Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30552
(777 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0297 + 7196624-7196931,7198015-7198258,7198385-7198573,719... 55 5e-08
04_04_0033 + 22295974-22296290,22296441-22296684,22296797-222969... 53 2e-07
04_04_0034 + 22298636-22298952,22299057-22299300,22299395-222995... 53 3e-07
05_05_0085 - 22265143-22265226,22265294-22265602,22266915-222671... 51 9e-07
02_01_0179 - 1227573-1227803,1227916-1228138,1228159-1228185,122... 51 9e-07
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 51 1e-06
04_01_0350 - 4610444-4610668,4612181-4612969 50 2e-06
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977... 49 4e-06
10_01_0065 + 845447-846187,846969-847193 48 6e-06
10_01_0069 + 890634-890941,892146-892395,893146-893175,894956-89... 48 8e-06
10_01_0070 + 902999-903354,904354-904600,904718-904897,905087-90... 47 1e-05
10_01_0066 + 848523-849269,849520-849741 45 6e-05
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 44 2e-04
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 40 0.002
02_05_1228 + 35086576-35087139,35089125-35089268,35090436-350906... 38 0.007
01_06_1337 + 36404245-36404355,36404467-36404517,36405304-364053... 38 0.007
05_05_0084 - 22262007-22262300,22262435-22262707,22263418-222634... 38 0.012
03_05_0299 + 22887603-22887797,22887891-22887986,22888089-228881... 37 0.016
12_02_0351 - 17829874-17830005,17830250-17830267,17830544-178306... 35 0.063
03_05_0191 + 21800993-21801132,21801222-21801873 31 0.77
01_01_1126 + 8925685-8925745,8926178-8926343,8927135-8927585,892... 31 0.77
05_04_0060 + 17576427-17578781 31 1.0
07_01_0316 + 2226010-2226256,2226956-2227047,2227143-2227180,222... 30 2.4
12_02_0304 + 17112677-17113195 29 5.4
09_06_0325 + 22347286-22347574,22347770-22348054,22348508-223485... 28 7.2
07_01_0303 - 2171796-2172611,2173133-2174062,2174659-2175132,217... 28 7.2
05_04_0344 + 20442041-20442374,20443115-20443210,20444512-204446... 28 7.2
03_06_0301 - 32974276-32974638,32974842-32974967,32975056-329751... 28 7.2
03_02_0227 + 6576333-6577769 28 7.2
10_08_0870 - 21178136-21178534 28 9.5
01_06_0687 - 31249036-31249341 28 9.5
>03_02_0297 +
7196624-7196931,7198015-7198258,7198385-7198573,
7198650-7198874
Length = 321
Score = 55.2 bits (127), Expect = 5e-08
Identities = 39/89 (43%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Frame = +2
Query: 272 AVRASGIP-REDIFIVTKL-PMDNQRD-VVKQLEKSLARLNMSYVDLYLIHNPVAFNPG- 439
AVR+ I R D+FI +KL D RD V+ L ++L L M YVDLYL+H PV+ PG
Sbjct: 66 AVRSGAIASRADLFITSKLWCSDAHRDRVLPALRQTLWNLQMEYVDLYLVHWPVSMKPGR 125
Query: 440 ----FKGYDIV--DYLDTWKGMEEAKNLG 508
F D V D W+ MEE LG
Sbjct: 126 YKAPFTADDFVPFDMRAVWEAMEECHRLG 154
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 LAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNGI-VC*WRFSP 684
LAK+IG+ NF+ ++D +L I P+V QVEVN Q KL + C+ G+ +C +SP
Sbjct: 155 LAKAIGVCNFSCKKLDTLLSFATIPPAVNQVEVNPVWQQRKLRELCREKGVQIC--AYSP 212
Query: 685 FG 690
G
Sbjct: 213 LG 214
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 102 GNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALY 248
G +P +G+GT + + +P + V A+EAGYR DTAA Y
Sbjct: 12 GFGMPRVGMGTAV-------QGPRPEPIRRAVLKAIEAGYRHFDTAAHY 53
