Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30556
(664 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 126 1e-29
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 31 0.96
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 0.96
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 0.96
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 0.96
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 29 2.9
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 29 2.9
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 29 2.9
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 28 5.1
AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical ... 28 5.1
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 126 bits (305), Expect = 1e-29
Identities = 56/91 (61%), Positives = 71/91 (78%)
Frame = +2
Query: 236 PR*CVRLSSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 415
P V +S+RP+ QRA+LKFAAHTGAT I GRF+PG TNQIQ F+EPRLL++ DP D
Sbjct: 71 PADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRID 130
Query: 416 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 508
HQ +TEASYV +PVI+ NT+SPL+ +DI +
Sbjct: 131 HQAVTEASYVGVPVISFVNTESPLKLIDIGV 161
Score = 108 bits (260), Expect = 3e-24
Identities = 49/76 (64%), Positives = 61/76 (80%)
Frame = +3
Query: 27 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 206
MSGG AL EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEKL+L
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 207 AARAVVAIENPADVFV 254
AARA+ A+ENPADV V
Sbjct: 61 AARAIAAVENPADVVV 76
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 272 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3127 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 272 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 272 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3025 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 272 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3026 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 272 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3108 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 272 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3127 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 272 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 272 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3025 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 272 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3026 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 272 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3108 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 272 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 272 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 272 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 433
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = +1
Query: 247 CSSLITALRSAC----CTEVCRAHRCYAYCGAFHTRCFY*PDSSCIP*TSSLDCIGPCT 411
CSS +A SAC C C+ + C C C +S C+ ++ C C+
Sbjct: 92 CSSCQSACSSACTTPTCIRTCQRNSCSNLCNTGSNSCTNRCNSQCLQICTTPSCTNTCS 150
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 333 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 485
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3338 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3388
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 333 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 485
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 333 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 485
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 333 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 485
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
Frame = -2
Query: 591 HTTKPQ--HFTCPTTTTSNQ 538
HTTKP H+T PTTTT+ +
Sbjct: 150 HTTKPYQYHYTSPTTTTTKR 169
>AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical
protein M01B12.4c protein.
Length = 678
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 579 PQHFTCPTTTTSNQ*KLGRLGV 514
P T PT+TTSN K+GRL +
Sbjct: 125 PSQTTSPTSTTSNTTKMGRLSM 146
>AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical
protein M01B12.4a protein.
Length = 634
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 579 PQHFTCPTTTTSNQ*KLGRLGV 514
P T PT+TTSN K+GRL +
Sbjct: 125 PSQTTSPTSTTSNTTKMGRLSM 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,578,093
Number of Sequences: 27780
Number of extensions: 424284
Number of successful extensions: 1161
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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