Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30553
(741 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryo... 164 2e-39
UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=... 152 1e-35
UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein... 149 7e-35
UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S riboso... 145 1e-33
UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukar... 133 5e-30
UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; E... 122 7e-27
UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S riboso... 109 9e-23
UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing ... 107 2e-22
UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n... 107 3e-22
UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillard... 101 2e-20
UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryot... 90 6e-17
UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephal... 81 3e-14
UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobact... 65 1e-09
UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1; Methano... 63 6e-09
UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1; Th... 63 8e-09
UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4; Pyrobac... 63 8e-09
UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfu... 60 7e-08
UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga ... 59 1e-07
UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_030011... 58 2e-07
UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12; Euryar... 56 1e-06
UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3; Me... 55 2e-06
UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermop... 54 3e-06
UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2; Euryarc... 54 4e-06
UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5; Sulfolo... 54 5e-06
UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4; Euryarc... 52 2e-05
UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1; Nanoarc... 49 1e-04
UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n... 48 2e-04
UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1; Me... 48 2e-04
UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2; Bigelowi... 48 2e-04
UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1; Picroph... 48 3e-04
UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmenta... 45 0.002
UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1; Methanococc... 45 0.002
UniRef50_UPI0000D9BECC Cluster: PREDICTED: hypothetical protein;... 41 0.037
UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108, w... 40 0.085
UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6; Halobac... 39 0.11
UniRef50_A4HWV4 Cluster: Histone h3; n=2; Leishmania|Rep: Histon... 38 0.20
UniRef50_A2VZS4 Cluster: 2-methylcitrate dehydratase; n=1; Burkh... 37 0.45
UniRef50_Q5D9J3 Cluster: SJCHGC00596 protein; n=1; Schistosoma j... 37 0.60
UniRef50_Q4S9B3 Cluster: Chromosome undetermined SCAF14699, whol... 36 1.0
UniRef50_A0TQD3 Cluster: Putative uncharacterized protein; n=4; ... 36 1.0
UniRef50_A4R522 Cluster: Putative uncharacterized protein; n=2; ... 36 1.0
UniRef50_UPI0000EB020D Cluster: UPI0000EB020D related cluster; n... 36 1.4
UniRef50_A7RGY6 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.4
UniRef50_Q9D5Q4 Cluster: Adult male testis cDNA, RIKEN full-leng... 35 2.4
UniRef50_Q6AL56 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2; Thermoprote... 35 2.4
UniRef50_Q9H7Y0 Cluster: Uncharacterized protein CXorf36 precurs... 35 2.4
UniRef50_UPI0000E80C82 Cluster: PREDICTED: hypothetical protein;... 34 3.2
UniRef50_UPI00005A603F Cluster: PREDICTED: hypothetical protein ... 34 3.2
UniRef50_UPI00005A516D Cluster: PREDICTED: hypothetical protein ... 34 3.2
UniRef50_Q62DE6 Cluster: Putative uncharacterized protein; n=15;... 34 3.2
UniRef50_Q1B190 Cluster: 5-oxoprolinase; n=2; Mycobacterium|Rep:... 34 3.2
UniRef50_Q0IRJ8 Cluster: Os11g0623700 protein; n=2; Oryza sativa... 34 3.2
UniRef50_O62543 Cluster: Serum response factor; n=1; Geodia cydo... 34 3.2
UniRef50_Q9P557 Cluster: Related to merozoite surface antigen 2;... 34 3.2
UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_030005... 34 4.2
UniRef50_A1UQD5 Cluster: Putative uncharacterized protein; n=2; ... 34 4.2
UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_UPI0000EBD246 Cluster: PREDICTED: hypothetical protein;... 33 5.6
UniRef50_UPI000045C0C9 Cluster: hypothetical protein Npun0200749... 33 5.6
UniRef50_A4H4L8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_A7F9K5 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_UPI0000E21FCD Cluster: PREDICTED: hypothetical protein;... 33 7.4
UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to Tyrosine-p... 33 7.4
UniRef50_Q0S5H2 Cluster: Undecaprenyl-phosphate galactose phosph... 33 7.4
UniRef50_A5P2Y6 Cluster: Putative uncharacterized protein; n=4; ... 33 7.4
UniRef50_A0YER0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_Q6Z321 Cluster: Epstein-Barr virus EBNA-1-like; n=2; Or... 33 7.4
UniRef50_Q3ECN0 Cluster: Uncharacterized protein At1g56530.1; n=... 33 7.4
UniRef50_A5YVK6 Cluster: Regulator of chromosome condensation 1;... 33 7.4
UniRef50_A6QU28 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 7.4
UniRef50_UPI0000E2508C Cluster: PREDICTED: hypothetical protein;... 33 9.7
UniRef50_UPI0000DD8626 Cluster: PREDICTED: hypothetical protein;... 33 9.7
UniRef50_UPI000059FE9C Cluster: PREDICTED: hypothetical protein ... 33 9.7
UniRef50_Q82NB4 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_Q46YP4 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_Q1YI78 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_Q11ER6 Cluster: Putative uncharacterized protein precur... 33 9.7
UniRef50_A6G3J3 Cluster: Site-specific recombinase, phage integr... 33 9.7
UniRef50_A0V7H4 Cluster: ABC-type nitrate/sulfonate/bicarbonate ... 33 9.7
UniRef50_Q4DW65 Cluster: Ubiquitin-protein ligase, putative; n=2... 33 9.7
UniRef50_Q9Y8V1 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
>UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38;
Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila
melanogaster (Fruit fly)
Length = 261
Score = 164 bits (398), Expect = 2e-39
Identities = 75/111 (67%), Positives = 85/111 (76%)
Frame = +3
Query: 255 PYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIV 434
P+LVTHDGRTIRYPDPLI NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT+V
Sbjct: 137 PFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVV 196
Query: 435 SRERHPGSFDIVHIKDSTGHTFXXXXXXXXXXXXXXXXYISLPRGQRASAS 587
+RERHPGSFDIVHIKDS GH F YISLP+G+ S
Sbjct: 197 NRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLS 247
Score = 141 bits (341), Expect = 2e-32
Identities = 64/85 (75%), Positives = 72/85 (84%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LKYAL G EV KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF I
Sbjct: 52 LKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVI 111
Query: 181 HRITPEEAKYKLCKVKRVATGPKNV 255
HRI+ EEAKYKLCKVK+ G K V
Sbjct: 112 HRISAEEAKYKLCKVKKTQLGAKGV 136
