + EA V IPVIA+C++++ VD+ +
Sbjct: 193 PIGDAQAVKEAITVGIPVIAMCDSNNTTSNVDLVV 227
Score = 33.9 bits (74), Expect = 3.5
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 69 VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAA 212
V L A H+G + ME ++++ R DG +V+++ T E++ AA
Sbjct: 82 VEDYLGAGVHIGTQQKTQDMERFIHRVRTDGLYVLDVSMTDERIRTAA 129
>UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S2 -
Caldivirga maquilingensis IC-167
Length = 215
Score = 68.5 bits (160), Expect = 1e-10
Identities = 34/84 (40%), Positives = 45/84 (53%)
Frame = +2
Query: 257 SSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEA 436
S++P+ + + F G P+ GR PG TN + LL+V DP D Q I EA
Sbjct: 82 STKPYAFKPIQMFCKFVGCLPVTGRLIPGTLTNPYLTHHIDIDLLMVADPKTDFQAINEA 141
Query: 437 SYVNIPVIALCNTDSPLRFVDIAI 508
S IPVIAL +TDS F+D+ I
Sbjct: 142 SLTGIPVIALVDTDSDPTFIDLMI 165
Score = 35.1 bits (77), Expect = 1.5
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 69 VTKMLAATTHLGAENVN--FQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPA 242
V + +AA LGA N Q +++ R DG + NL+R E++ +AAR + P+
Sbjct: 18 VERYMAAAVRLGARVSNNYLQERGFIFSVRPDGLRIFNLKRIDERIRIAARMITRYP-PS 76
Query: 243 DVFVSHHGP 269
V V P
Sbjct: 77 RVMVHSTKP 85
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 66.1 bits (154), Expect = 7e-10
Identities = 32/68 (47%), Positives = 45/68 (66%)
Frame = +2
Query: 254 LSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
+SSR + AVL FA TGA IA RFTPG+ TN + F+E R++IV+DP HQ + +
Sbjct: 50 VSSRQYDYCAVLTFAGQTGAINIADRFTPGSSTNYVTRWFKETRVIIVIDPHVSHQAMHK 109
Query: 434 ASYVNIPV 457
A +V+I +
Sbjct: 110 ALFVDIAI 117
Score = 32.7 bits (71), Expect = 8.1
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 3/38 (7%)
Frame = +3
Query: 144 KRRADGTHVINLRRTWEKLVLAAR---AVVAIENPADV 248
+R+ADG+ I + WEK++ AAR VV ++NPA++
Sbjct: 12 RRQADGSFSIG--KKWEKIIFAARILATVVTLKNPAEI 47
>UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2;
Thermoprotei|Rep: Ribosomal protein S2 - Cenarchaeum
symbiosum
Length = 208
Score = 63.7 bits (148), Expect = 4e-09
Identities = 32/77 (41%), Positives = 43/77 (55%)
Frame = +2
Query: 284 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIA 463
+ KFA G I RF PG TN + EP+LL+V DP D Q +TEA+ IPVI
Sbjct: 84 IRKFAELVGCKDIHKRFMPGTLTNPDLPKYMEPKLLLVCDPQVDAQAVTEATNAGIPVIG 143
Query: 464 LCNTDSPLRFVDIAIHA 514
+ N+D+ +D+ I A
Sbjct: 144 IANSDNVTSRLDVIIPA 160
>UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1; Homo
sapiens|Rep: PREDICTED: similar to 40S ribosomal protein
SA (p40) (34/67 kDa laminin receptor) - Homo sapiens
Length = 99
Score = 63.3 bits (147), Expect = 5e-09
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = +2
Query: 284 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDH 418
VLK TGA PIAG FTPG FTNQIQAAF E + L+V DP DH
Sbjct: 45 VLKRTTATGAIPIAGHFTPGNFTNQIQAAFSELQFLVVTDPRADH 89
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +3
Query: 27 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQM 128
MSG LD+L + E+D+ +LAA THLG+ N++FQM
Sbjct: 1 MSGILDILPMKEDDILNLLAAGTHLGSPNLDFQM 34
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +3
Query: 27 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGT-HVINL 179
MSGGL+ LAL E+DV K LA+ H+G+ N++++M Y+YKR+ DG H I L
Sbjct: 1 MSGGLECLALKEDDVQKFLASGAHIGSSNMDYKMAPYIYKRKPDGNIHSIGL 52
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 56.8 bits (131), Expect = 4e-07
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = +2