>04_04_0033 +
22295974-22296290,22296441-22296684,22296797-22296976,
22297749-22297979
Length = 323
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Frame = +2
Query: 296 REDIFIVTKLPMDNQRD--VVKQLEKSLARLNMSYVDLYLIHNPVAFNPG-----FKGYD 454
RE+ F+ TKL V+ L +SL L M YVDLYLIH P++ PG K D
Sbjct: 78 REEAFVTTKLWCTQCHPDLVLPSLRESLRNLQMEYVDLYLIHLPISVKPGPMVFPVKKED 137
Query: 455 IV--DYLDTWKGMEEAKNLG 508
+V D+ W+ MEE LG
Sbjct: 138 VVPFDFGGVWRAMEECHRLG 157
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/61 (44%), Positives = 36/61 (59%)
Frame = +1
Query: 508 LAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNGIVC*WRFSPF 687
LAK+IG+SNF T ID++L I P+V QVE+N Q + +YC GI +SP
Sbjct: 158 LAKAIGVSNFTTKHIDKLLAVATILPAVNQVEMNPTWQQRTVREYCDAKGIRV-TAYSPL 216
Query: 688 G 690
G
Sbjct: 217 G 217
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 99 DGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALY 248
D +PA+G+G + P + V ALEAG+R DTA+LY
Sbjct: 14 DARPMPAVGMGV-------AEYPSTPERTRDAVLAALEAGFRHFDTASLY 56
>04_04_0034 +
22298636-22298952,22299057-22299300,22299395-22299574,
22300819-22300842,22301055-22301285
Length = 331
Score = 52.8 bits (121), Expect = 3e-07
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Frame = +2
Query: 296 REDIFIVTKLPMDNQRD--VVKQLEKSLARLNMSYVDLYLIHNPVAFNPG-----FKGYD 454
RE++F+ TKL V+ L +SL L M YVDLYL+H P++ PG K D
Sbjct: 78 REEVFVTTKLWCTQCHPGLVLPSLRESLRNLQMEYVDLYLVHWPISVKPGPPMLPVKRED 137
Query: 455 IV--DYLDTWKGMEEAKNLG 508
V D+ W+ MEE LG
Sbjct: 138 AVPFDFEGVWRAMEECHRLG 157
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = +1
Query: 508 LAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNGIVC*WRFSPF 687
LAK+IG+SNF T +D++L I P+V QVE+N Q + +YC GI +SP
Sbjct: 158 LAKAIGVSNFTTKHLDKLLAVATIPPAVNQVEMNPVWQQRTVREYCAAKGIRV-AAYSPL 216
Query: 688 G 690
G
Sbjct: 217 G 217
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 81 PKISLNDG--NSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALY 248
P+++L G +PA+G+GT P ALE G+R DTAALY
Sbjct: 5 PEVALRHGAGRPMPAVGVGT------ADSAATSPETKRGAALAALEVGFRHFDTAALY 56
>05_05_0085 -
22265143-22265226,22265294-22265602,22266915-22267187,
22267413-22267500,22267620-22267696,22267791-22267841,
22267967-22268077
Length = 330
Score = 51.2 bits (117), Expect = 9e-07
Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Frame = +2
Query: 290 IPREDIFIVTKLPMDNQ--RDVVKQLEKSLARLNMSYVDLYLIHNPVAF--NPGFKGYDI 457
+ REDIFI +KL N DV L+ +L L YVDLYLIH PV GF G ++
Sbjct: 68 VKREDIFITSKLWCTNHAPEDVPVALDSTLQDLQTDYVDLYLIHWPVRMKKGAGFGGQNV 127
Query: 458 V--DYLDTWKGMEEAKNLG 508
+ D TW ME+ + G
Sbjct: 128 LPTDIPATWAAMEKLHDSG 146
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/60 (35%), Positives = 36/60 (60%)
Frame = +1
Query: 511 AKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNGIVC*WRFSPFG 690
A++IG+SNF++ +++ +L ++ P+V QVE + Q KL +C GI +SP G
Sbjct: 148 ARAIGVSNFSSKKLEDLLAVARVPPAVDQVECHPVWQQTKLRKFCTSKGIHL-SAYSPLG 206
Score = 35.5 bits (78), Expect = 0.047
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +3
Query: 93 LNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNK 257
LN G IP++GLGT+ + +PG V A++AGYR ID A Y N+
Sbjct: 7 LNTGAKIPSVGLGTW---------QAEPGVVGNAVYAAVKAGYRHIDCAQAYFNE 52
>02_01_0179 -
