Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30553
(741 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 28 0.11
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 25 0.75
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 25 0.75
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 24 1.7
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 23 4.0
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 23 4.0
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 5.3
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 5.3
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 5.3
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 7.0
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 9.2
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 27.9 bits (59), Expect = 0.11
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -1
Query: 204 SLLRGDTVDCESALNIID*TKQFISLLN*DNIHKSSRIS 88
SLL+ +TV C+ A++++ + +++ DNIH IS
Sbjct: 381 SLLKENTVTCQEAMHMLKNADSQLLVISDDNIHIKGVIS 419
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 25.0 bits (52), Expect = 0.75
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -1
Query: 285 WCGHHALPSTDILRSGRHTLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 127
W G L T + R G+ + T L+ ++L + CE +NI K ++SL
Sbjct: 63 WIGFGFL-MTFLRRYGQSAVGLTFLLGAILVQVAIICEGVMNIQKDNKSYLSL 114
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 0.75
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 442 RDIPAPSTLCTSRTPRDTPSP 504
RD+P ST T+ RDT +P
Sbjct: 137 RDLPGKSTTTTAEVKRDTINP 157
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 442 RDIPAPSTLCTSRTPRDTPSP 504
RD+P ST T RDT +P
Sbjct: 137 RDLPGKSTTTTVEVKRDTINP 157
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 22.6 bits (46), Expect = 4.0
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +2
Query: 440 RETSRLLRHCAHQGLHGTHLRHELNNVFIIGKGTKGVHLAAARAKGIRLTIAE 598
R +L GLHG H H L++ G AAA R +++E
Sbjct: 123 RRLEQLTNQTGLHGLHGLHGLHGLSSSAPTGSSCGPGAAAAAALLSKRRSVSE 175
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 22.6 bits (46), Expect = 4.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 732 NWGKGAPPNKGPN 694
NW KG P N PN
Sbjct: 342 NWIKGTPQNNVPN 354
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 476 DVHNVEGAGMSLAGHD 429
DVH V GAG + HD
Sbjct: 110 DVHGVIGAGHWIGDHD 125
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +1
Query: 571 KGHPPHHRRGTGSSAFGAQSPP 636
K P H GT ++A +PP
Sbjct: 34 KAETPEHLAGTSTTAAATPTPP 55
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 449 SRLLRHCAHQGLHGTHLRHELN 514
SRL+R C H + H+R L+
Sbjct: 145 SRLMR-CLHHDIENAHIRRTLH 165
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 738 GQNWGKGAPPNKGPNRGK 685
G+ GKG +G NRG+
Sbjct: 83 GRGHGKGGSRGRGGNRGR 100
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.4 bits (43), Expect = 9.2
Identities = 18/69 (26%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = -3
Query: 526 YEHVVQLVAKVCPVESLMCTMSK-EPGCLSRDTMVPTRPKLRPPVIIHKFPDSNLMKSII 350
Y V VC V M M + D+ P +P PP PDS + I
Sbjct: 303 YLKAVDAFMSVCTVFVFMALMEYCLVNIVLGDSDTPPKPAPPPPPPSSSGPDSAKLDKIF 362
Query: 349 FVVAMSNWM 323
+ N M
Sbjct: 363 DIATKENAM 371
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,900
Number of Sequences: 438
Number of extensions: 5047
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -