Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30554
         (378 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL450426-3|CAH72411.1|  317|Homo sapiens olfactory receptor, fam...    29   5.0  
AB065713-1|BAC05934.1|  317|Homo sapiens seven transmembrane hel...    29   5.0  
BX640881-1|CAE45937.1|  999|Homo sapiens hypothetical protein pr...    29   6.6  
BC110332-1|AAI10333.1|  412|Homo sapiens ZNF507 protein protein.       29   6.6  
AF038554-1|AAC02985.2|  243|Homo sapiens density regulated prote...    29   6.6  
AB065897-1|BAC06113.1|  311|Homo sapiens seven transmembrane hel...    28   8.8  

>AL450426-3|CAH72411.1|  317|Homo sapiens olfactory receptor, family
           13, subfamily C, member 3 protein.
          Length = 317

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 175 LGRGCCQLQNGFVERYHVPIYLVLSN*NFVSIC 273
           +G G   + + F   +H P+Y  L N +F+ IC
Sbjct: 40  IGNGVLIIASIFDSHFHTPMYFFLGNLSFLDIC 72


>AB065713-1|BAC05934.1|  317|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 317

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 175 LGRGCCQLQNGFVERYHVPIYLVLSN*NFVSIC 273
           +G G   + + F   +H P+Y  L N +F+ IC
Sbjct: 40  IGNGVLIIASIFDSHFHTPMYFFLGNLSFLDIC 72


>BX640881-1|CAE45937.1|  999|Homo sapiens hypothetical protein
           protein.
          Length = 999

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -3

Query: 262 QNFNYLKLNK*VHDTVLQTHFVAGSNHAPAATKMAADGCRP 140
           QN+NY ++NK ++D + Q+  V G +      K + +   P
Sbjct: 858 QNYNYEQVNKAINDAISQSGRVLGKSPGKTQLKSSEESADP 898


>BC110332-1|AAI10333.1|  412|Homo sapiens ZNF507 protein protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -3

Query: 262 QNFNYLKLNK*VHDTVLQTHFVAGSNHAPAATKMAADGCRP 140
           QN+NY ++NK ++D + Q+  V G +      K + +   P
Sbjct: 271 QNYNYEQVNKAINDAISQSGRVLGKSPGKTQLKSSEESADP 311


>AF038554-1|AAC02985.2|  243|Homo sapiens density regulated protein
           drp1 protein.
          Length = 243

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +2

Query: 131 VSRGSASVGRHLGRRWG 181
           +SRGSA+ GR LGR WG
Sbjct: 1   LSRGSAAGGRALGRPWG 17


>AB065897-1|BAC06113.1|  311|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 311

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +1

Query: 214 ERYHVPIYLVLSN*NFVSIC 273
           +R H P+Y++L+N +F+ IC
Sbjct: 57  QRLHAPMYILLANFSFLEIC 76


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,546,282
Number of Sequences: 237096
Number of extensions: 959813
Number of successful extensions: 2291
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2291
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)