Query: 224 SHREPR*CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 403
S+ EP + + R + KF+ T GR+ PG TN + EP ++++ D
Sbjct: 58 SYYEPNEILVVGRRETAITPIKKFSEITKVKAFPGRYPPGTLTNPQLKYYMEPEVILITD 117
Query: 404 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIHA----TPSLPNFYW 541
P D + +A I ++ALC+T+ ++D I A + SL YW
Sbjct: 118 PIMDKNALHDAYESGITILALCDTNHTKNYIDFCIPANNRGSKSLALIYW 167
>UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella
natans|Rep: Ribosomal RNA S0 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 211
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/82 (30%), Positives = 44/82 (53%)
Frame = +2
Query: 254 LSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
+ ++ ++A+ + I + PG F+N+ +F P IV +P D + I E
Sbjct: 69 IDTKCISRKAIKQICIALNCRGIFKNYIPGNFSNRQIKSFMLPEAAIVAEPKNDPRIIRE 128
Query: 434 ASYVNIPVIALCNTDSPLRFVD 499
S +NIP+I +CNTD+ + F+D
Sbjct: 129 LSNINIPIIGICNTDTNISFID 150
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 53.2 bits (122), Expect = 5e-06
Identities = 35/83 (42%), Positives = 43/83 (51%)
Frame = +2
Query: 257 SSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEA 436
SSR GQ+AVL FAA G+ P +GRFTPG T+Q+ QP +
Sbjct: 50 SSRTTGQQAVLSFAAAVGSAPTSGRFTPGTLTDQV-------------------QPSLAS 90
Query: 437 SYVNIPVIALCNTDSPLRFVDIA 505
YVN+P IAL + DS DIA
Sbjct: 91 QYVNLPPIALYDADSSWCSADIA 113
Score = 34.7 bits (76), Expect = 2.0
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 96 HLGAENVNFQMETYVYKRRADGTHVIN 176
HL N + Q++ YVYK++ DG +VIN
Sbjct: 1 HLDGTNFDLQIDEYVYKKKRDGMYVIN 27
>UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal
protein SA; n=1; Mus musculus|Rep: PREDICTED: similar to
Ribosomal protein SA - Mus musculus
Length = 181
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/46 (52%), Positives = 29/46 (63%)
Frame = +2
Query: 305 TGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASY 442
TGA P AG F P F N IQA F+ LL+V P + QP+TEAS+
Sbjct: 104 TGAIPTAGSFIPRPFINLIQATFQVTCLLVVTGPKMNQQPLTEASF 149
Score = 37.1 bits (82), Expect = 0.38
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 141 YKRRADGTHVINLRRTWEK-LVLAARAVVAIENPADV 248
Y ++DGT++ L RTWEK L+L A+ VA EN +V
Sbjct: 57 YLEKSDGTYIRYLNRTWEKLLLLEAQTTVANENSTNV 93
>UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pneumoniae
Length = 294
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +2
Query: 347 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIHATPSL 526
F +++ R P LLIV DP + + EA+ + IPV+ALCNT++ VD I A
Sbjct: 162 FFGGVKSLKRLPNLLIVDDPVYEKNAVAEANILRIPVVALCNTNTNPELVDFIIPANNHQ 221
Query: 527 P 529
P
Sbjct: 222 P 222
>UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S2 - Chlorokybus
atmophyticus (Soil alga)
Length = 442
Score = 46.8 bits (106), Expect = 5e-04
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Frame = +2
Query: 374 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIHATP----SLPNFYW 541
+ P L+I L+P Q+ PI EA +NIP+IAL ++++P R + + P SLP Y+
Sbjct: 365 KRPNLIIFLNPNQNEIPIREAFNLNIPIIALVDSNTPPRLLSQITYPIPGAQTSLPFIYF 424
Query: 542 FDVVVVGHVKC*GF 583
F +VV ++ F
Sbjct: 425 FLNLVVKTIQSSNF 438
>UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep:
RpsB - Mycoplasma gallisepticum
Length = 323
Score = 43.6 bits (98), Expect = 0.004
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2
Query: 380 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIHA 514
P +L++ DP ++ +TEA + IPVIALCNT+S + + I A