Score = 41.5 bits (93), Expect = 0.021
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +2
Query: 509 LNNVFIIGKGTKGVHLAAARAKGIRLTIAEERDQ 610
L NVFIIGKG K +++ + KG++L+IAEERD+
Sbjct: 222 LTNVFIIGKGNKP-YISLPKGKGVKLSIAEERDK 254
>UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform;
n=137; Eukaryota|Rep: 40S ribosomal protein S4, X
isoform - Homo sapiens (Human)
Length = 263
Score = 152 bits (368), Expect = 1e-35
Identities = 66/106 (62%), Positives = 82/106 (77%)
Frame = +3
Query: 255 PYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIV 434
P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G I
Sbjct: 137 PHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVIT 196
Query: 435 SRERHPGSFDIVHIKDSTGHTFXXXXXXXXXXXXXXXXYISLPRGQ 572
+RERHPGSFD+VH+KD+ G++F +ISLPRG+
Sbjct: 197 NRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGK 242
Score = 140 bits (338), Expect = 4e-32
Identities = 63/85 (74%), Positives = 72/85 (84%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +
Sbjct: 52 LKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAV 111
Query: 181 HRITPEEAKYKLCKVKRVATGPKNV 255
HRITPEEAKYKLCKV+++ G K +
Sbjct: 112 HRITPEEAKYKLCKVRKIFVGTKGI 136
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = +2
Query: 485 HGTHLRHELNNVFIIGKGTKGVHLAAARAKGIRLTIAEERDQ 610
+G L+N+F+IGKG K ++ R KGIRLTIAEERD+
Sbjct: 214 NGNSFATRLSNIFVIGKGNKP-WISLPRGKGIRLTIAEERDK 254
>UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein
S4, X isoform (LOC126235), mRNA; n=1; Takifugu
rubripes|Rep: similar to 40S ribosomal protein S4, X
isoform (LOC126235), mRNA - Takifugu rubripes
Length = 291
Score = 149 bits (361), Expect = 7e-35
Identities = 63/106 (59%), Positives = 82/106 (77%)
Frame = +3
Query: 255 PYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIV 434
P+LVTHD RTIRYPDPLIKVND++++D+ T KI DFIKF++ N+CM+TGG NLGR+G I
Sbjct: 169 PHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTSNMCMVTGGANLGRIGVIT 228
Query: 435 SRERHPGSFDIVHIKDSTGHTFXXXXXXXXXXXXXXXXYISLPRGQ 572
+RERHPGSFD+VH+KDSTG++F ++SLPRG+
Sbjct: 229 NRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGK 274
Score = 118 bits (283), Expect(2) = 4e-27
Identities = 55/69 (79%), Positives = 60/69 (86%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LKYALTG+EV KI QR IK+DGKVRTD TYP GFMDV+SI+KT E FRLIYDVKGRFT+
Sbjct: 52 LKYALTGDEVKKICMQRFIKIDGKVRTDITYPTGFMDVISIDKTGEHFRLIYDVKGRFTV 111
Query: 181 HRITPEEAK 207
HRIT EEAK
Sbjct: 112 HRITAEEAK 120
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +2
Query: 488 GTHLRHELNNVFIIGKGTKGVHLAAARAKGIRLTIAEERDQ 610
G L+N+F+IGKG K ++ R KGIRLTIAEERD+
Sbjct: 247 GNSFATRLSNIFVIGKGNKP-WVSLPRGKGIRLTIAEERDK 286
Score = 26.6 bits (56), Expect(2) = 4e-27
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 205 KYKLCKVKRVATGPKNV 255
+YKLCKVK++ G K +
Sbjct: 152 QYKLCKVKKILIGTKGI 168
>UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=3; Eutheria|Rep: PREDICTED:
similar to 40S ribosomal protein S4, X isoform - Canis
familiaris
Length = 240
Score = 145 bits (351), Expect = 1e-33
Identities = 62/106 (58%), Positives = 79/106 (74%)
Frame = +3
Query: 255 PYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIV 434
P+LVTHD RTIRYPDPLIK+ND+IQ+D+ T KI DF KF++GNLCM+TGG NLGR+G I
Sbjct: 109 PHLVTHDARTIRYPDPLIKMNDTIQIDLETGKITDFFKFDTGNLCMVTGGTNLGRIGVIT 168
Query: 435 SRERHPGSFDIVHIKDSTGHTFXXXXXXXXXXXXXXXXYISLPRGQ 572
+RE HPGSFD+VH+KD+ G++F +ISLP G+
Sbjct: 169 NRENHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNIPWISLPHGK 214
Score = 52.0 bits (119), Expect(2) = 2e-10
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +1
Query: 157 DVKGRFTIHRITPEEAKYKLCKVKRVATGPKNV 255
D KGRF +HRITPEEAKYKL KV+++ G K +
Sbjct: 76 DTKGRFAVHRITPEEAKYKLGKVRKIFVGTKGI 108
Score = 36.3 bits (80), Expect(2) = 2e-10
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGK 72
LKYALTG+EV KI Q IK+DGK
Sbjct: 52 LKYALTGDEVKKIRMQHFIKMDGK 75
Score = 34.3 bits (75), Expect = 3.2
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 485 HGTHLRHELNNVFIIGKGTKGVHLAAARAKGIRLTIAEER 604
+G L+N+F+IGKG ++ KGIR TIAEE+
Sbjct: 186 NGNSFATRLSNIFVIGKGNIP-WISLPHGKGIRFTIAEEK 224
>UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55;
Eukaryota|Rep: 40S ribosomal protein S4-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 262
Score = 133 bits (321), Expect = 5e-30
Identities = 59/106 (55%), Positives = 77/106 (72%)
Frame = +3
Query: 255 PYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIV 434
PYL T+DGRTIRYPDPLIK ND+I+LD+ KI++FIKF+ GN+ M+TGGRN GRVG I
Sbjct: 137 PYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIK 196
Query: 435 SRERHPGSFDIVHIKDSTGHTFXXXXXXXXXXXXXXXXYISLPRGQ 572
+RE+H GSF+ +HI+DSTGH F ++SLP+G+
Sbjct: 197 NREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGK 242
Score = 123 bits (297), Expect = 4e-27
Identities = 58/85 (68%), Positives = 67/85 (78%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LKYALT EV+ I+ QR I+VDGKVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +
Sbjct: 52 LKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRL 111
Query: 181 HRITPEEAKYKLCKVKRVATGPKNV 255
H I EEAK+KLCKV+ + G K +
Sbjct: 112 HSIKDEEAKFKLCKVRSIQFGQKGI 136
Score = 33.9 bits (74), Expect = 4.2
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 488 GTHLRHELNNVFIIGKGTKGVHLAAARAKGIRLTIAEE 601
G L NV+ IGKGTK ++ + KGI+LTI EE
Sbjct: 215 GHEFATRLGNVYTIGKGTKP-WVSLPKGKGIKLTIIEE 251
>UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S4 - Entamoeba histolytica HM-1:IMSS
Length = 326
Score = 122 bits (295), Expect = 7e-27
Identities = 52/82 (63%), Positives = 67/82 (81%)
Frame = +3
Query: 255 PYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIV 434
PY+VTHDGRTIRYP P ++ ND+I+L++ T KI+DF+KF+ GN M+ GG +GRVG IV
Sbjct: 137 PYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVGVIV 196
Query: 435 SRERHPGSFDIVHIKDSTGHTF 500
RE HPGSF+IVHIKD+ G+TF
Sbjct: 197 KREVHPGSFEIVHIKDAKGNTF 218
Score = 101 bits (243), Expect = 1e-20
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
L YAL G EV IVK R IK+DGK+RTD YP GFMDV+SI +T E FRL+Y+ K RF +
Sbjct: 52 LNYALNGREVTMIVKNRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCL 111
Query: 181 HRITPEEAKYKLCKVKRVATG 243
+T E+AK+KLCK+++ G
Sbjct: 112 VPLTAEQAKFKLCKIEKRVLG 132
>UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=1; Macaca mulatta|Rep:
PREDICTED: similar to 40S ribosomal protein S4, X
isoform - Macaca mulatta
Length = 244
Score = 109 bits (261), Expect = 9e-23
Identities = 47/82 (57%), Positives = 64/82 (78%)
Frame = +3
Query: 255 PYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIV 434
P+LV HD T+R+PD LIKVND+IQ+D+ T KI +KF++GNLC++TGG N GR+G I
Sbjct: 147 PHLVIHDIHTVRHPDSLIKVNDTIQIDLETGKITA-LKFDTGNLCLVTGGGNWGRIGVIT 205
Query: 435 SRERHPGSFDIVHIKDSTGHTF 500
+RERHP SFD H+KD+ ++F
Sbjct: 206 NRERHPVSFDTFHVKDANSNSF 227
Score = 104 bits (250), Expect = 2e-21
Identities = 49/85 (57%), Positives = 60/85 (70%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LKYALTG+EV KI Q IKVDGK+RTD P MDV+SI+K E F LIY + RF +
Sbjct: 62 LKYALTGDEVKKICMQWFIKVDGKIRTDNNLPYWIMDVISIDKMGEDFCLIYGINRRFAL 121