1227573-1227803,1227916-1228138,1228159-1228185,
1228519-1228651,1228748-1228865,1229357-1229451,
1229886-1230048
Length = 329
Score = 51.2 bits (117), Expect = 9e-07
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = +2
Query: 257 DQIGAAVRASGIPREDIFIVTKLPMDNQRDVVKQLEKSLARLNMSYVDLYLIHNPVA 427
D + A + + RED+FI TKL + VV+ + SL +L + Y+DLYLIH PVA
Sbjct: 65 DALAEAFQTGLVKREDLFITTKLWNSDHGHVVEACKDSLKKLRLDYLDLYLIHFPVA 121
Score = 31.9 bits (69), Expect = 0.58
Identities = 19/63 (30%), Positives = 36/63 (57%)
Frame = +1
Query: 475 LERHGGSKKSRLAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRN 654
L R G + S+L +S N++ L +IKP+V Q+E + + +D L+ +C+++
Sbjct: 163 LVRSIGIRGSQLLESN--HNYDIFLTRDCLAYAKIKPAVNQIETHPYFQRDCLVKFCQKH 220
Query: 655 GIV 663
GI+
Sbjct: 221 GIL 223
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 57 ATTGGGKAPKISLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDT 236
A G G ++L+ G+++P++GLG + D +++ + AL GYR D
Sbjct: 3 AAQGSGVPAALALSSGHTMPSVGLGVW-RMDSPAIRDL--------IHSALRIGYRHFDC 53
Query: 237 AALYLNK 257
AA Y N+
Sbjct: 54 AADYQNE 60
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +1
Query: 508 LAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNGI 660
LAK IG+SNF T ++ +L +I P+V QVE+N Q KL+++CK GI
Sbjct: 169 LAKMIGVSNFTTKKLQELLAFAKIPPAVNQVELNPVWQQKKLMEFCKAKGI 219
Score = 48.8 bits (111), Expect = 5e-06
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Frame = +2
Query: 266 GAAVRASGIPREDIFIVTKLPMDNQRD--VVKQLEKSLARLNMSYVDLYLIHNPVAFNP- 436
GAA R RE++F+ TK+ V+ L +SL L M YVD+YL+H P++ P
Sbjct: 79 GAARRGVIACREEVFVTTKVWCTQCHPDLVLPSLRESLQNLQMEYVDMYLVHWPMSVKPT 138
Query: 437 ----GFKGYDI--VDYLDTWKGMEEAKNLG 508
K DI +D W+ MEE LG
Sbjct: 139 KPHYPMKREDIMPMDLRGVWQAMEECHQLG 168
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 102 GNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALY 248
G ++PA+GLGT G++ + + ALE GYR IDTA++Y
Sbjct: 25 GRAVPAVGLGT-ASLRSVGEESFRGA-----LLAALEVGYRHIDTASVY 67
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 50.0 bits (114), Expect = 2e-06
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Frame = +2
Query: 263 IGAAVRASGIP-REDIFIVTKLPMDNQRD--VVKQLEKSLARLNMSYVDLYLIHNPVA-- 427
+ AVR + R ++F+ TKL M + VV L +SL+RL + YVDL+LIH PVA
Sbjct: 78 VAEAVRCGAVASRGELFVTTKLSMADAHPPRVVAALRESLSRLGLDYVDLFLIHWPVAIG 137
Query: 428 ---------FNPGFKGYDIVDYLDTWKGMEEAKNLG 508
++ +G D W+GMEE LG
Sbjct: 138 KKDAAGELTWDDLSRGLVPFDMEGVWRGMEECHRLG 173
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = +1
Query: 508 LAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNGIVC*WRFSPF 687
LA+SIG+SNF+ ++ R+L + P+V QVE+N+ Q+K+ + C G+V +SP
Sbjct: 174 LARSIGVSNFSAAKMSRLLALAAVPPAVNQVEMNVGWRQEKVREVCGEGGVVV-AAYSPL 232
Query: 688 G 690
G
Sbjct: 233 G 233
Score = 37.5 bits (83), Expect = 0.012
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +3
Query: 81 PKISLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALY 248
P ++LN G+++P LG GT P D + A+ GYR +DTAA+Y
Sbjct: 21 PCVTLNSGHAMPVLGFGT--------GSSTPPADLAATIAHAVRLGYRHLDTAAVY 68
>01_06_1336 +
36396904-36397014,36397141-36397191,36397681-36397757,
36397876-36397963,36398616-36398891,36399002-36399250,
36400315-36400398
Length = 311
Score = 49.2 bits (112), Expect = 4e-06