Sbjct: 201 PHVLVIDDPIKEKNAVTEARKLRIPVIALCNTNSDPNVITLPIPA 245
>UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein S2 - Nephroselmis
olivacea
Length = 235
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/66 (33%), Positives = 39/66 (59%)
Frame = +2
Query: 362 QAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIHATPSLPNFYW 541
Q +P LLIVL+P+++ + I EA +NIPVIA+ ++D+ L + I S F +
Sbjct: 156 QTPISKPDLLIVLNPSKNKEAINEAWVLNIPVIAIVDSDTNLSKITYPIPGNNSSYEFIY 215
Query: 542 FDVVVV 559
+ + ++
Sbjct: 216 YCLNII 221
>UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S2 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 349
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +2
Query: 347 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
F I+ + P +LI++DP D I EA +NIPVIAL NT++ + +D I
Sbjct: 199 FYGGIKNMKQRPDVLILVDPVNDVNAIKEARKLNIPVIALANTNADPQLIDYII 252
>UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep:
LOC204010 protein - Homo sapiens (Human)
Length = 197
Score = 41.9 bits (94), Expect = 0.013
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +2
Query: 284 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP------AQDHQPITEASYV 445
+LKFAA TGATPIAG FTPG F + + L L P +Q H +T +
Sbjct: 1 MLKFAAATGATPIAGHFTPGTFLTRSRQPTGSHGFLWFLTPGLTTSLSQRHLVLTHLPLL 60
Query: 446 NIPVIALC 469
I LC
Sbjct: 61 YATQILLC 68
>UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4;
Mollicutes|Rep: 30S ribosomal protein S2 - Mesoplasma
florum (Acholeplasma florum)
Length = 266
Score = 40.3 bits (90), Expect = 0.040
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +2
Query: 380 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIHATPSL 526
P LIV+DP D + EA +NIPVI LC+T+ V + I A L
Sbjct: 160 PAALIVVDPKSDEIAVKEAIKLNIPVIGLCDTNVDPDIVTLPIPANDDL 208
>UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3;
Firmicutes|Rep: 30S ribosomal protein S2 - Spiroplasma
citri
Length = 359
Score = 39.1 bits (87), Expect = 0.093
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +2
Query: 347 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 478
F I+ P+ L V+DP ++H + EA + IPVIA+C+T+
Sbjct: 148 FLGGIKGMKELPQALFVVDPKEEHIAVREARKLRIPVIAICDTN 191
>UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma
penetrans|Rep: Ribosomal protein S2 - Mycoplasma
penetrans
Length = 367
Score = 38.7 bits (86), Expect = 0.12
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 380 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIHA 514
P+++I+ DP + I EA + IPVIA+CNT++ VD I A
Sbjct: 263 PKVIILTDPEINKIAIKEARNLGIPVIAICNTNANPDLVDYVIPA 307
>UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein - Candida albicans (Yeast)
Length = 460
Score = 38.7 bits (86), Expect = 0.12
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +3
Query: 69 VTKMLAATTHLGAENVNFQ--METYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPA 242
+ K++AA HLG +F+ M+ ++Y D H+I+L +T EKL LA + + +
Sbjct: 238 IAKLMAAGCHLGHSTSSFRPSMQPFIYGIY-DKVHIIDLNKTLEKLTLACKVIEGVVEKG 296
Query: 243 DV--FVSHHGPSVSV 281
V +V H + S+
Sbjct: 297 GVVLYVGTHKNNSSI 311
Score = 32.7 bits (71), Expect = 8.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 377 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 478
+P L+++L+P ++ I E IP I LC+TD
Sbjct: 372 KPDLVVLLNPVENRNCIKECISAGIPTIGLCDTD 405
>UniRef50_Q4P627 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 329
Score = 38.7 bits (86), Expect = 0.12
