Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30556
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    27   0.10 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.55 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   5.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   6.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.8  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   6.8  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   6.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.8  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   9.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.0  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   9.0  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 659 FLQGPRLEEQINHNIPALVHGGSTPRSLNTSRAQQP 552
           +LQ   +E+ +NH I  ++ G  T +S +T R   P
Sbjct: 758 YLQIENVEQTLNHEIKKVIPGRITQKSCSTKRYVTP 793


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
 Frame = +1

Query: 403 PCTRPST--HY*SFICQHSCDCFVQHRLPTKICGHCYP 510
           P T P T  H    I Q SC   +Q  L  KI  H YP
Sbjct: 128 PPTLPVTSIHLRGAIGQRSCQVVIQCYLEIKIDEHLYP 165


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 586 HEASTLHVPNNHHIKPIEVGKT 521
           H+A   H P +HH+K    G T
Sbjct: 343 HQAMLHHNPMSHHLKQEPSGFT 364


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -2

Query: 630  NQPQHPSAGSRGKHTTKPQHFTCPTTTTSNQ 538
            N   HP A S    +T P     P TTT+++
Sbjct: 2281 NTECHPDASSTMAPSTTPMVPDKPVTTTTSR 2311


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 560 QQPPHQTNRSWED 522
           Q PPH +N  +ED
Sbjct: 34  QMPPHYSNYHYED 46


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 463 SNHRNVDI*SFSNGLMVLCRVQYNQETRFT 374
           S  RN++  SF   L++LC +       FT
Sbjct: 268 SKSRNIEGVSFGTNLVILCALWITTLLLFT 297


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 224 YDSTSSQNKFFPG 186
           +DS S QN  FPG
Sbjct: 740 FDSRSRQNSSFPG 752


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 560 QQPPHQTNRSWED 522
           Q PPH +N  +ED
Sbjct: 34  QMPPHYSNYHYED 46


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 560 QQPPHQTNRSWED 522
           Q PPH +N  +ED
Sbjct: 34  QMPPHYSNYHYED 46


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 634 NKSTTTSQRWFTGEAHHEASTLHVPNNH 551
           N + T +Q       HH  +  HV N+H
Sbjct: 313 NNAATNNQNHHHHAGHHIHAQHHVVNHH 340


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 103 PRWVVAASILVTSSSLRASTSNPPDIV 23
           P+W  A   L  SSS + S    P IV
Sbjct: 79  PQWPFAWGSLXRSSSPQTSAPTGPPIV 105


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +2

Query: 68  CHQNACCNHPSWGRKC*LPDG 130
           CH N  C     G +C  P G
Sbjct: 269 CHNNGTCLDKVGGFECKCPPG 289


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 621 QHPSAGSRGKHTTKPQ 574
           + PS G +GK   KP+
Sbjct: 110 ERPSGGGKGKKMRKPR 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,037
Number of Sequences: 336
Number of extensions: 4496
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)