Query: 181 HRITPEEAKYKLCKVKRVATGPKNV 255
HRITPEE KYKLCK++++ K +
Sbjct: 122 HRITPEEVKYKLCKMRKIFVRAKGI 146
>UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal family S4e containing protein - Tetrahymena
thermophila SB210
Length = 370
Score = 107 bits (258), Expect = 2e-22
Identities = 48/107 (44%), Positives = 65/107 (60%)
Frame = +3
Query: 249 ECPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 428
+ PY+VTHD RTIR+P+P IK+ D+++ D+ KI +F ESGN+C I G N+GRVG
Sbjct: 247 QIPYIVTHDSRTIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVGI 306
Query: 429 IVSRERHPGSFDIVHIKDSTGHTFXXXXXXXXXXXXXXXXYISLPRG 569
I E+H GSFDI H+KD+ G+ F +I LP G
Sbjct: 307 IQHIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGKKSWIELPSG 353
Score = 94.7 bits (225), Expect = 2e-18
Identities = 46/87 (52%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 LKYALTGNEVLKIV--KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRF 174
L YAL G +V I+ K++ + VDGKVR D YP G MDVV IEKT++ FR++YD KGRF
Sbjct: 162 LNYALNGRDVTLILNDKEQNVFVDGKVRRDKGYPTGLMDVVRIEKTDQSFRILYDTKGRF 221
Query: 175 TIHRITPEEAKYKLCKVKRVATGPKNV 255
+ ++ EEAKYKL KV A GP +
Sbjct: 222 VLKSLSKEEAKYKLLKVTAKAIGPNQI 248
>UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n=4;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein
S4-C, putative - Trichomonas vaginalis G3
Length = 269
Score = 107 bits (257), Expect = 3e-22
Identities = 48/85 (56%), Positives = 62/85 (72%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LKYALT E + IVK+RL+KVDGKVRT+ YP G MDV+ + K+NELFR+IYD KGRF +
Sbjct: 66 LKYALTAKEAVAIVKRRLVKVDGKVRTNYRYPTGLMDVIELGKSNELFRIIYDCKGRFCV 125
Query: 181 HRITPEEAKYKLCKVKRVATGPKNV 255
H I +EA +KL +V + G K +
Sbjct: 126 HHIEAKEASFKLLRVNQFKIGAKGI 150
Score = 99.5 bits (237), Expect = 7e-20
Identities = 50/120 (41%), Positives = 71/120 (59%)
Frame = +3
Query: 255 PYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIV 434
P++VTHDGRTI Y DP ++V+D+++ +I T ++ IKF+ G++ M+T G N+GRVGTI
Sbjct: 151 PHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDVAMVTAGGNVGRVGTIQ 210
Query: 435 SRERHPGSFDIVHIKDSTGHTFXXXXXXXXXXXXXXXXYISLPRGQRASASPSPRNGIKR 614
E+ SFDIVH+KD++G F ISLP R PS GI +
Sbjct: 211 KIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLP--AREGVRPSILEGINQ 268
>UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillardia
theta|Rep: 40S ribosomal protein S4 - Guillardia theta
(Cryptomonas phi)
Length = 257
Score = 101 bits (241), Expect = 2e-20
Identities = 48/104 (46%), Positives = 64/104 (61%)
Frame = +3
Query: 255 PYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIV 434
PY+VTHDGRTIR+P+ LIK NDSI LD+ K++DFIKF G+LC++ G N+GR+G +
Sbjct: 137 PYIVTHDGRTIRFPNLLIKSNDSIVLDLLNNKVIDFIKFSIGSLCVVIKGSNIGRIGVFI 196
Query: 435 SRERHPGSFDIVHIKDSTGHTFXXXXXXXXXXXXXXXXYISLPR 566
+ GS IV +KD G +F +ISLPR
Sbjct: 197 NTIGGQGSDSIVCLKDFNGSSFSTQTKNLFVIGKGTKSFISLPR 240
Score = 93.9 bits (223), Expect = 4e-18
Identities = 44/85 (51%), Positives = 59/85 (69%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LKY+ E L I+K+ I VDGKVR D +PAG MDV+SI+ T E +R++YD G F +
Sbjct: 52 LKYSTNQRESLNILKKNEIYVDGKVRADKNFPAGVMDVISIKTTKENYRVLYDNVGHFFL 111
Query: 181 HRITPEEAKYKLCKVKRVATGPKNV 255
HRIT +E+ +KLCKV RV+ G K +
Sbjct: 112 HRITIKESMFKLCKVIRVSIGSKGI 136
>UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9;
Eukaryota|Rep: 40S ribosomal protein S4 - Leishmania
major
Length = 273
Score = 89.8 bits (213), Expect = 6e-17
Identities = 39/82 (47%), Positives = 52/82 (63%)
Frame = +3
Query: 255 PYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIV 434
P VTHDG IRYPDP + D+I ++ K +D IK G ++TGG N GR+G IV
Sbjct: 134 PVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANRGRIGEIV 193
Query: 435 SRERHPGSFDIVHIKDSTGHTF 500
E HPG+F+I H+KD++G F
Sbjct: 194 KVECHPGAFNIAHLKDASGAEF 215
Score = 83.8 bits (198), Expect = 4e-15
Identities = 43/85 (50%), Positives = 53/85 (62%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LKYAL E I++Q L+ VD R D YPAGFMDVV I KT + FRL+YDVKGRF +
Sbjct: 49 LKYALNAREGEMILRQGLVHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFAL 108
Query: 181 HRITPEEAKYKLCKVKRVATGPKNV 255
++ EA+ KL KV + T V
Sbjct: 109 VNLSEAEAQIKLMKVVNLYTATGRV 133
>UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S4 -
Encephalitozoon cuniculi
Length = 268
Score = 81.0 bits (191), Expect = 3e-14
Identities = 38/77 (49%), Positives = 55/77 (71%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
L+YA E+ I+ ++ IKV+G+VRT+ +P G DVVSIEKT E FR++Y+V +F +
Sbjct: 52 LRYASNFKELSIILAEKNIKVNGRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHL 111
Query: 181 HRITPEEAKYKLCKVKR 231
HRI+ EEA Y+L KV +
Sbjct: 112 HRISSEEASYRLTKVTK 128
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/82 (28%), Positives = 46/82 (56%)
Frame = +3
Query: 255 PYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIV 434
PY+V+ G +IR+ DP I + +I++ T+K++++I + ++ G+ GRVG ++
Sbjct: 136 PYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYIVPGPDKVIFVSRGKARGRVG-VI 194
Query: 435 SRERHPGSFDIVHIKDSTGHTF 500
+ G + + D G+TF
Sbjct: 195 NTISTQGKETVYGMTDFAGNTF 216
>UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2;
Methanobacteriaceae|Rep: Ribosomal protein S4e -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 242
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/80 (40%), Positives = 48/80 (60%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LK A E +I+ + VDG+V D +P GFMD++ I KT E++R++ D KGR +
Sbjct: 53 LKLADNSREAKRIINSGNVLVDGRVIKDYKFPVGFMDIIEIPKTGEVYRVLLDKKGRLQL 112
Query: 181 HRITPEEAKYKLCKVKRVAT 240
++I EE KLCK+ +T
Sbjct: 113 NKI--EENDSKLCKIVNKST 130
Score = 37.5 bits (83), Expect = 0.34
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +3
Query: 270 HDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTI 431
HDG+ + + V D I L + +I + + + G +ITGG++ G +GT+
Sbjct: 141 HDGKNVIIDENDYNVGDVIDLKVPDHEINEVFELKEGACVLITGGKHTGELGTV 194
>UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S4e -
Methanopyrus kandleri
Length = 260
Score = 63.3 bits (147), Expect = 6e-09
Identities = 30/76 (39%), Positives = 46/76 (60%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
L YA E KI+ + I VDG VR +P +P G MDVV I +T + +R++ + R +
Sbjct: 56 LGYADYAREARKIITRGEIYVDGVVRKEPKFPVGIMDVVEIPRTGDRYRVVMNEHHRLDV 115
Query: 181 HRITPEEAKYKLCKVK 228
I+ EEA+ K+C++K
Sbjct: 116 VPISEEEARVKVCRIK 131
>UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1;
Thermofilum pendens Hrk 5|Rep: Ribosomal protein S4E,
central - Thermofilum pendens (strain Hrk 5)
Length = 251
Score = 62.9 bits (146), Expect = 8e-09
Identities = 31/78 (39%), Positives = 46/78 (58%)
Frame = +1
Query: 7 YALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHR 186
YA T E +I+ R+I+VDG+V TD +P G MDV+ I + +R++ D +
Sbjct: 57 YAKTMKEARRILASRVIEVDGRVVTDYKFPVGLMDVLHIIPEEKYYRVVPDPARKLRFVE 116
Query: 187 ITPEEAKYKLCKVKRVAT 240
I PEEA YKL +++R T
Sbjct: 117 IKPEEAGYKLAQIRRKMT 134
>UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S4e - Pyrobaculum
aerophilum
Length = 238
Score = 62.9 bits (146), Expect = 8e-09
