Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30553
(741 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 134 9e-32
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 133 2e-31
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 132 2e-31
01_01_0085 - 639959-640192,640290-640379,640465-640521,640826-64... 33 0.31
12_01_0376 - 2934115-2934603 32 0.42
12_02_1248 - 27330177-27330740 31 0.73
01_07_0099 - 41076056-41076059,41076135-41076175,41076937-410770... 31 0.96
12_02_1160 + 26592537-26593046,26593588-26593635 30 2.2
08_02_0824 + 21561699-21562415,21563294-21563362,21563424-215634... 30 2.2
05_03_0491 + 14682895-14683365,14684127-14684656,14684739-14685213 30 2.2
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 29 2.9
01_06_0188 - 27310814-27311138,27311197-27311547,27311682-273116... 29 2.9
03_02_1016 + 13228113-13228964 29 3.9
09_04_0377 + 17086775-17088310 29 5.1
08_02_0139 + 13065468-13065902,13067196-13067279,13068221-13068499 29 5.1
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120... 29 5.1
06_01_0116 - 907995-908813,909002-909286 29 5.1
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 5.1
10_07_0161 - 13674631-13675433,13675793-13675862 28 6.8
09_04_0007 - 13641012-13641431,13642220-13642312,13642429-136425... 28 6.8
08_02_1196 - 25190040-25190065,25190224-25190302,25190554-251906... 28 6.8
06_03_0813 - 24853119-24854480,24854711-24855442,24855556-248559... 28 6.8
02_05_0202 + 26708049-26709074 28 6.8
02_04_0144 - 20177136-20177231,20177525-20178010,20178103-20178162 28 6.8
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 28 6.8
03_02_0720 + 10662494-10663564 23 7.9
12_01_0081 - 657672-657713,657993-658151,658359-658919 28 9.0
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 28 9.0
06_03_1011 - 26882011-26882157,26882576-26884248,26884607-268847... 28 9.0
06_01_0027 - 271199-271424,271628-272095,272721-273018,273133-27... 28 9.0
05_05_0030 - 21698625-21698752,21699589-21699627,21699708-216998... 28 9.0
03_01_0408 + 3151984-3152666,3156061-3156368,3157594-3157946 28 9.0
02_02_0353 + 9276316-9276518,9276915-9277314 28 9.0
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 134 bits (323), Expect = 9e-32
Identities = 57/106 (53%), Positives = 77/106 (72%)
Frame = +3
Query: 255 PYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIV 434
PYL T+DGRTIRYPDPLIK ND+I++D+ T KI+DFIKF+ GN+ M+TGGRN GRVG I
Sbjct: 137 PYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIK 196
Query: 435 SRERHPGSFDIVHIKDSTGHTFXXXXXXXXXXXXXXXXYISLPRGQ 572
+RE+H GSF+ +H++D+ GH F ++SLP+G+
Sbjct: 197 NREKHKGSFETIHVEDALGHAFATRLGNVFTIGKGNKPWVSLPKGK 242
Score = 113 bits (272), Expect = 1e-25
Identities = 52/85 (61%), Positives = 64/85 (75%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LKYALT EV+ I+ QR + VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF +
Sbjct: 52 LKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRL 111
Query: 181 HRITPEEAKYKLCKVKRVATGPKNV 255
+ E+AK+KLCKV+ V G K +
Sbjct: 112 QSVKDEDAKFKLCKVRSVQFGQKGI 136
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 133 bits (321), Expect = 2e-31