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +2
Query: 335 TPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 478
T A TN++ + +P L+IVL+P ++ I EA+ NIP IA+ ++D
Sbjct: 238 TGTANTNRLASQTLQPDLVIVLNPIENSFAIREATQANIPTIAITDSD 285
>UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1;
Canis lupus familiaris|Rep: PREDICTED: similar to 40S
ribosomal protein SA (p40) (34/67 kDa laminin receptor)
- Canis familiaris
Length = 160
Score = 38.3 bits (85), Expect = 0.16
Identities = 25/52 (48%), Positives = 29/52 (55%)
Frame = +2
Query: 266 PFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQ 421
P + AV F T A+PI+G F NQ QAA EPRLL+V P DHQ
Sbjct: 7 PVSRAAVCCF---TAASPISG-----TFANQTQAARWEPRLLMVTHPRADHQ 50
>UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 159
Score = 38.3 bits (85), Expect = 0.16
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 368 AFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
+F P + I L +QPI EA+ N P+IA C+TDSP++ V + +
Sbjct: 65 SFPNPSIKITLH----YQPIKEAALGNTPIIAFCDTDSPMQCVALLL 107
>UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10;
Rickettsieae|Rep: 30S ribosomal protein S2 - Rickettsia
prowazekii
Length = 296
Score = 37.9 bits (84), Expect = 0.22
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +2
Query: 377 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
+P LL+V+D ++H I EA +NIPV+A+ +T+S VD I
Sbjct: 161 KPDLLVVIDTNKEHIAINEAVKLNIPVVAVVDTNSNPDNVDYPI 204
>UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7;
Bacteria|Rep: 30S ribosomal protein S2 - Deinococcus
radiodurans
Length = 264
Score = 37.5 bits (83), Expect = 0.28
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 347 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
F I+ R P + V+DP ++ + EA+ + IPVIAL +TDS +D +
Sbjct: 147 FVGGIRKMNRLPDAIFVVDPTKEVIAVQEANKLGIPVIALADTDSDPDVIDYIV 200
>UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n=1;
Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S2 - Cyanidium caldarium
Length = 243
Score = 37.1 bits (82), Expect = 0.38
Identities = 16/56 (28%), Positives = 34/56 (60%)
Frame = +2
Query: 347 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIHA 514
+ N I+ + P ++I++DP+++ I+E +NIP I + +T+ + V++ I A
Sbjct: 146 YLNGIKGMKKPPDIIILVDPSREKTTISECQKLNIPTIGILDTNCNPKSVNVPIPA 201
>UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellular
organisms|Rep: 30S ribosomal protein S2 - Gloeobacter
violaceus
Length = 274
Score = 36.7 bits (81), Expect = 0.50
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +2
Query: 374 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIHA 514
R+P +L+V+D ++ + EA +NIP+++L +T+ D+ I A
Sbjct: 156 RKPDILLVVDQRREQNAVMEARRLNIPIVSLLDTNCDPDLTDVGIPA 202
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 36.3 bits (80), Expect = 0.66
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 416 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
+QPI E + N P+IA C+TDSP++ V + +
Sbjct: 141 YQPIKEVALGNTPIIAFCDTDSPMQCVALLL 171
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 36.3 bits (80), Expect = 0.66
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 416 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
+QPI E + N P+IA C+TDSP++ V + +
Sbjct: 100 YQPIKEVALGNTPIIAFCDTDSPMQCVALLL 130
>UniRef50_Q7UKH4 Cluster: 30S ribosomal protein S2; n=3;
Planctomycetaceae|Rep: 30S ribosomal protein S2 -
Rhodopirellula baltica
Length = 260
Score = 35.9 bits (79), Expect = 0.87
