Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30555
(707 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54326-1|CAA38224.1| 1440|Homo sapiens glutaminyl-tRNA synthetas... 33 1.3
X07466-1|CAA30354.1| 792|Homo sapiens glutaminyl-tRNA synthetas... 33 1.3
BC126275-1|AAI26276.1| 1512|Homo sapiens EPRS protein protein. 33 1.3
BC105983-1|AAI05984.1| 975|Homo sapiens EPRS protein protein. 33 1.3
BC058921-1|AAH58921.1| 869|Homo sapiens EPRS protein protein. 33 1.3
BC034797-1|AAH34797.1| 970|Homo sapiens EPRS protein protein. 33 1.3
AY493416-1|AAS72877.1| 1440|Homo sapiens proliferation-inducing ... 33 1.3
L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein. 31 4.0
AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein. 31 4.0
BC111735-1|AAI11736.1| 1024|Homo sapiens HDAC9 protein protein. 30 9.3
AY197371-1|AAO27363.1| 1069|Homo sapiens histone deacetylase 9 p... 30 9.3
AK097178-1|BAC04971.1| 768|Homo sapiens protein ( Homo sapiens ... 30 9.3
>X54326-1|CAA38224.1| 1440|Homo sapiens glutaminyl-tRNA synthetase
protein.
Length = 1440
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 219 PIRQSCRCRPG-RKVEEYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPD 395
P C+ +P R +Y+ +P Y FA + DS+ G + T D + Y +++
Sbjct: 282 PTLYRCKIQPHPRTGNKYNVYPTYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWIIEAL 341
Query: 396 GTKRTVDYTADPHNGFNAVVHKEPL 470
G ++ + N N V+ K L
Sbjct: 342 GIRKPYIWEYSRLNLNNTVLSKRKL 366
>X07466-1|CAA30354.1| 792|Homo sapiens glutaminyl-tRNA synthetase
protein.
Length = 792
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 219 PIRQSCRCRPG-RKVEEYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPD 395
P C+ +P R +Y+ +P Y FA + DS+ G + T D + Y +++
Sbjct: 187 PTLYRCKIQPHPRTGNKYNVYPTYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWIIEAL 246
Query: 396 GTKRTVDYTADPHNGFNAVVHKEPL 470
G ++ + N N V+ K L
Sbjct: 247 GIRKPYIWEYSRLNLNNTVLSKRKL 271
>BC126275-1|AAI26276.1| 1512|Homo sapiens EPRS protein protein.
Length = 1512
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 219 PIRQSCRCRPG-RKVEEYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPD 395
P C+ +P R +Y+ +P Y FA + DS+ G + T D + Y +++
Sbjct: 354 PTLYRCKIQPHPRTGNKYNVYPTYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWIIEAL 413
Query: 396 GTKRTVDYTADPHNGFNAVVHKEPL 470
G ++ + N N V+ K L
Sbjct: 414 GIRKPYIWEYSRLNLNNTVLSKRKL 438
>BC105983-1|AAI05984.1| 975|Homo sapiens EPRS protein protein.
Length = 975
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 219 PIRQSCRCRPG-RKVEEYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPD 395
P C+ +P R +Y+ +P Y FA + DS+ G + T D + Y +++
Sbjct: 354 PTLYRCKIQPHPRTGNKYNVYPTYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWIIEAL 413
Query: 396 GTKRTVDYTADPHNGFNAVVHKEPL 470
G ++ + N N V+ K L
Sbjct: 414 GIRKPYIWEYSRLNLNNTVLSKRKL 438
>BC058921-1|AAH58921.1| 869|Homo sapiens EPRS protein protein.
Length = 869
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 219 PIRQSCRCRPG-RKVEEYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPD 395
P C+ +P R +Y+ +P Y FA + DS+ G + T D + Y +++
Sbjct: 354 PTLYRCKIQPHPRTGNKYNVYPTYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWIIEAL 413
Query: 396 GTKRTVDYTADPHNGFNAVVHKEPL 470
G ++ + N N V+ K L
Sbjct: 414 GIRKPYIWEYSRLNLNNTVLSKRKL 438
>BC034797-1|AAH34797.1| 970|Homo sapiens EPRS protein protein.
Length = 970
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 219 PIRQSCRCRPG-RKVEEYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPD 395
P C+ +P R +Y+ +P Y FA + DS+ G + T D + Y +++
Sbjct: 354 PTLYRCKIQPHPRTGNKYNVYPTYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWIIEAL 413
Query: 396 GTKRTVDYTADPHNGFNAVVHKEPL 470
G ++ + N N V+ K L
Sbjct: 414 GIRKPYIWEYSRLNLNNTVLSKRKL 438
>AY493416-1|AAS72877.1| 1440|Homo sapiens proliferation-inducing
protein 32 protein.
Length = 1440
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 219 PIRQSCRCRPG-RKVEEYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPD 395
P C+ +P R +Y+ +P Y FA + DS+ G + T D + Y +++
Sbjct: 282 PTLYRCKIQPHPRTGNKYNVYPTYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWIIEAL 341
Query: 396 GTKRTVDYTADPHNGFNAVVHKEPL 470
G ++ + N N V+ K L
Sbjct: 342 GIRKPYIWEYSRLNLNNTVLSKRKL 366
>L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein.
Length = 1898
Score = 31.1 bits (67), Expect = 4.0
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = -2
Query: 241 QRQLWRMGRRTLRD*RV*DEQPEQHVPREQLHMRLEQDVRCMPQEQSLLEQSQMRRPGQR 62
+ QL ++ R+ LR R +EQ +Q + REQ R +++ R QE+ +Q + + +R
Sbjct: 275 EEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEER 334
>AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein.
Length = 1943
Score = 31.1 bits (67), Expect = 4.0
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = -2
Query: 241 QRQLWRMGRRTLRD*RV*DEQPEQHVPREQLHMRLEQDVRCMPQEQSLLEQSQMRRPGQR 62
+ QL ++ R+ LR R +EQ +Q + REQ R +++ R QE+ +Q + + +R
Sbjct: 275 EEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEER 334
>BC111735-1|AAI11736.1| 1024|Homo sapiens HDAC9 protein protein.
Length = 1024
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -2
Query: 172 QHVPREQLHMRLEQDVRCMPQEQSLLEQSQ 83
QH + Q H++L+Q++ + Q+Q LLE+ Q
Sbjct: 77 QHQAQLQEHIKLQQELLAIKQQQELLEKEQ 106
>AY197371-1|AAO27363.1| 1069|Homo sapiens histone deacetylase 9
protein.
Length = 1069
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -2
Query: 172 QHVPREQLHMRLEQDVRCMPQEQSLLEQSQ 83
QH + Q H++L+Q++ + Q+Q LLE+ Q
Sbjct: 78 QHQAQLQEHIKLQQELLAIKQQQELLEKEQ 107
>AK097178-1|BAC04971.1| 768|Homo sapiens protein ( Homo sapiens
cDNA FLJ39859 fis, clone SPLEN2015094, moderately
similar to Mus musculus histone deacetylase mHDA1 mRNA.
).
Length = 768
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -2
Query: 172 QHVPREQLHMRLEQDVRCMPQEQSLLEQSQ 83
QH + Q H++L+Q++ + Q+Q LLE+ Q
Sbjct: 97 QHQAQLQEHIKLQQELLAIKQQQELLEKEQ 126
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,776,801
Number of Sequences: 237096
Number of extensions: 1325358
Number of successful extensions: 3927
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3916
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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