Identities = 57/106 (53%), Positives = 77/106 (72%)
Frame = +3
Query: 255 PYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIV 434
P+L T+DGRTIRYPDPLIK ND+I++D+ T KI+DFIKF+ GN+ M+TGGRN GRVG I
Sbjct: 153 PFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTGGRNTGRVGVIK 212
Query: 435 SRERHPGSFDIVHIKDSTGHTFXXXXXXXXXXXXXXXXYISLPRGQ 572
SRE+H GSF+ +H++D+ GH F ++SLP+G+
Sbjct: 213 SREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGK 258
Score = 119 bits (286), Expect = 3e-27
Identities = 56/85 (65%), Positives = 65/85 (76%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LKYALT EV+ I+ QR + VDGKVRTD TYPAGFMDVVSI KT E FRL+YD KGRF +
Sbjct: 68 LKYALTYREVISILMQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRL 127
Query: 181 HRITPEEAKYKLCKVKRVATGPKNV 255
H I E+AK+KLCKV+ V G K +
Sbjct: 128 HSIKDEDAKFKLCKVRSVQFGQKGI 152
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 132 bits (320), Expect = 2e-31
Identities = 56/106 (52%), Positives = 77/106 (72%)
Frame = +3
Query: 255 PYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIV 434
PYL T+DGRTIRYPDP+IK ND+I++D+ T KI+DFIKF+ GN+ M+TGGRN GRVG I
Sbjct: 137 PYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIK 196
Query: 435 SRERHPGSFDIVHIKDSTGHTFXXXXXXXXXXXXXXXXYISLPRGQ 572
+RE+H GSF+ +H++D+ GH F ++SLP+G+
Sbjct: 197 NREKHKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGK 242
Score = 113 bits (272), Expect = 1e-25
Identities = 52/85 (61%), Positives = 64/85 (75%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LKYALT EV+ I+ QR + VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF +
Sbjct: 52 LKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRL 111
Query: 181 HRITPEEAKYKLCKVKRVATGPKNV 255
+ E+AK+KLCKV+ V G K +
Sbjct: 112 QSVKDEDAKFKLCKVRSVQFGQKGI 136
>01_01_0085 -
639959-640192,640290-640379,640465-640521,640826-640858,
640972-641046,641141-641230,641343-641444,641643-641713,
642243-642396,642497-642573,643077-643113
Length = 339
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +1
Query: 481 TPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKG 576
TP PSPR E + G RTS CR G G
Sbjct: 249 TPAAEPSPRAEAPQEEQWGFVSRTSSCREGSG 280
>12_01_0376 - 2934115-2934603
Length = 162
Score = 32.3 bits (70), Expect = 0.42
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 579 SASPSPRNGIKRIRSPKSPASIKGKRQWNFLKNWRFSPDWAPCWGGPPY 725
S+SPSP +R+RSP + G + L++WR P A PP+
Sbjct: 8 SSSPSPPRKFRRVRSPLANGGAAGDFE---LRHWRTPPKRARSSAAPPW 53
>12_02_1248 - 27330177-27330740
Length = 187
Score = 31.5 bits (68), Expect = 0.73
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3
Query: 567 GQRASASPSPRNGIKRIRSPKSPASIKGKRQWNFLKNWRFSPDWAPCWG 713
G R A +P GIKR++ ++ AS G + L NWR S PC G
Sbjct: 4 GDRQEAE-APVAGIKRVKEEEATASPSGGEKKKILPNWRKSS--IPCEG 49
>01_07_0099 -
41076056-41076059,41076135-41076175,41076937-41077041,
41077476-41077552,41078773-41078944,41079099-41079194,
41080268-41080465
Length = 230
Score = 31.1 bits (67), Expect = 0.96
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 555 SLPRGQRASASPSPRNGIKRIRSPKSPASIKGKRQWNFLKNWRFSPDW 698
SLPR A+ASP+P + SP + I G Q + L + P W
Sbjct: 38 SLPRDPAAAASPAPAPRQPAVGSPLGLSKIPGYEQTSRLSGTQVLPRW 85