Identities = 31/76 (40%), Positives = 46/76 (60%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LKYA T +E I+ + +KVDG VR D +P G MDV+ I T E++R++ D + +
Sbjct: 48 LKYAKTMHEARYIISRGYVKVDGVVRRDYKFPVGLMDVIEIVPTGEVYRVVPDADKYYNL 107
Query: 181 HRITPEEAKYKLCKVK 228
I+ EEA KL +V+
Sbjct: 108 LPISTEEAALKLLRVE 123
>UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4;
Desulfurococcales|Rep: 30S ribosomal protein S4e -
Aeropyrum pernix
Length = 253
Score = 59.7 bits (138), Expect = 7e-08
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLI-YDVKGRFT 177
L YA T E K++ + +VDG VR D +P GFMDV+ + T E FR++ Y VK F
Sbjct: 53 LGYAQTAREARKLISEGHFRVDGVVRKDYKFPVGFMDVIEVVDTGEKFRMLPYPVK-FFK 111
Query: 178 IHRITPEEAKYKLCKVKRVAT 240
+H I EE K +++ T
Sbjct: 112 LHPIPEEEGDLKPVRIENKTT 132
Score = 47.2 bits (107), Expect = 4e-04
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Frame = +3
Query: 270 HDGRTI--RYPDP------LIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 425
HDGR I R DP + + D++ + + +I IKF G + +I GGRN+GRVG
Sbjct: 143 HDGRNILVRVKDPRNPVEDVYRTMDTLLITVPGQEIKGHIKFGEGAIAIIVGGRNVGRVG 202
Query: 426 TIVSRERHPG-SFDIVHIKDSTGHTF 500
+ S ++ G +V ++D++G+ F
Sbjct: 203 VVKSVQKGWGRKRTLVTLEDASGNLF 228
>UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S4E -
Caldivirga maquilingensis IC-167
Length = 237
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/74 (40%), Positives = 41/74 (55%)
Frame = +1
Query: 7 YALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHR 186
YA T E I+ + +KVDGKVR D YP G MDV+ + NE +R+I D R
Sbjct: 49 YAKTLREARLIIGKGYVKVDGKVRRDYKYPVGLMDVIELTPINEYYRIIPDPVNFLRPIR 108
Query: 187 ITPEEAKYKLCKVK 228
I EA K+C+++
Sbjct: 109 IDKSEAGVKVCRIE 122
>UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_03001139;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001139 - Ferroplasma acidarmanus fer1
Length = 241
Score = 58.4 bits (135), Expect = 2e-07
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LK E+ +I+ ++KVDG++ D +P GFMDV+SI+ + ++YD KG+ I
Sbjct: 49 LKLGDKEREITRILNNNMVKVDGRIVKDRRFPVGFMDVLSIDTLENDYIIVYDRKGKLVI 108
Query: 181 HRITPEEAKYKLCK-VKRVATGPKNVR 258
+ P KL K VK+ G ++
Sbjct: 109 RQNAPGNKGLKLFKVVKKTIIGTGKIQ 135
Score = 37.9 bits (84), Expect = 0.26
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 270 HDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRE 443
HDG+TI I +D + + I +I + +K G+ ITGG ++G + TI S E
Sbjct: 139 HDGKTIVTDRKDINTSDVLLMKIPDLEIENVLKIAEGDKVFITGGSHVGELATIKSIE 196
>UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanococcus maripaludis
Length = 244
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/75 (36%), Positives = 45/75 (60%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LKYA E KI++ I +DG R + +PAG MDV+SI + +E + +++D GR ++
Sbjct: 53 LKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDETYLVLFDESGRISL 112
Query: 181 HRITPEEAKYKLCKV 225
+ ++ KLCK+
Sbjct: 113 KK--TDKTDVKLCKI 125
Score = 41.1 bits (92), Expect = 0.028
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +3
Query: 297 DPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHI 476
+ + K DS+ + I I + F G L ITGG+++G IV E DIV +
Sbjct: 158 EDVYKTGDSVLISIPEQSIAGHVAFGEGKLAYITGGKHVGEFAKIVEVENRALYSDIVTL 217
Query: 477 KDSTGHTF 500
++ G F
Sbjct: 218 ENKDGEKF 225
>UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3;
Methanomicrobiales|Rep: Ribosomal protein S4E, central -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 242
Score = 55.2 bits (127), Expect = 2e-06
Identities = 29/77 (37%), Positives = 41/77 (53%)
Frame = +1
Query: 10 ALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRI 189
A +EV KI+ QR + V+G+ D G D+VSI K + +R+ DVKG I
Sbjct: 50 AQNASEVKKILHQRDVLVNGRACKDSRMGLGVFDIVSIPKLGKHYRIQLDVKGNLVAIEI 109
Query: 190 TPEEAKYKLCKVKRVAT 240
E AK +LCK++ T
Sbjct: 110 PAESAKTRLCKIRNKTT 126
Score = 38.3 bits (85), Expect = 0.20
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Frame = +3
Query: 297 DPLIKVNDSIQLDIATT-----KIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSF 461
D K DS+ + + T +I+D + GN+ MI GG++ G+VG IV R S
Sbjct: 145 DNTYKAKDSVVVTLGTDGEDRFRIVDHFPYAEGNVAMIVGGKHSGKVGRIVEIIRTASSV 204
Query: 462 --DIVHIKDSTGHTF 500
++ DS G F
Sbjct: 205 PNHVILTDDSAGERF 219
>UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3;
Thermoplasma|Rep: 30S ribosomal protein S4e -
Thermoplasma acidophilum
Length = 235
Score = 54.4 bits (125), Expect = 3e-06
Identities = 29/84 (34%), Positives = 44/84 (52%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LK + E +I+ L+KVDGK + + GFMDV+ I E +R++Y+ +G +
Sbjct: 48 LKLSDKEREAARILANGLVKVDGKTVREKKFAVGFMDVIEI--NGESYRVVYNDQGALVL 105
Query: 181 HRITPEEAKYKLCKVKRVATGPKN 252
+ T E A KL KV+ P N
Sbjct: 106 MKETKERASMKLLKVRSKVIAPGN 129
Score = 49.6 bits (113), Expect = 8e-05
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 261 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSR 440
L THDGRT D KV D + + KI + IK + GN IT G ++ + GTI
Sbjct: 133 LGTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHVNQTGTISKI 192
Query: 441 ERHPG-SFDIVHIKD 482
E G S ++VH ++
Sbjct: 193 EAKEGSSANLVHFQE 207
>UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S4E -
Uncultured methanogenic archaeon RC-I
Length = 234
Score = 54.0 bits (124), Expect = 4e-06
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LK A +E+ KI+ + + VDGKVR D Y G D +SI N +R++ + G+F
Sbjct: 49 LKVADNTSEIKKILHEGKVLVDGKVRKDYRYTVGMFDTISIPAINANYRVVIGMDGKF-- 106
Query: 181 HRITPEEAKYKLCKV 225
H + +A K+CK+
Sbjct: 107 HLVPVTDASAKICKI 121
Score = 33.1 bits (72), Expect = 7.4
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 270 HDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTI 431
HDG T+ + K DS+ L + KI + G+L M+T G++ G +G +
Sbjct: 137 HDGTTMIASNDY-KTKDSVILKMPERKIDQHFTYAVGSLVMVTEGKHSGEIGKV 189
>UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S4e -
Sulfolobus acidocaldarius
Length = 244
Score = 53.6 bits (123), Expect = 5e-06
Identities = 31/80 (38%), Positives = 40/80 (50%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LK T E +I+ + VDGKVR D YP G MDVV I + R+I D T
Sbjct: 47 LKAVDTTREAKRIIFDGKVLVDGKVRRDYKYPVGLMDVVEIPSADLRVRIIPDNVRYLTT 106
Query: 181 HRITPEEAKYKLCKVKRVAT 240
I+ E+AKYK ++ T
Sbjct: 107 INISREDAKYKFVRIMNKTT 126
>UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 235
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LK E +I+ + + VDG R D +P G DV+++ NE +R++ D KGR +
Sbjct: 47 LKLVDNNREGKRILSEGKVLVDGISRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLVL 106
Query: 181 HRITPEEAKYKLCKVKRVAT 240
+++ E KLC++ T
Sbjct: 107 YKLN-ETNVNKLCRINNKTT 125
Score = 37.9 bits (84), Expect = 0.26
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 318 DSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVS-RERHPGSFDIVHIKDST 488
DS+ L I ++ +KFE GNL M+ GG++ G G I+ RE + V I T
Sbjct: 151 DSLILSIPDKHVVKHLKFEVGNLAMVIGGQHSGETGKIMEIREVKSSRHNTVMISGET 208
>UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S4e -
Nanoarchaeum equitans
Length = 234
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/69 (33%), Positives = 39/69 (56%)
Frame = +1
Query: 25 EVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEA 204
EV ++ + VDG+ D +P G DV++I + NE +R++ D +G+ + +I EEA
