Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30553
(741 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 164 1e-40
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 164 1e-40
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 164 1e-40
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 164 1e-40
AY060288-1|AAL25327.1| 701|Drosophila melanogaster GH13047p pro... 31 2.2
AE014296-2593|AAF49569.3| 861|Drosophila melanogaster CG6114-PA... 31 2.2
AL133504-1|CAB65843.1| 632|Drosophila melanogaster EG:BACH7M4.1... 30 3.8
AE014298-395|AAF45778.1| 1529|Drosophila melanogaster CG14045-PA... 30 3.8
U09789-1|AAA18501.1| 737|Drosophila melanogaster cytoplasmic ba... 29 5.0
AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2 pr... 29 6.6
AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon prot... 29 6.6
AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB... 29 6.6
AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA... 29 6.6
AY069809-1|AAL39954.1| 855|Drosophila melanogaster SD04959p pro... 29 8.8
AF149047-1|AAF73149.1| 900|Drosophila melanogaster Su(z)12 prot... 29 8.8
AE014296-3247|AAF49094.2| 855|Drosophila melanogaster CG8013-PA... 29 8.8
AE014296-3246|AAN11641.1| 900|Drosophila melanogaster CG8013-PB... 29 8.8
AE014296-2946|AAF49313.1| 797|Drosophila melanogaster CG6064-PA... 29 8.8
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 164 bits (398), Expect = 1e-40
Identities = 75/111 (67%), Positives = 85/111 (76%)
Frame = +3
Query: 255 PYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIV 434
P+LVTHDGRTIRYPDPLI NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT+V
Sbjct: 137 PFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVV 196
Query: 435 SRERHPGSFDIVHIKDSTGHTFXXXXXXXXXXXXXXXXYISLPRGQRASAS 587
+RERHPGSFDIVHIKDS GH F YISLP+G+ S
Sbjct: 197 NRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLS 247
Score = 137 bits (332), Expect = 1e-32
Identities = 63/85 (74%), Positives = 71/85 (83%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LKYAL G EV KIV QRL+KV GKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF I
Sbjct: 52 LKYALNGAEVTKIVMQRLVKVYGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVI 111
Query: 181 HRITPEEAKYKLCKVKRVATGPKNV 255
HRI+ EEAKYKLCKVK+ G K V
Sbjct: 112 HRISAEEAKYKLCKVKKTQLGAKGV 136
Score = 41.5 bits (93), Expect = 0.001
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +2
Query: 509 LNNVFIIGKGTKGVHLAAARAKGIRLTIAEERDQ 610
L NVFIIGKG K +++ + KG++L+IAEERD+
Sbjct: 222 LTNVFIIGKGNKP-YISLPKGKGVKLSIAEERDK 254
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 164 bits (398), Expect = 1e-40
Identities = 75/111 (67%), Positives = 85/111 (76%)
Frame = +3
Query: 255 PYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIV 434
P+LVTHDGRTIRYPDPLI NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT+V
Sbjct: 137 PFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVV 196
Query: 435 SRERHPGSFDIVHIKDSTGHTFXXXXXXXXXXXXXXXXYISLPRGQRASAS 587
+RERHPGSFDIVHIKDS GH F YISLP+G+ S
Sbjct: 197 NRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLS 247
Score = 141 bits (341), Expect = 1e-33
Identities = 64/85 (75%), Positives = 72/85 (84%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LKYAL G EV KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF I
Sbjct: 52 LKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVI 111
Query: 181 HRITPEEAKYKLCKVKRVATGPKNV 255
HRI+ EEAKYKLCKVK+ G K V
Sbjct: 112 HRISAEEAKYKLCKVKKTQLGAKGV 136
Score = 41.5 bits (93), Expect = 0.001
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +2
Query: 509 LNNVFIIGKGTKGVHLAAARAKGIRLTIAEERDQ 610
L NVFIIGKG K +++ + KG++L+IAEERD+
Sbjct: 222 LTNVFIIGKGNKP-YISLPKGKGVKLSIAEERDK 254
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 164 bits (398), Expect = 1e-40
Identities = 75/111 (67%), Positives = 85/111 (76%)
Frame = +3
Query: 255 PYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIV 434
P+LVTHDGRTIRYPDPLI NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT+V
Sbjct: 137 PFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVV 196
Query: 435 SRERHPGSFDIVHIKDSTGHTFXXXXXXXXXXXXXXXXYISLPRGQRASAS 587
+RERHPGSFDIVHIKDS GH F YISLP+G+ S