>12_02_1160 + 26592537-26593046,26593588-26593635
Length = 185
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/87 (25%), Positives = 39/87 (44%)
Frame = +1
Query: 355 WTSSSLSPGTCV*SREAVTWGVWAPSCPARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQ 534
W +++ G+ + R + WA +C R P PS + +R+P P+ ++R+ +
Sbjct: 10 WWATAGGSGSGLDGRGELDLERWA-TCVDRPPPPPSVVAGARSPARRPAEAAQRRI---R 65
Query: 535 GHEGRTSRCRAGKGHPPHHRRGTGSSA 615
G T+ R G RG+G A
Sbjct: 66 ADLGTTALPRVDLGTTALPPRGSGGGA 92
>08_02_0824 +
21561699-21562415,21563294-21563362,21563424-21563459,
21564533-21564600,21565259-21565277,21565662-21565763,
21566173-21566288,21566501-21566595,21568093-21568264,
21568413-21568493,21569732-21569801,21570106-21570132
Length = 523
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 553 SRCRAGKGHPPHHRRGTGSSAFGAQSPPLQLR 648
+RCR G PPH + GA SPP + R
Sbjct: 60 ARCRGGDHQPPHPPEAALEALRGAASPPARRR 91
>05_03_0491 + 14682895-14683365,14684127-14684656,14684739-14685213
Length = 491
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 571 KGHPPHHRRGTGSSAF-GAQSPPLQLRVNGN 660
K P H G G+ F G SPP +LRVN N
Sbjct: 273 KSVDPAHLLGVGAEGFYGPSSPPARLRVNPN 303
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/77 (28%), Positives = 27/77 (35%), Gaps = 3/77 (3%)
Frame = +1
Query: 397 REAVTWGVWAP---SCPARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRA 567
R +V W A S PA+ P +RTPR +P E H + S
Sbjct: 508 RASVVWDQEAGRYVSVPAQTRAVPGLDLPARTPRFLANPTGESSNHGKNLAPANASSSAI 567
Query: 568 GKGHPPHHRRGTGSSAF 618
G P TG S F
Sbjct: 568 SSGQPSERLTYTGQSIF 584
>01_06_0188 -
27310814-27311138,27311197-27311547,27311682-27311693,
27313598-27313662,27314945-27314968
Length = 258
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +1
Query: 475 SRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAG---KGHPPHHRRGTGSSAFGAQSPPLQL 645
SR+P +PSPR + H+R + GR G G H R G SPP +
Sbjct: 174 SRSP--SPSPRHRRERHDRDDYRGRDDYSGGGGRRGGSSRHERHDDGGRRRHGGSPPRRA 231
Query: 646 R 648
R
Sbjct: 232 R 232
>03_02_1016 + 13228113-13228964
Length = 283
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/80 (30%), Positives = 29/80 (36%)
Frame = +1
Query: 421 WAPSCPARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRG 600
W PS RDI R PR QR H + + G+ HH
Sbjct: 18 WLPSEVLRDIGIADADERRRLAIVEDRPRQAQRPLFSCHHRPQVTGGDGGEMLRDHHALA 77
Query: 601 TGSSAFGAQSPPLQLRVNGN 660
A +PPLQLR+ GN
Sbjct: 78 GAGRPRVAATPPLQLRLVGN 97
>09_04_0377 + 17086775-17088310
Length = 511
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 552 ISLPRGQRASASPSPRNGIKRIRSP-KSPASIKGKRQWNFLKNWRFSPDWAP 704
+ LP R SASPSPR R RSP +SP+ + +R+ +R D +P
Sbjct: 12 VHLPGRSRVSASPSPR----RRRSPSRSPSPRRNRRRDRSPSPYRSRRDRSP 59
>08_02_0139 + 13065468-13065902,13067196-13067279,13068221-13068499
Length = 265
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +1
Query: 424 APSCPARDIPAP-STLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRG 600
A + PA P +L RD P R ++ R G+ AG+GH RG
Sbjct: 57 AAAVPAARAPRTVGSLLRLNDLRDNPGARKQKTRKGRGIGSGKGKT--AGRGHKGQKARG 114
Query: 601 TGSSAFGAQSPPLQLRVNGNG 663
T F PL+ R+ G
Sbjct: 115 TARFGFEGGQTPLRRRLPRRG 135
>07_01_0172 -
1201595-1201912,1202637-1202723,1202836-1202895,