Sbjct: 61 EVRYLLNNGKVLVDGRPIKDYKFPVGLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEA 120
Query: 205 KYKLCKVKR 231
K K+ R
Sbjct: 121 NIKYGKIIR 129
>UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 197
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = -2
Query: 485 GVLDVHNVEGAGMSLAGHDGAHTPQVTASRDHTQVPGLKLDEVHNLRSCNV*LDGIVDFD 306
GVL VHN EG + LA D V + DH Q ++LD + +L +V +G+ D
Sbjct: 68 GVLQVHNFEGTDVLLAALDHPDATGVVTTGDHAQSADVELDRIGDLVRRDVDHNGVTLLD 127
Query: 305 KWVWIADGAAIMRYQVRTFLGP 240
+ + +GAA+++ R L P
Sbjct: 128 HGIRVTNGAAVVQTDARHALVP 149
>UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S4E, central - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 239
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
+++AL EV KI+ R + ++G + TD D++S K ++ + ++ D KGR
Sbjct: 46 MQFALNTKEVRKILHDRQVLLNGHIVTDEHIGIDVFDIISFPKIDKHYMILVDEKGRHNE 105
Query: 181 HRITPEEAKYKLCKVKRVAT 240
+ I+ + AK +L KV T
Sbjct: 106 YEISADAAKLQLVKVANKTT 125
>UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2;
Bigelowiella natans|Rep: 40S ribosomal protein S4 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 242
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +1
Query: 25 EVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEA 204
E K+VK + V+GK +P MD +S N+ +R++ G+ T++ I E
Sbjct: 60 EAQKVVKTGFLYVNGKKCLSHKFPISLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEK 119
Query: 205 KYKLCKVKRV 234
K+CKV ++
Sbjct: 120 DLKICKVIKI 129
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/77 (29%), Positives = 42/77 (54%)
Frame = +3
Query: 261 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSR 440
++T D R ++ IKV DS+ + +I+ +KFE G+LC+IT G++LG + I
Sbjct: 139 IITDDLRELKINYAKIKVEDSLLIKTINDEIVYALKFEVGSLCLITRGKHLGTIAVIKEI 198
Query: 441 ERHPGSFDIVHIKDSTG 491
+ ++H++ G
Sbjct: 199 RKTKSLRKMIHLEKIDG 215
>UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1;
Picrophilus torridus|Rep: 30S ribosomal protein S4e -
Picrophilus torridus
Length = 234
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +3
Query: 270 HDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRE-R 446
HDG T+ IK DS+ + I +I+D +KF GN ITGG ++G + TI S E +
Sbjct: 136 HDGSTMVTDRKDIKNGDSVLVKIPKKEIVDVLKFAPGNRVFITGGSHVGEIATIKSIEIK 195
Query: 447 HPGSFDIVHIKD 482
++VH+ +
Sbjct: 196 SSSGENMVHMNE 207
Score = 37.9 bits (84), Expect = 0.26
Identities = 25/76 (32%), Positives = 37/76 (48%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LK E+ +I+ L+ VDGKV + GFMD +++ + L + YD KG+ I
Sbjct: 48 LKLGDKEREITRILTNSLVMVDGKVVKERRRGIGFMDTLTVSGNDYL--VSYDRKGKLVI 105
Query: 181 HRITPEEAKYKLCKVK 228
E KL +VK
Sbjct: 106 LPKPGETKGLKLLRVK 121
>UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmental
samples|Rep: Ribosomal protein S4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 232
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/72 (33%), Positives = 40/72 (55%)
Frame = +1
Query: 25 EVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEA 204
E +++ R + VDG++ TD G MDV+++ + + FR I DV G+ I+ + A
Sbjct: 57 EAKRMLATRQVLVDGRIETDLGRGVGLMDVLTVGE--DSFRCILDVNGKLRYRSISDKAA 114
Query: 205 KYKLCKVKRVAT 240
KLC+V +T
Sbjct: 115 ASKLCRVMGKST 126
Score = 33.1 bits (72), Expect = 7.4
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 270 HDGRTIRYPDP-LIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRE 443
HDGR I D L D++ + + + F G +TGG ++G +VSR+
Sbjct: 137 HDGRNILVSDAKLYDSGDTLVISLPDQSVAGHHPFSKGATAYLTGGSHIGITAKVVSRD 195
>UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1;
Methanococcoides burtonii DSM 6242|Rep: Ribosomal
protein S4E - Methanococcoides burtonii (strain DSM
6242)
Length = 236
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/68 (29%), Positives = 39/68 (57%)
Frame = +1
Query: 25 EVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEA 204
E +++ + + VDG R D +P G MD+++I N +R++ D K R ++++ A
Sbjct: 56 EAKRVLSEGNVLVDGVARKDLRFPVGLMDIITIPLNNVEYRVMLDGKSRLVLNKLDGTGA 115
Query: 205 KYKLCKVK 228
KLC+++
Sbjct: 116 D-KLCRIE 122
Score = 41.9 bits (94), Expect = 0.016
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +3
Query: 318 DSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTI 431
DSI L + K++ IK+E GNL MI GG + G VG+I
Sbjct: 152 DSIILSVPDKKVVKHIKYEVGNLAMIVGGSHAGEVGSI 189
>UniRef50_UPI0000D9BECC Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 126
Score = 40.7 bits (91), Expect = 0.037
Identities = 25/73 (34%), Positives = 32/73 (43%)
Frame = +1
Query: 415 GVWAPSCPARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHR 594
G WA S P R+ PA + SR R PSP R+H G ++ R + R
Sbjct: 34 GPWALSDPGRERPAWIAVKGSRL-RAQPSPGAAPRIHRSSERRGCSAELRPNRSRAARTR 92
Query: 595 RGTGSSAFGAQSP 633
G GSS +SP
Sbjct: 93 PGRGSSGDPGESP 105
>UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 246
Score = 39.5 bits (88), Expect = 0.085
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +1
Query: 25 EVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKG 168
E L I KQ+ +KV+ K + DPT+P D SIE +++ L+ + KG
Sbjct: 126 EELDINKQQKVKVEHKKQLDPTFPRNDFDKFSIEDMDQVLNLLSNYKG 173
>UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S4E -
Haloarcula marismortui (Halobacterium marismortui)
Length = 234
Score = 39.1 bits (87), Expect = 0.11
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
L YA E + + + ++GK +D P G D+++ + E +R+ GR +
Sbjct: 47 LGYADNRKEARYALNEDNVLINGKAISDEERPVGMFDILAFTEREEYYRVFPGEGGRLAL 106
Query: 181 HRITPEEAKYKLCKV 225
I P+ A+ KL K+
Sbjct: 107 TAIDPDAAQSKLGKI 121
>UniRef50_A4HWV4 Cluster: Histone h3; n=2; Leishmania|Rep: Histone
h3 - Leishmania infantum
Length = 243
Score = 38.3 bits (85), Expect = 0.20
Identities = 30/95 (31%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +1
Query: 343 LRRLWTSSSLSPGTCV*SREAVTWGVWAPSCPARDIPAPSTLCTSRTPRDTPSPRVEQRV 522
+RR + L+PG R+ + P+ P R +PAP R + P EQR
Sbjct: 143 VRREEVAPPLAPGHLRDPRDPQVPEEYEPADPVRAVPAPGARGVERAEGGSALP--EQRY 200
Query: 523 HNRQGHEGRTSRCRAGKGHPP--HHRRGTGSSAFG 621
H G +G RC A GH P H R A G
Sbjct: 201 HGAAGGDGGV-RCVADGGHEPRLHPREARDDPAEG 234
>UniRef50_A2VZS4 Cluster: 2-methylcitrate dehydratase; n=1;
Burkholderia cenocepacia PC184|Rep: 2-methylcitrate
dehydratase - Burkholderia cenocepacia PC184
Length = 366
Score = 37.1 bits (82), Expect = 0.45
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +1
Query: 403 AVTWGVWAPSCPARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHP 582
A TWG+ + + +P P+ + R + R+ +R+ G GR + RA +
Sbjct: 252 AKTWGLLRRAVRRQAVPLPAPVRHVRDGKRAVQDRIPRRISCADGRRGRAAAARAARRGG 311
Query: 583 PHHRR 597
PH RR
Sbjct: 312 PHDRR 316
>UniRef50_Q5D9J3 Cluster: SJCHGC00596 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC00596 protein - Schistosoma
japonicum (Blood fluke)
Length = 348
Score = 36.7 bits (81), Expect = 0.60
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +1
Query: 448 IPAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGTGSSAFGA 624
IP+ ST S PR P P E+ V N HE ++RCR PP G S+ G+
Sbjct: 191 IPS-STGFDSSCPRQPPPPPYEEAVFN--DHEDHSTRCRRNPSAPPSPEYGWSSNVMGS 246
>UniRef50_Q4S9B3 Cluster: Chromosome undetermined SCAF14699, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14699, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 440