Sbjct: 197 NRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLS 247
Score = 141 bits (341), Expect = 1e-33
Identities = 64/85 (75%), Positives = 72/85 (84%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LKYAL G EV KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF I
Sbjct: 52 LKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVI 111
Query: 181 HRITPEEAKYKLCKVKRVATGPKNV 255
HRI+ EEAKYKLCKVK+ G K V
Sbjct: 112 HRISAEEAKYKLCKVKKTQLGAKGV 136
Score = 41.5 bits (93), Expect = 0.001
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +2
Query: 509 LNNVFIIGKGTKGVHLAAARAKGIRLTIAEERDQ 610
L NVFIIGKG K +++ + KG++L+IAEERD+
Sbjct: 222 LTNVFIIGKGNKP-YISLPKGKGVKLSIAEERDK 254
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 164 bits (398), Expect = 1e-40
Identities = 75/111 (67%), Positives = 85/111 (76%)
Frame = +3
Query: 255 PYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIV 434
P+LVTHDGRTIRYPDPLI NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT+V
Sbjct: 137 PFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVV 196
Query: 435 SRERHPGSFDIVHIKDSTGHTFXXXXXXXXXXXXXXXXYISLPRGQRASAS 587
+RERHPGSFDIVHIKDS GH F YISLP+G+ S
Sbjct: 197 NRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLS 247
Score = 141 bits (341), Expect = 1e-33
Identities = 64/85 (75%), Positives = 72/85 (84%)
Frame = +1
Query: 1 LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTI 180
LKYAL G EV KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF I
Sbjct: 52 LKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVI 111
Query: 181 HRITPEEAKYKLCKVKRVATGPKNV 255
HRI+ EEAKYKLCKVK+ G K V
Sbjct: 112 HRISAEEAKYKLCKVKKTQLGAKGV 136
Score = 41.5 bits (93), Expect = 0.001
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +2
Query: 509 LNNVFIIGKGTKGVHLAAARAKGIRLTIAEERDQ 610
L NVFIIGKG K +++ + KG++L+IAEERD+
Sbjct: 222 LTNVFIIGKGNKP-YISLPKGKGVKLSIAEERDK 254
>AY060288-1|AAL25327.1| 701|Drosophila melanogaster GH13047p
protein.
Length = 701
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = +1
Query: 502 PRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGTGSSAFGAQSPPLQLRVNGNGT 666
PR+E+R RQ G + R R G PP G S + A SP + R N T
Sbjct: 337 PRIERRDSLRQERGGGSPRDRGDCGIPPGSPGGNSSGSTSA-SPSVHHRANSGPT 390
>AE014296-2593|AAF49569.3| 861|Drosophila melanogaster CG6114-PA
protein.
Length = 861
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = +1
Query: 502 PRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGTGSSAFGAQSPPLQLRVNGNGT 666
PR+E+R RQ G + R R G PP G S + A SP + R N T
Sbjct: 497 PRIERRDSLRQERGGGSPRDRGDCGIPPGSPGGNSSGSTSA-SPSVHHRANSGPT 550
>AL133504-1|CAB65843.1| 632|Drosophila melanogaster EG:BACH7M4.1
protein.
Length = 632
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +1
Query: 451 PAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEG 546
P P LCT+ P T SP QR N QGH G
Sbjct: 373 PQPP-LCTTSLPSRTNSPARNQRHPNGQGHVG 403
>AE014298-395|AAF45778.1| 1529|Drosophila melanogaster CG14045-PA
protein.
Length = 1529
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +1
Query: 451 PAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEG 546
P P LCT+ P T SP QR N QGH G
Sbjct: 1270 PQPP-LCTTSLPSRTNSPARNQRHPNGQGHVG 1300
>U09789-1|AAA18501.1| 737|Drosophila melanogaster cytoplasmic basic
protein protein.
Length = 737
Score = 29.5 bits (63), Expect = 5.0
Identities = 21/87 (24%), Positives = 34/87 (39%)
Frame = +2
Query: 284 HPLSRPTYQSQRFHPVRHCNYEDYGLHQV*VRELVYDHGRP*LGACGHHRVPRETSRLLR 463
HPL Q+ H ++H + H + H + HH++ +T+
Sbjct: 252 HPLPTSHQVQQQQHQLQHQQQQQQQHHH---QHQQQQHQQQQQHQMQHHQIHHQTAPRKP 308
Query: 464 HCAHQGLHGTHLRHELNNVFIIGKGTK 544
H + T+LR LNN+ I TK
Sbjct: 309 PKKHSEISTTNLRQILNNLNIFSSSTK 335
>AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2
protein.
Length = 1711
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = +1
Query: 436 PARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGTGSSA 615
P +P P+T R+ R TP+ R + ++++R+ + R + +R S
Sbjct: 1131 PPAPVPTPATSSPVRSRRLTPAARNQSQIYSRRLEFATSQRESSASALLGKRKRRVNPSV 1190
Query: 616 FGAQSPPLQLRVNGNGTF 669
G P Q + G G +
Sbjct: 1191 AGTVRPTTQ-NLPGTGAY 1207
>AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon protein.