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 353 NQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
N ++ R P ++ ++DP ++ + EA + I +AL +TDS +D+ I
Sbjct: 149 NGLRTMNRLPEVMFIVDPGKERNAVREAKRLGITTVALIDTDSDPSQIDLPI 200
>UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5;
Bacteria|Rep: 30S ribosomal protein S2 - Lactobacillus
plantarum
Length = 267
Score = 35.9 bits (79), Expect = 0.87
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +2
Query: 347 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
F I+ R P ++ ++DP ++ + EA +NIP++A+ +T++ +D+ I
Sbjct: 147 FLGGIEDMPRIPDVIFIVDPRKEQIAVKEAQKLNIPIVAMVDTNTDPDDIDVII 200
>UniRef50_A0ZWH6 Cluster: Adipokinetic hormone novel isoform 1
precursor; n=2; Spodoptera frugiperda|Rep: Adipokinetic
hormone novel isoform 1 precursor - Spodoptera
frugiperda (Fall armyworm)
Length = 74
Score = 35.1 bits (77), Expect = 1.5
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +1
Query: 118 TSRWRPMSTNDVLMVPM*STCVVPGKNLFWLLVLS*PSRTPLMCSS 255
TSRW+ + LM STC V G++ WL V P RT L SS
Sbjct: 4 TSRWKLTCISAALMAHTGSTCAVHGRSWCWLPVRWSPLRTQLTFSS 49
>UniRef50_O27614 Cluster: Putative uncharacterized protein; n=1;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
Putative uncharacterized protein - Methanobacterium
thermoautotrophicum
Length = 334
Score = 35.1 bits (77), Expect = 1.5
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = -2
Query: 417 WSCAGSNTIKRRGSRNAA*IWLVKAPGVKRPAIGVAPVCAANFSTAR*PKGRDERRTHQR 238
WS GS ++R G ++ + + A G PVCA N + +R P R RR R
Sbjct: 119 WSAGGSVEVRRDGPGIEVILYSAEGDEIVSAASGFCPVCAVNIAASRVPSIR--RRMASR 176
Query: 237 GSR 229
SR
Sbjct: 177 KSR 179
>UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2;
Deltaproteobacteria|Rep: Ribosomal protein S2 -
Plesiocystis pacifica SIR-1
Length = 301
Score = 34.7 bits (76), Expect = 2.0
Identities = 12/34 (35%), Positives = 25/34 (73%)
Frame = +2
Query: 380 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDS 481
P + V+DP ++H ++EA+ + +PV+AL +T++
Sbjct: 174 PGAIFVIDPNREHIAVSEANRLGVPVVALADTNA 207
>UniRef50_UPI0000DC2038 Cluster: UPI0000DC2038 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC2038 UniRef100 entry -
Rattus norvegicus
Length = 184
Score = 34.3 bits (75), Expect = 2.7
Identities = 25/99 (25%), Positives = 36/99 (36%)
Frame = +1
Query: 262 TALRSACCTEVCRAHRCYAYCGAFHTRCFY*PDSSCIP*TSSLDCIGPCTRPSTHY*SFI 441
++ R CC + C H C YC C C P CI + ++ +
Sbjct: 57 SSCRGLCCAKGCCCHCCCCYCCCAPVAC---SSECCQP--VQCQCI-QVSCAGSYCVNGN 110
Query: 442 CQHSCDCFVQHRLPTKICGHCYPCNTKSSQLLLV*CGGC 558
C C CF +R P +C +C C + L C C
Sbjct: 111 CCCCCCCFPNYR-PDCLCSYCCVCECVCMCVCLSVCVEC 148
>UniRef50_A7RNX0 Cluster: Predicted protein; n=4; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 267
Score = 34.3 bits (75), Expect = 2.7
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Frame = +1
Query: 310 CYAYCGAF--HTRCFY*PDSSCIP*TSSLDCIGPCTRPSTHY*SFICQHSCDCFVQHR-- 477
C CG + +T P C P + +DC PC IC C C+ +
Sbjct: 92 CTPCCGCWPSNTGVNCTPCCGCWPSNTGVDCT-PCCGCWPSNTGVICTPCCGCWPSNTGV 150
Query: 478 LPTKICGHCYPCNTKSSQLLLV*CGGCW 561
+ T CG C+P NT ++ C GCW
Sbjct: 151 ICTPCCG-CWPSNTG---VICTRCCGCW 174
Score = 33.9 bits (74), Expect = 3.5
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +1
Query: 355 PDSSCIP*TSSLDCIGPCTRPSTHY*SFICQHSCDCFVQHR--LPTKICGHCYPCNTKSS 528
P C P + +DC PC IC C C+ + + T CG C+P NT
Sbjct: 4 PCCGCWPSNTGVDCT-PCCGCWPSNTGVICTPCCGCWPSNTGVICTPCCG-CWPSNTG-- 59