Score = 35.9 bits (79), Expect = 1.0
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 451 PAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGK-GHPPHHRRGTGSSAFGAQ 627
P PS + + T +T S H+R T+RC AG+ G H+RG G GA+
Sbjct: 209 PTPSIIQAAPTDSETKSNGGASGTHSR------TARCSAGQEGRGGRHQRGQGPQQAGAR 262
Query: 628 SPP 636
+PP
Sbjct: 263 APP 265
>UniRef50_A0TQD3 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia cenocepacia MC0-3
Length = 920
Score = 35.9 bits (79), Expect = 1.0
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 478 RTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHR 594
RTP P+PR++ VH +GH T R + P HHR
Sbjct: 424 RTP-GRPAPRIDPAVHEARGHPRETQRTDEDRRLPDHHR 461
>UniRef50_A4R522 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 3251
Score = 35.9 bits (79), Expect = 1.0
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 472 TSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGTGSSAFGAQSPPLQ 642
+SRTPR+ +PR E+ + G E + R + P HHR +GS + + P Q
Sbjct: 2887 SSRTPREDRTPREERTPRDENGDEKKHHR----RSRPDHHRDASGSMSSPSHKPRRQ 2939
>UniRef50_UPI0000EB020D Cluster: UPI0000EB020D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB020D UniRef100
entry - Canis familiaris
Length = 371
Score = 35.5 bits (78), Expect = 1.4
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +1
Query: 484 PRDTPSP--RVEQRVH-NRQGHEGRTSRCRAGKGHPPHHRRGTGSS 612
PR++P P R R H +R G G +SR +GHPPH TG++
Sbjct: 216 PRESPPPPRRAGPRGHPHRPGPRGHSSRRPGPQGHPPHRPGPTGAT 261
>UniRef50_A7RGY6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 189
Score = 35.5 bits (78), Expect = 1.4
Identities = 29/79 (36%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = +1
Query: 415 GVWAPSCPARDIPAPS--TLCTSR---TPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGH 579
G WA SCP+R P S L SR PR P P R +R R+ R G G
Sbjct: 103 GHWASSCPSRGDPRDSRDVLTDSRPPYRPRRRPLPPPPPRYRSR----SRSPPPRRGYGP 158
Query: 580 PPHHRRGTGSSAFGAQSPP 636
PP RR + S + PP
Sbjct: 159 PPRARRRSMSPPRRPRPPP 177
>UniRef50_Q9D5Q4 Cluster: Adult male testis cDNA, RIKEN full-length
enriched library, clone:4930400K19 product:hypothetical
Arginine-rich region containing protein, full insert
sequence; n=1; Mus musculus|Rep: Adult male testis cDNA,
RIKEN full-length enriched library, clone:4930400K19
product:hypothetical Arginine-rich region containing
protein, full insert sequence - Mus musculus (Mouse)
Length = 141
Score = 34.7 bits (76), Expect = 2.4
Identities = 26/72 (36%), Positives = 31/72 (43%)
Frame = +1
Query: 433 CPARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGTGSS 612
C A P++ RT P+P R E RT R R G+G P H RG G+
Sbjct: 71 CRAGPAARPASRRRRRTEPAAPAPIWRIRPARCSDEETRTGRRRPGRGRNP-HSRGEGAL 129
Query: 613 AFGAQSPPLQLR 648
GA PL LR
Sbjct: 130 RRGA--TPLSLR 139
>UniRef50_Q6AL56 Cluster: Putative uncharacterized protein; n=1;
Desulfotalea psychrophila|Rep: Putative uncharacterized
protein - Desulfotalea psychrophila
Length = 1279
Score = 34.7 bits (76), Expect = 2.4
Identities = 27/103 (26%), Positives = 45/103 (43%)
Frame = -3
Query: 691 GEKRQFFKKFHCRLPLIEAGDFGLRMRLIPFLGDGEADALCPRGSEMYALRALADYEHVV 512
GE Q F+K ++PL + G + FL +G+ DA +++A R+ D E V
Sbjct: 127 GEAIQLFQKVFAKVPLTKPGLLAAKKMAEIFLQEGKVDAALSLLRQVFA-RSPDDLE-TV 184
Query: 511 QLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRPPVIIHK 383
+ +A++C L K L +P R L+ + K
Sbjct: 185 KTLAQICLNRELFAEAEKYFNILMEQKGLPARFALQASAVFIK 227
>UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2;
Thermoprotei|Rep: Ribosomal protein S4E - Cenarchaeum
symbiosum
Length = 238
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +1
Query: 16 TGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITP 195
T E K + ++VDG RT + G MDVV + T +++R++ +I
Sbjct: 58 TLREAKKSIYSGNVEVDGVKRTSLHHGIGLMDVVELGGTGDIYRMVPSGGAILKPVKIEA 117
Query: 196 EEAKYKLCKV 225
E K+C+V
Sbjct: 118 AEKDRKICRV 127
>UniRef50_Q9H7Y0 Cluster: Uncharacterized protein CXorf36 precursor;
n=17; Amniota|Rep: Uncharacterized protein CXorf36
precursor - Homo sapiens (Human)
Length = 182
Score = 34.7 bits (76), Expect = 2.4
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 88 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVRTW 264
+YPA + D I + E+FRL+ + + RI + K C ++RV + + W
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERVLRKTERFQKW 154
>UniRef50_UPI0000E80C82 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 254
Score = 34.3 bits (75), Expect = 3.2
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Frame = +1
Query: 427 PSCPARD---IPAPSTLCTS---RTPRDTPSP-RVEQRVHNRQGHEGRTSRCRAGKGHPP 585
P CPA+ +PAP + PR P P R +QR R R RAG+ PP
Sbjct: 125 PPCPAQRPPRLPAPLSAPGGGRLAAPRAAPGPHRRQQRARRRHAPLQAAGRARAGRTRPP 184
Query: 586 HHRRGTGSSA 615
R + SA
Sbjct: 185 RRRLQSAESA 194
>UniRef50_UPI00005A603F Cluster: PREDICTED: hypothetical protein
XP_549800; n=1; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_549800 - Canis familiaris
Length = 253
Score = 34.3 bits (75), Expect = 3.2
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 298 THLSKSTIPSS*TLQLRRLWTS-SSLSPGTCV*SREAVTWGVWAPSCPARDIPAPSTLCT 474
THLS +T + T LR W S ++ +PG SR T G SC R A T CT
Sbjct: 126 THLSITTSIGA-TCALRATWASDTTCTPGATCASRATCTPGA---SCSLRATCASVTTCT 181
Query: 475 SRTPRDTPSP 504
R R T +P
Sbjct: 182 PRVMRATLTP 191
>UniRef50_UPI00005A516D Cluster: PREDICTED: hypothetical protein
XP_855920; n=1; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_855920 - Canis familiaris
Length = 335
Score = 34.3 bits (75), Expect = 3.2
Identities = 26/92 (28%), Positives = 35/92 (38%)
Frame = +1
Query: 358 TSSSLSPGTCV*SREAVTWGVWAPSCPARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQG 537
T + +PG SR A S PAR P+ ST S R TP+ R +
Sbjct: 82 TPARSTPGRSTPSRSTPARSTPARSKPARSTPSRSTPTRSTPSRSTPARSTPARSTPARS 141
Query: 538 HEGRTSRCRAGKGHPPHHRRGTGSSAFGAQSP 633
GR++ R+ G R S G +P
Sbjct: 142 TPGRSTPSRSTPGRSTPSRSTPSRSTPGRSTP 173
Score = 33.9 bits (74), Expect = 4.2
Identities = 28/95 (29%), Positives = 39/95 (41%)
Frame = +1
Query: 358 TSSSLSPGTCV*SREAVTWGVWAPSCPARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQG 537
T S +PG SR + A S PAR P+ ST S R TPS R +
Sbjct: 162 TPSRSTPGRSTPSRSTPSRSTPARSTPARSTPSRSTPARSTPSRSTPSRSTPARSTPSRS 221
Query: 538 HEGRTSRCRAGKGHPPHHRRGTGSSAFGAQSPPLQ 642
R++ R+ R T S + A++ PL+
Sbjct: 222 TPSRSTPSRSTPSRST-PARSTPSRSTPARTRPLE 255
>UniRef50_Q62DE6 Cluster: Putative uncharacterized protein; n=15;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia mallei (Pseudomonas mallei)
Length = 142
Score = 34.3 bits (75), Expect = 3.2
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
Frame = +1
Query: 295 QTHLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SREAVTWGVWAPSCPARDIPAPSTLCT 474
Q + T+P S RR+ + +++ + A + AP+ PA + L
Sbjct: 32 QRRTMRETMPISLPRAARRIAVALAIA---ALPPAAAFAYSPTAPTAPAAH--GEADLDR 86
Query: 475 SRTPRDTPSPRVEQRVHNRQGH--EGRTSRCRAGKGHPPHHRRGTGSSAFG 621
T R+ V H++ G EG T+RCR G HRRGT S G
Sbjct: 87 HDTYRNRDGDTVHAPAHSKSGRAPEGATARCRDGAYSFSRHRRGTCSGHGG 137
>UniRef50_Q1B190 Cluster: 5-oxoprolinase; n=2; Mycobacterium|Rep:
5-oxoprolinase - Mycobacterium sp. (strain MCS)
Length = 765