Length = 1695
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = +1
Query: 436 PARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGTGSSA 615
P +P P+T R+ R TP+ R + ++++R+ + R + +R S
Sbjct: 1131 PPAPVPTPATSSPVRSRRLTPAARNQSQIYSRRLEFATSQRESSASALLGKRKRRVNPSV 1190
Query: 616 FGAQSPPLQLRVNGNGTF 669
G P Q + G G +
Sbjct: 1191 AGTVRPTTQ-NLPGTGAY 1207
>AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB,
isoform B protein.
Length = 1695
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = +1
Query: 436 PARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGTGSSA 615
P +P P+T R+ R TP+ R + ++++R+ + R + +R S
Sbjct: 1131 PPAPVPTPATSSPVRSRRLTPAARNQSQIYSRRLEFATSQRESSASALLGKRKRRVNPSV 1190
Query: 616 FGAQSPPLQLRVNGNGTF 669
G P Q + G G +
Sbjct: 1191 AGTVRPTTQ-NLPGTGAY 1207
>AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA,
isoform A protein.
Length = 1711
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = +1
Query: 436 PARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGTGSSA 615
P +P P+T R+ R TP+ R + ++++R+ + R + +R S
Sbjct: 1131 PPAPVPTPATSSPVRSRRLTPAARNQSQIYSRRLEFATSQRESSASALLGKRKRRVNPSV 1190
Query: 616 FGAQSPPLQLRVNGNGTF 669
G P Q + G G +
Sbjct: 1191 AGTVRPTTQ-NLPGTGAY 1207
>AY069809-1|AAL39954.1| 855|Drosophila melanogaster SD04959p
protein.
Length = 855
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 457 PSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGTGSSAFGAQSPP 636
P TL + + P P+ + + G +S + K P H +RG+ +S+ G QS
Sbjct: 682 PKTLKSPQKPAP-PADQASTSSASTSGSGSGSSSMQPPKRMPAHLKRGSAASSPGVQSKG 740
Query: 637 LQLRVNGNGT 666
+ NG+ +
Sbjct: 741 TENGTNGSNS 750
>AF149047-1|AAF73149.1| 900|Drosophila melanogaster Su(z)12
protein.
Length = 900
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 457 PSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGTGSSAFGAQSPP 636
P TL + + P P+ + + G +S + K P H +RG+ +S+ G QS
Sbjct: 682 PKTLKSPQKPAP-PADQASTSSASTSGSGSGSSSMQPPKRMPAHLKRGSAASSPGVQSKG 740
Query: 637 LQLRVNGNGT 666
+ NG+ +
Sbjct: 741 TENGTNGSNS 750
>AE014296-3247|AAF49094.2| 855|Drosophila melanogaster CG8013-PA,
isoform A protein.
Length = 855
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 457 PSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGTGSSAFGAQSPP 636
P TL + + P P+ + + G +S + K P H +RG+ +S+ G QS
Sbjct: 682 PKTLKSPQKPAP-PADQASTSSASTSGSGSGSSSMQPPKRMPAHLKRGSAASSPGVQSKG 740
Query: 637 LQLRVNGNGT 666
+ NG+ +
Sbjct: 741 TENGTNGSNS 750
>AE014296-3246|AAN11641.1| 900|Drosophila melanogaster CG8013-PB,
isoform B protein.
Length = 900
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 457 PSTLCTSRTPRDTPSPRVEQRVHNRQGHEGRTSRCRAGKGHPPHHRRGTGSSAFGAQSPP 636
P TL + + P P+ + + G +S + K P H +RG+ +S+ G QS
Sbjct: 682 PKTLKSPQKPAP-PADQASTSSASTSGSGSGSSSMQPPKRMPAHLKRGSAASSPGVQSKG 740
Query: 637 LQLRVNGNGT 666
+ NG+ +
Sbjct: 741 TENGTNGSNS 750
>AE014296-2946|AAF49313.1| 797|Drosophila melanogaster CG6064-PA
protein.
Length = 797
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Frame = +1
Query: 361 SSSLSPGTCV*SREAVTWGVWAP-SCPARDIPAPSTLCTSRTPRDTPSPRVEQRVHNRQG 537
+SS GT T V +P CP+ +P P + +P+ +Q+ + Q
Sbjct: 600 NSSSGGGTAQDPLGITTSPVPSPLGCPSSPLPIPIPMSAQSSPQQQHHHHQQQQQQHHQQ 659
Query: 538 HEGRTSRCRAGKGHPPHH 591
+ + H PHH
Sbjct: 660 QHHQQQQLSLSLHHSPHH 677
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,957,173
Number of Sequences: 53049
Number of extensions: 929780
Number of successful extensions: 3230
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3226
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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