Query: 529 QLLLV*CGGCW 561
++ C GCW
Sbjct: 60 -VICTRCCGCW 69
>UniRef50_UPI00015ADE80 Cluster: hypothetical protein
NEMVEDRAFT_v1g9783; n=1; Nematostella vectensis|Rep:
hypothetical protein NEMVEDRAFT_v1g9783 - Nematostella
vectensis
Length = 117
Score = 33.9 bits (74), Expect = 3.5
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 361 SSCIP*TSSLDCIGPCTRPSTHY*SFICQHSCDCFVQHRLPTKICGHCYP-CNTKSS 528
SSCI S+ DCI C+ PS F C+ +C T++C +C+P C + SS
Sbjct: 6 SSCIG-PSANDCI-TCSDPSNALIGFTCKANCTPGQFKNTATRVCENCHPTCASCSS 60
>UniRef50_UPI000021D9F7 Cluster: PREDICTED: similar to keratin
associated protein 10-7; n=7; Rattus norvegicus|Rep:
PREDICTED: similar to keratin associated protein 10-7 -
Rattus norvegicus
Length = 230
Score = 33.9 bits (74), Expect = 3.5
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +1
Query: 235 TPLMCSSLITALRSACCTEVCRAHRCYAYCGAFHTRCF-Y*PDSSCIP*TS--SLDCIGP 405
TP+ SS + + +CC VC C C + C + C+P +S + C
Sbjct: 143 TPICSSSSSSCCQPSCCAPVCCKPVCCKPCSSLSLLCSPVCRPACCVPTSSCCASSCQPN 202
Query: 406 CTRPSTHY*SFICQHSC 456
C RP++ S +C+ +C
Sbjct: 203 CCRPASCV-SLLCRPAC 218
>UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein MRP4, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 394
Score = 33.9 bits (74), Expect = 3.5
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 377 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDS 481
+P LL+VL+P ++ + EA +P IA+ +TDS
Sbjct: 316 KPDLLVVLNPTENRNALLEAIKSRVPTIAIIDTDS 350
>UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32;
Chlamydiales|Rep: 30S ribosomal protein S2 - Chlamydia
trachomatis
Length = 282
Score = 33.9 bits (74), Expect = 3.5
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 380 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 478
P LLIV+DP + + EA + IPV+AL +T+
Sbjct: 160 PGLLIVIDPGYERIAVAEAGKLGIPVMALVDTN 192
>UniRef50_UPI000155F1D6 Cluster: PREDICTED: similar to keratin
associated protein 9.3; n=1; Equus caballus|Rep:
PREDICTED: similar to keratin associated protein 9.3 -
Equus caballus
Length = 302
Score = 33.5 bits (73), Expect = 4.6
Identities = 29/87 (33%), Positives = 33/87 (37%), Gaps = 5/87 (5%)
Frame = +1
Query: 262 TALRSACCTEVCRAHRCYAYCGAFHTRCFY*PD--SSCIP*TSSLDCIGPCTRPSTHY*S 435
T +S+CC C RC C T C Y P +SC P S C P S+
Sbjct: 23 TCSQSSCCQPCCPQTRCQTTC--CRTTC-YQPTCVTSCRPSCCSAPCCQPTCSESSCCGQ 79
Query: 436 FICQHSC--DCFVQHRLPTKIC-GHCY 507
Q SC C Q R T C CY
Sbjct: 80 TCSQSSCYQPCCPQTRCQTTCCRTTCY 106
>UniRef50_A3ZXT5 Cluster: Ribosomal protein S2; n=1; Blastopirellula
marina DSM 3645|Rep: Ribosomal protein S2 -
Blastopirellula marina DSM 3645
Length = 243
Score = 33.5 bits (73), Expect = 4.6
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 353 NQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
N ++ R P L+++DP ++ I EA + I +AL +TD +D+ +
Sbjct: 153 NGLRTMNRLPETLVIVDPKKEKNAIREAHSLGITTVALTDTDCDPDEIDLPV 204
>UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsia
sennetsu str. Miyayama|Rep: Ribosomal protein S2 -
Neorickettsia sennetsu (strain Miyayama)
Length = 298
Score = 33.1 bits (72), Expect = 6.1
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +2
Query: 380 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 478
P ++ V+DP ++H + EA + IPV+A+ +T+
Sbjct: 162 PNIIFVIDPKKEHIAVEEAWKLGIPVVAVVDTN 194
>UniRef50_Q9GCB9 Cluster: Mitochondrial ribosomal protein S2; n=38;
Magnoliophyta|Rep: Mitochondrial ribosomal protein S2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 219