Score = 34.3 bits (75), Expect = 3.2
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 436 PARDIPA-PSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPH-HRR 597
P+ PA P + RTP TP+ R+ +R H+ + R G PPH HRR
Sbjct: 680 PSSSDPARPPSSTKWRTPSSTPARRIPEREHSHRHSRRRGCHHLRGGPQPPHRHRR 735
>UniRef50_Q0IRJ8 Cluster: Os11g0623700 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0623700 protein -
Oryza sativa subsp. japonica (Rice)
Length = 245
Score = 34.3 bits (75), Expect = 3.2
Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +1
Query: 424 APSCPARDIPAPST--LCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRR 597
+P P I + ST LC S PR PR+ RQ + R R PP H R
Sbjct: 102 SPPSPVPPISSCSTHALCPSILPRPGLRPRLLLPPPPRQRQQQRRRRRLVLASLPPGHAR 161
Query: 598 -GTGSSAFGAQSPPL 639
G G + GA+ PPL
Sbjct: 162 MGKGKNNEGAELPPL 176
>UniRef50_O62543 Cluster: Serum response factor; n=1; Geodia
cydonium|Rep: Serum response factor - Geodia cydonium
(Sponge)
Length = 383
Score = 34.3 bits (75), Expect = 3.2
Identities = 25/83 (30%), Positives = 33/83 (39%), Gaps = 6/83 (7%)
Frame = +1
Query: 355 WTSSSLSP---GTCV*SREAVTWGVWAPSCPARDIPAPST-LCTSRTPRDTPSPRVEQRV 522
WT + SP G+C +++ + PSCP PS R PR P +
Sbjct: 198 WTRAPSSPFLTGSCRCRSPSLSLSLGHPSCPPSPGCTPSRPSLPPRRPRALTPPLLLATP 257
Query: 523 HNRQ--GHEGRTSRCRAGKGHPP 585
H+ H G T CR HPP
Sbjct: 258 HHSSHPAHHGPTPPCRTRGAHPP 280
>UniRef50_Q9P557 Cluster: Related to merozoite surface antigen 2;
n=1; Neurospora crassa|Rep: Related to merozoite surface
antigen 2 - Neurospora crassa
Length = 388
Score = 34.3 bits (75), Expect = 3.2
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 361 SSSLSPGTCV*SREAVTWGVWAPSCPARDIPAPSTLCTSRTPRDTPSP 504
S+S + T VT G+ P A P+P+T T+ P DTP P
Sbjct: 276 STSAAAATAAAPTNEVTDGLRKPDASAEQQPSPTTATTTTPPTDTPKP 323
>UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_03000514;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03000514 - Ferroplasma acidarmanus fer1
Length = 317
Score = 33.9 bits (74), Expect = 4.2
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -1
Query: 141 QFISLLN*DNIHKSSRISRVSPNFPINLYEALFHNFQDFVSGQSIL 4
Q I+ N +NI + I + N P E LFH F DFVSG ++
Sbjct: 50 QVINTYNDENILEIINIPDIKYNIPDAEKEILFHKFIDFVSGNKLI 95
>UniRef50_A1UQD5 Cluster: Putative uncharacterized protein; n=2;
Mycobacterium|Rep: Putative uncharacterized protein -
Mycobacterium sp. (strain KMS)
Length = 264
Score = 33.9 bits (74), Expect = 4.2
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Frame = +1
Query: 394 SREAVTWGVWAPSCPARDI-PAPSTLCTSRTPRD----TPSPRVEQRVHNR--QGHEGRT 552
+R+A C R+ PAP+TLC SR + + S + +R G + R+
Sbjct: 150 ARDAAAASASQACCSGRNRGPAPTTLCRSRHSANRHGRSTSAGIGAASTSRICSGRQPRS 209
Query: 553 SRCRAGKGHPPHHRRGTGSSAFGAQSP 633
RCR + P HR+ GS A GA P
Sbjct: 210 KRCRISR--PSIHRKCFGSRANGAGKP 234
>UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 546
Score = 33.9 bits (74), Expect = 4.2
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 499 SPRVEQRVHNRQGHEGRTS--RCRAGKGHPPHHRRGTGSS 612
+P Q+VH R+ G + +G HPPHHR+G S
Sbjct: 439 TPEYVQKVHEREMKSGEEAIHLPNSGTHHPPHHRKGANGS 478
>UniRef50_UPI0000EBD246 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 253
Score = 33.5 bits (73), Expect = 5.6
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +1
Query: 436 PARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGTGSS- 612
P R +P L T PR SP + + +G R+ R G G PH +RG G S
Sbjct: 70 PPRQLPP---LWTPHPPRGPGSPSGKAKAQRGRGRR-RSPRRPRGLGARPHPKRGRGRSW 125
Query: 613 --AFGAQSPP 636
A GA +PP
Sbjct: 126 RAARGAGAPP 135
>UniRef50_UPI000045C0C9 Cluster: hypothetical protein Npun02007497;
n=1; Nostoc punctiforme PCC 73102|Rep: hypothetical
protein Npun02007497 - Nostoc punctiforme PCC 73102
Length = 232
Score = 33.5 bits (73), Expect = 5.6
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 514 QRVHNRQG-HEGRTSRCRAGKGHPPHHRRGTGSSAFGAQSPP 636
QR RQG H+ RT RAG+G P RG + G PP
Sbjct: 36 QRKRRRQGEHKKRTGEGRAGRGGRPRXXRGGPRARAGGTRPP 77
>UniRef50_A4H4L8 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 1818
Score = 33.5 bits (73), Expect = 5.6
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Frame = +1
Query: 280 APSAIQTHLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SREAV---TWGVWAPSCPARDI 450
AP+ ++ S+ SS +L + T+++ G+ V S + V V +P PA +
Sbjct: 1035 APTLTSATVAASS--SSLSLPTPHVATAAADEAGSSVASAKGVDVRAIAVPSPPAPAAPV 1092
Query: 451 -PAPST---LCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCR 564
P PS+ S P D+P R + H+R+GH +SR R
Sbjct: 1093 HPGPSSSGWAIESALPPDSPRHRSRESRHHRKGHSSSSSRSR 1134
>UniRef50_A7F9K5 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1740
Score = 33.5 bits (73), Expect = 5.6
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +1
Query: 412 WGVWAPSCPARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQG-HEGRTSRCRAGKGHPPH 588
W PS PA PS + PR +P+P VH G H R G PPH
Sbjct: 1541 WPPQPPSYPATAPSYPSNTPYNNWPRHSPAPANVAVVHQVNGNHSPRMPGVTPQLGGPPH 1600
Query: 589 HRR 597
+R+
Sbjct: 1601 NRQ 1603
>UniRef50_UPI0000E21FCD Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 326
Score = 33.1 bits (72), Expect = 7.4
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 493 TPSPRVEQRVHNRQGHEGRT-SRCRAGKGHPPHHRRGTGSSAFGAQSPPLQLRV 651
TP+P E + GRT S+ PPH RRG G+ + G +P +L++
Sbjct: 111 TPTPGAEPGPASPVTRPGRTESKMATPPPPPPHSRRGQGAPSRGGLAPETRLKI 164
>UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1);
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1)
- Tribolium castaneum
Length = 768
Score = 33.1 bits (72), Expect = 7.4
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 261 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMI 395
+ DGR ++ D +IKVND ++TT+I+D ++ G +C++
Sbjct: 708 VAARDGR-LKPGDRVIKVNDESVEHLSTTEIIDLLRIVRGPVCIV 751
>UniRef50_Q0S5H2 Cluster: Undecaprenyl-phosphate galactose
phosphotransferase; n=4; Bacteria|Rep:
Undecaprenyl-phosphate galactose phosphotransferase -
Rhodococcus sp. (strain RHA1)
Length = 488
Score = 33.1 bits (72), Expect = 7.4
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -2
Query: 500 EGVSRGVLDVHNVEGAGMSLAGHDGAHTPQVTASRDHTQVPGLKLDEVHNLRSCN 336
E +RG D + V G+ + GH G H ++T + V G +LD + +L C+
Sbjct: 172 ESFARGTADGYRV--VGVCIPGHSGEHGDKITVAGRDIPVLGSELDVIDSLGFCH 224
>UniRef50_A5P2Y6 Cluster: Putative uncharacterized protein; n=4;
cellular organisms|Rep: Putative uncharacterized protein
- Methylobacterium sp. 4-46
Length = 1080
Score = 33.1 bits (72), Expect = 7.4
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +1
Query: 487 RDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGTGSSAFG 621
R P PR + H GR RC A +G PH R G A G
Sbjct: 814 RGLPRPRRGRGEHPDAPRPGRRDRCAAARGPRPHRGRRRGGGARG 858
>UniRef50_A0YER0 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 110
Score = 33.1 bits (72), Expect = 7.4
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +2
Query: 305 YQSQRFHPVRHCNYEDYGLHQV*VRELVY--DHGRP*LGACGHHRVPRETSRLLRHCAHQ 478
+ + + HP+R Y G+ V++LV DH R A HR R RL + H+
Sbjct: 31 FHAFKIHPLRIA-YRT-GIDVTLVQQLVSGEDHQRLFKAALARHRKSRRDQRLHKSLRHK 88
Query: 479 GLHGTHLRHELNNVFIIGKGTK 544
G+ L+H++ + KG K
Sbjct: 89 GIAQAELQHKIEQDYQETKGQK 110
>UniRef50_Q6Z321 Cluster: Epstein-Barr virus EBNA-1-like; n=2; Oryza