1203007-1203106,1203227-1203633,1204728-1204883,
1204981-1205106,1205503-1205572,1205679-1205767
Length = 470
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -1
Query: 516 LFNSWRRCVPWSP*CA--QCRRSRDVSRGTRWCPHAPSY 406
L ++ +RC+P S A +CR+SR S+ W P+ S+
Sbjct: 418 LVDAVQRCLPESLRAAVQRCRQSRPASKVVEWAPYRHSF 456
>06_01_0116 - 907995-908813,909002-909286
Length = 367
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 580 PPHHRRGTGSSAFGAQSPPL 639
PPHHR G +S +G++ PPL
Sbjct: 32 PPHHRAGGAASGYGSR-PPL 50
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +1
Query: 424 APSCPARDI--PAPSTLCTSRTPRDTPSP 504
AP P+ D PAP T T +P TPSP
Sbjct: 70 APDAPSGDFFPPAPPTTTTPTSPGTTPSP 98
>10_07_0161 - 13674631-13675433,13675793-13675862
Length = 290
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -1
Query: 261 STDILRSGRHTLDFTQLVLSLLRGDTVDCESALNIID*TKQFIS 130
+TD LR H + +QLVL+LLRG D + + I T +S
Sbjct: 38 ATDALRDVGHAVSESQLVLNLLRGLNDDFSNTADNIAATDVLLS 81
>09_04_0007 -
13641012-13641431,13642220-13642312,13642429-13642521,
13642607-13642671,13643495-13643565,13643644-13643682,
13644709-13645121
Length = 397
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 193 PEEAKYKLCKVKRVATGPKNVRTW*RMMAAPSAIQTHLSKSTIP 324
PE K K V TGP VRT ++ S +Q +LS+ T+P
Sbjct: 287 PEALKIKYAD-PLVYTGPIRVRTGNEILRISSYLQRNLSRVTVP 329
>08_02_1196 -
25190040-25190065,25190224-25190302,25190554-25190646,
25190761-25190892,25191578-25191721,25192941-25193150,
25194915-25195406
Length = 391
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 505 VAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRPPVIIHKFPD 374
V KV PV+SL C + C+S + + PVI+ + D
Sbjct: 165 VLKVLPVKSLSCKQIERRSCISLEAFIRDYFLCESPVILSGYID 208
>06_03_0813 - 24853119-24854480,24854711-24855442,24855556-24855962,
24856091-24856359,24856681-24856733,24857019-24857078,
24857309-24857363,24858080-24858155,24858225-24858801
Length = 1196
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 455 LLRHCAHQGLHGTHLRHELNNVFIIGKGTKGVHLAAA 565
+L CAH GL G LRH + G +G H AAA
Sbjct: 1008 VLSACAHAGLVGEGLRHLSSMSSGYGLTPRGEHYAAA 1044
>02_05_0202 + 26708049-26709074
Length = 341
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 470 HNVEGAGMSLAGHDGAHTPQVTASRDHTQVPG 375
+ V +G +L GH +H A+ H Q PG
Sbjct: 268 YRVFASGQALGGHKKSHVCSAAAAAAHAQTPG 299
>02_04_0144 - 20177136-20177231,20177525-20178010,20178103-20178162
Length = 213
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +1
Query: 427 PSCPARDI-PAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKG--HPPHHRR 597
P+ P+ + PAP+ + + D PR+ R G G G G H H+
Sbjct: 49 PTSPSPSLAPAPTPVSGAGGGDDDMRPRLPTERWRRGGGRGEERHTGGGGGGSHHAHYAH 108
Query: 598 GTGSSAFGAQSP 633
G G + A SP
Sbjct: 109 GHGHAHAAAPSP 120
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 142 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 246
+ LIYD++G + + P++A L ++ V T P
Sbjct: 147 YALIYDIQGSLALPILDPDDASSPLAVLELVTTAP 181
>03_02_0720 + 10662494-10663564
Length = 356
Score = 23.4 bits (48), Expect(2) = 7.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 621 SPKSPASIKGKRQWNFLKN 677
S S +S +G R+W FLK+
Sbjct: 193 SSSSSSSARGSRRWVFLKD 211