Score = 33.1 bits (72), Expect = 6.1
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 380 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIHATPS 523
P ++V D + I EAS + IPV+A+ + + PL F + + P+
Sbjct: 131 PDCVVVFDSERKSSVILEASKLQIPVVAIVDPNVPLEFFEKITYPVPA 178
>UniRef50_Q98Q36 Cluster: 30S ribosomal protein S2; n=2;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pulmonis
Length = 330
Score = 33.1 bits (72), Expect = 6.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 377 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIHA 514
+P +IV+DP D + EA + +I + ++D+ FVD+ I A
Sbjct: 176 QPNFMIVVDPNVDRIAVKEARDKGVKIIGILDSDANPDFVDLGIPA 221
>UniRef50_Q88VQ6 Cluster: N-acetylmuramoyl-L-alanine amidase; n=2;
Lactobacillus|Rep: N-acetylmuramoyl-L-alanine amidase -
Lactobacillus plantarum
Length = 282
Score = 32.7 bits (71), Expect = 8.1
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +3
Query: 144 KRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVSHH 263
K RA G HV+ R + E + L+AR +A + AD F+S H
Sbjct: 143 KLRAAGAHVVLTRDSDEYVGLSARPAIANKLHADAFISFH 182
>UniRef50_Q9SJZ9 Cluster: Putative uncharacterized protein
At2g22340; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein At2g22340 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 358
Score = 32.7 bits (71), Expect = 8.1
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 98 SWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC 217
SW LP+GD +Q C WY + S +G+ + C
Sbjct: 188 SWTEASLLPEGDCFIQLNCLWYKPKEDTSVMGRKMASSDC 227
>UniRef50_A2GBJ7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 414
Score = 32.7 bits (71), Expect = 8.1
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -2
Query: 270 KGRDERRTHQRGSRWLRQHEQPEQVFPRYDAS*SHGYHQHVVCRHRSPSGS 118
K RDER+ + SR L Q P + P+ + H YH+H HR+ S
Sbjct: 158 KFRDERQKAHQKSRELPQEALPAKESPKPQSQDHHHYHKHHHHHHRNEQPS 208
>UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 468
Score = 32.7 bits (71), Expect = 8.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 377 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 478
+P L+++L+P ++ I E IP I LC+TD
Sbjct: 362 KPDLIVLLNPVENRNCINECIKQRIPTIGLCDTD 395
>UniRef50_O13970 Cluster: Mitochondrial ribosomal protein subunit
S2; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S2 - Schizosaccharomyces pombe
(Fission yeast)
Length = 263
Score = 32.7 bits (71), Expect = 8.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 380 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIHA 514
P L+++L+P ++ EA ++P I + +TD+ R V I A
Sbjct: 180 PDLMVILNPLENKSACLEAQKTHVPTIGIIDTDADPRMVTYPIPA 224
>UniRef50_Q83SL4 Cluster: 30S ribosomal protein S2; n=330;
Bacteria|Rep: 30S ribosomal protein S2 - Shigella
flexneri
Length = 241
Score = 32.7 bits (71), Expect = 8.1
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 380 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
P L V+D +H I EA+ + IPV A+ +T+S VD I
Sbjct: 158 PDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVI 200
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,136,712
Number of Sequences: 1657284
Number of extensions: 17550207
Number of successful extensions: 47342
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 44936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47285
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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