sativa (japonica cultivar-group)|Rep: Epstein-Barr virus
EBNA-1-like - Oryza sativa subsp. japonica (Rice)
Length = 234
Score = 33.1 bits (72), Expect = 7.4
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 418 VWAPSCPARDIPAPSTLCT-SRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHR 594
VW P+C + S + + T R TP+ R + + R+G +G CR GK
Sbjct: 3 VWEPTCAVKGASWRSAVAAKAATGRMTPARRKKGK---RRGRKGGLPLCRFGKKEERLTA 59
Query: 595 RGTGSSAFGAQSPPLQ 642
TG SA A++ LQ
Sbjct: 60 AATGRSATTARARGLQ 75
>UniRef50_Q3ECN0 Cluster: Uncharacterized protein At1g56530.1; n=1;
Arabidopsis thaliana|Rep: Uncharacterized protein
At1g56530.1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 185
Score = 33.1 bits (72), Expect = 7.4
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 451 PAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGT---GSSAFG 621
P P + T PSP + H+R RT+ A G PPHHRR T G++
Sbjct: 90 PPPLPENRAATAGQPPSPSPDNHRHHR-----RTTTA-AVAGQPPHHRRTTAAAGTTTIA 143
Query: 622 AQSPP 636
Q PP
Sbjct: 144 GQPPP 148
>UniRef50_A5YVK6 Cluster: Regulator of chromosome condensation 1; n=1;
Toxoplasma gondii|Rep: Regulator of chromosome
condensation 1 - Toxoplasma gondii
Length = 1155
Score = 33.1 bits (72), Expect = 7.4
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +3
Query: 555 SLPRGQRASASPSPRNGIKRIRSPKSPASIKGKRQ 659
++PRG+R ++ P R G K+ R + PA+ KG+R+
Sbjct: 1047 TVPRGKRETSRPPSRVGEKKQRETEKPAARKGERK 1081
>UniRef50_A6QU28 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 630
Score = 33.1 bits (72), Expect = 7.4
Identities = 20/66 (30%), Positives = 24/66 (36%)
Frame = +1
Query: 436 PARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGTGSSA 615
PA +P + S +P HN H R G GHPP H R S A
Sbjct: 343 PAMREQSPPSATQSSNDSVSPEASPAALAHNHDSHR-RYQNVEHGNGHPPPHTRPLYSHA 401
Query: 616 FGAQSP 633
+ A P
Sbjct: 402 YYAPPP 407
>UniRef50_UPI0000E2508C Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 352
Score = 32.7 bits (71), Expect = 9.7
Identities = 23/65 (35%), Positives = 28/65 (43%)
Frame = +1
Query: 445 DIPAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGTGSSAFGA 624
+IPA + SRT DT S RV R G T GK H G +A+ A
Sbjct: 131 EIPATPPVSGSRTSGDTSSASSNPRV-LRLGQPQNTVSPLPGKPHSTLELPNAGCAAYTA 189
Query: 625 QSPPL 639
SPP+
Sbjct: 190 SSPPV 194
>UniRef50_UPI0000DD8626 Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 270
Score = 32.7 bits (71), Expect = 9.7
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 561 PRGQRASASPSPR-NGIKRIRSPKSPASIKGKRQWNFLKNWRFSPDWAPCWGGPPYPNFA 737
PR R++ SPSPR + IRSP+ PA R + R P + GPP P+
Sbjct: 164 PRSDRSATSPSPRPPSLPPIRSPELPALRHRSRPQLLRCSPRNRSSPYPYFQGPPDPDRR 223
Query: 738 P 740
P
Sbjct: 224 P 224
>UniRef50_UPI000059FE9C Cluster: PREDICTED: hypothetical protein
XP_541426; n=1; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_541426 - Canis familiaris
Length = 390
Score = 32.7 bits (71), Expect = 9.7
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 415 GVWAPSCPARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGK-GHPPHH 591
GV APS P P P+ R+ R+ SPR +R +R+ T R A + G PP
Sbjct: 94 GVRAPSAPVDQQPGPARSGRRRSRRE--SPRPSERTRSRRSLPRGTRRPFAARAGSPPRE 151
Query: 592 R 594
R
Sbjct: 152 R 152
>UniRef50_Q82NB4 Cluster: Putative uncharacterized protein; n=1;
Streptomyces avermitilis|Rep: Putative uncharacterized
protein - Streptomyces avermitilis
Length = 425
Score = 32.7 bits (71), Expect = 9.7
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 436 PARDIPAPSTLCTSRTPRDTPSPRVEQRV 522
P D PS LCTS T RD PS R+ + +
Sbjct: 4 PPADPHGPSPLCTSLTERDMPSDRIRELI 32
>UniRef50_Q46YP4 Cluster: Putative uncharacterized protein; n=1;
Ralstonia eutropha JMP134|Rep: Putative uncharacterized
protein - Ralstonia eutropha (strain JMP134)
(Alcaligenes eutrophus)
Length = 310
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 457 PSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHP 582
P CT+R +D P PR + V +R H+ R R + HP
Sbjct: 2 PHERCTNRAGQDLPRPR-RRPVPHRDRHQSRRCHLRGARHHP 42
>UniRef50_Q1YI78 Cluster: Putative uncharacterized protein; n=1;
Aurantimonas sp. SI85-9A1|Rep: Putative uncharacterized
protein - Aurantimonas sp. SI85-9A1
Length = 2567
Score = 32.7 bits (71), Expect = 9.7
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = +1
Query: 406 VTWGVWAPSCPARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPP 585
+T G+W C AR P+ + R PR PR H R R RC + PP
Sbjct: 2442 MTDGIWRMICVARTTTRPAAVHRPRPPRRGARPRPVLHRHRRSSARPR-HRC-VLRPVPP 2499
Query: 586 HHRR 597
H R
Sbjct: 2500 HRHR 2503
>UniRef50_Q11ER6 Cluster: Putative uncharacterized protein
precursor; n=1; Mesorhizobium sp. BNC1|Rep: Putative
uncharacterized protein precursor - Mesorhizobium sp.
(strain BNC1)
Length = 635
Score = 32.7 bits (71), Expect = 9.7
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +1
Query: 436 PARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGTGSSA 615
PA++ +P+TL + PR+ P PR R G + + +AG+ P TG +A
Sbjct: 314 PAQEEQSPATLIAALPPRELPVPRAAPRPDANVGSDLLVASNQAGQ--EPAPPAATGPAA 371
Query: 616 FGAQSPPLQ 642
A P Q
Sbjct: 372 AEAPQQPAQ 380
>UniRef50_A6G3J3 Cluster: Site-specific recombinase, phage integrase
family protein; n=3; Plesiocystis pacifica SIR-1|Rep:
Site-specific recombinase, phage integrase family
protein - Plesiocystis pacifica SIR-1
Length = 363
Score = 32.7 bits (71), Expect = 9.7
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -3
Query: 622 LRMRLIPFLGDGEADALCPRGSEMYALRALADY 524
LR+ LIPF G DA+ PR E Y L DY
Sbjct: 84 LRLHLIPFFGYMRLDAIGPRHIERYKATKLKDY 116
>UniRef50_A0V7H4 Cluster: ABC-type nitrate/sulfonate/bicarbonate
transport systems periplasmic components-like; n=6;
Bacteria|Rep: ABC-type nitrate/sulfonate/bicarbonate
transport systems periplasmic components-like - Delftia
acidovorans SPH-1
Length = 487
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 496 PSPRVEQRVHNRQGHEGRTSRCRAGK-GHPPH 588
P R R+H RQ GR CR G GH PH
Sbjct: 75 PGRRRGGRIHGRQPRPGRRGHCRPGNDGHHPH 106
>UniRef50_Q4DW65 Cluster: Ubiquitin-protein ligase, putative; n=2;
Trypanosoma|Rep: Ubiquitin-protein ligase, putative -
Trypanosoma cruzi
Length = 3716
Score = 32.7 bits (71), Expect = 9.7
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = -3
Query: 622 LRMRLIPFLGDGEADALCPRGSEMYALRALADYEHVVQLVAKV 494
+++R++P G+AD++ PR + + L DY V L AK+
Sbjct: 3628 VKLRVLPLSSPGDADSVLPRAATCFFALELPDYSSVEVLKAKL 3670
>UniRef50_Q9Y8V1 Cluster: Putative uncharacterized protein; n=1;
Aeropyrum pernix|Rep: Putative uncharacterized protein -
Aeropyrum pernix
Length = 688
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -2
Query: 500 EGVSRGVLDVHNVEGAGMSLAGHDGAHTPQVTASRDHTQVPGLKLDEVHNL 348
+ +++G++D+ G G G HTP+V A + T PG +H L
Sbjct: 505 KSLAKGMIDLLWSPGGGYFRLSPPGPHTPEVPAEAEDTAYPGAYATAIHAL 555
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 823,565,691
Number of Sequences: 1657284
Number of extensions: 19199630
Number of successful extensions: 64385
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 59619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64239
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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