Score = 23.0 bits (47), Expect(2) = 7.9
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 672 KNWRFSPDWA 701
K W+FSP WA
Sbjct: 235 KAWQFSPSWA 244
>12_01_0081 - 657672-657713,657993-658151,658359-658919
Length = 253
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -1
Query: 297 LDSGWCGHHALPSTDILRSGRHTLDFTQLVLSLLRGDTVDCESAL 163
+ S CG HA + D++ G ++ S+++ D +D E A+
Sbjct: 175 VSSKLCGTHAFDTLDLISLGSGRFCVAKMFSSMMQDDEIDMEFAV 219
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 27.9 bits (59), Expect = 9.0
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Frame = +1
Query: 415 GVWAPSCPARDIPAPSTLCTSRTPRDTP-----SPRVEQRVHNRQGHEGRTSRCRAGKGH 579
G+WAP P I + S+ T+ DTP S E+ + G + R+ +
Sbjct: 130 GLWAPLPPPHSIFSSSSSGTTVVDDDTPKGQRRSANAEESAPAAAANHGNSRLPRS--SY 187
Query: 580 PPHHRRGTGSSAFGAQSPPL 639
P H RG + A AQ+ L
Sbjct: 188 VPPHLRGQAAPAAPAQAGAL 207
>06_03_1011 -
26882011-26882157,26882576-26884248,26884607-26884783,
26885313-26885416,26885896-26886032
Length = 745
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 267 THDGRTIRYPDPLIKVNDSI-QLDIA---TTKIMDFIKFESGNLCMITG 401
+HD + + PDPL ND I ++ IA T ++D+ + + C + G
Sbjct: 599 SHDDKVVSEPDPLPVHNDKIDEVTIAAIQTCALVDYQQSQQNKPCSVNG 647
>06_01_0027 -
271199-271424,271628-272095,272721-273018,273133-273343,
273427-274124,274921-274969,276059-276112,276244-276275,
276319-276484,276563-276628,276717-276812,276868-276957,
277302-277398,277496-277575,277709-277753,278006-278134,
278593-278722,278888-279222,279918-280053,280149-280328,
280422-280679,280752-281137
Length = 1409
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -2
Query: 326 DGIVDFDKWVWIADGAAIMRYQVRTFLGPVATRLTLHNLYLASSGVI 186
D + D D +WIA A+ RY+ L PV R L LA +G+I
Sbjct: 366 DQLPDADLPIWIAAQRAVSRYE--GILSPVGPRGRLLRRLLAWTGLI 410
>05_05_0030 - 21698625-21698752,21699589-21699627,21699708-21699822,
21699927-21699992,21701064-21701203,21701424-21701473,
21701608-21702045,21702757-21702839,21702941-21702977,
21703366-21703457,21703531-21703615,21703950-21704029,
21704049-21704105,21704350-21704747,21706322-21707223,
21707331-21707421,21708123-21710273,21710375-21710813,
21711180-21711299
Length = 1836
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 472 TSRTPRDTPSPRVEQRVHNRQGHEGRTS 555
T TP TP P++E +H R H T+
Sbjct: 1538 TMPTPNSTPLPQLEGSIHARDVHANNTN 1565
>03_01_0408 + 3151984-3152666,3156061-3156368,3157594-3157946
Length = 447
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 421 WAPSCPARDIPAPSTLCTSRTPRDTPSPRVEQRVH 525
W P PA + A + ++RTP TPS + R H
Sbjct: 8 WGPPPPAGEKGAGAASTSARTPTPTPSTAGDPRRH 42
>02_02_0353 + 9276316-9276518,9276915-9277314
Length = 200
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 469 CTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRA 567
C S +PR +P+P + R+G GRT CRA
Sbjct: 170 CPSSSPRRSPAPPPGRACKGRRG--GRTRCCRA 200
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,480,746
Number of Sequences: 37544
Number of extensions: 592885
Number of successful extensions: 2000
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1992
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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