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Frame = +2
Query: 290 IPREDIFIVTKLPMDNQ--RDVVKQLEKSLARLNMSYVDLYLIHNPVAFNPGFKGYDIVD 463
+ RED+FI +KL D DV + L+K+L+ L + Y+DLYLIH P G + D
Sbjct: 68 VKREDLFITSKLWCDCHAPEDVPESLDKTLSDLQLEYLDLYLIHWPFRVKKGSGISNTED 127
Query: 464 YL-----DTWKGMEEAKNLG 508
Y+ TW ME+ + G
Sbjct: 128 YIPPDIPSTWGAMEKLYDSG 147
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/74 (33%), Positives = 42/74 (56%)
Frame = +1
Query: 469 GHLERHGGSKKSRLAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCK 648
G +E+ S KSR +IG+SNF++ ++ +L + P+V QVE + Q KL ++C+
Sbjct: 138 GAMEKLYDSGKSR---AIGVSNFSSKKLGDLLAVACVPPAVDQVECHPGWQQTKLHNFCQ 194
Query: 649 RNGIVC*WRFSPFG 690
G+ +SP G
Sbjct: 195 STGVHL-SAYSPLG 207
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +3
Query: 93 LNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNK 257
LN G IP++GLGT+ + PG V A++AGYR ID A +Y N+
Sbjct: 7 LNTGAKIPSVGLGTW---------QSDPGVVGDAVYAAVKAGYRHIDCARMYKNE 52
>10_01_0065 + 845447-846187,846969-847193
Length = 321
Score = 48.4 bits (110), Expect = 6e-06
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 LAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNGI-VC*WRFSP 684
LA++IG+SNF+ +++++L ++P+V QVEVN Q L + C+R G+ +C +SP
Sbjct: 158 LARAIGVSNFSAKKLEQLLSLAAVRPAVNQVEVNPMWQQRTLREVCRREGVQLC--GYSP 215
Query: 685 FG 690
G
Sbjct: 216 LG 217
Score = 45.2 bits (102), Expect = 6e-05
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Frame = +2
Query: 257 DQIGAAVRASGIP-REDIFIVTKLPMDNQRD--VVKQLEKSLARLNMSYVDLYLIHNPVA 427
+ + AVR I R D+F+ +K+ + VV ++L L M YVDL L+H PV+
Sbjct: 63 EAVAEAVRRGLIASRADVFVTSKIWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPVS 122
Query: 428 FNPGFKGY----DIV----DYLDTWKGMEEAKNLG 508
PG + +++ D W+GMEE LG
Sbjct: 123 LTPGNYDFPFPKEVILPSFDMEGVWRGMEECHRLG 157
>10_01_0069 +
890634-890941,892146-892395,893146-893175,894956-895135,
895418-895669
Length = 339
Score = 48.0 bits (109), Expect = 8e-06
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Frame = +2
Query: 257 DQIGAAVRASGIP-REDIFIVTKLPMDNQRD--VVKQLEKSLARLNMSYVDLYLIHNPV- 424
D + AVRA + R++++I +KL + + V+ L ++L ++ M Y+DLYLIH PV
Sbjct: 61 DAVAEAVRAGLVASRDELYITSKLWVAHAHPGHVLPSLRRALRKMQMEYLDLYLIHFPVS 120
Query: 425 ---AFNPGFKGY---DIV--DYLDTWKGMEEAKNLG 508
A +P Y D+V D WK MEE + LG
Sbjct: 121 MRLAEDPESMTYSKDDLVMMDMEGVWKEMEECQRLG 156
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 11/72 (15%)
Frame = +1
Query: 508 LAKSIGISNFNTTQIDRILENGQIKPS----------VLQVEVNLHLGQDKLIDYCKRNG 657
L K+IG+SNF+ +++ +L I P+ +++VEV+ + Q+KL ++CK G
Sbjct: 157 LTKAIGVSNFSCKKLETLLSFATISPAANQLKVRLFQIVEVEVHPYCRQNKLREFCKEKG 216
Query: 658 I-VC*WRFSPFG 690
I +C +SP G
Sbjct: 217 IQLC--AYSPLG 226
Score = 34.7 bits (76), Expect = 0.083
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +3
Query: 81 PKISLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALY 248
P+ +L+ G +P +G+GT F G + P + V A+EAGYR DTAA+Y
Sbjct: 2 PEAALSSGKPMPRVGMGT-ASFP-LGATD--PSTVKDVVLRAIEAGYRHFDTAAVY 53
>10_01_0070 +
902999-903354,904354-904600,904718-904897,905087-905332
Length = 342
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 LAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNGI-VC*WRFSP 684
L K+IG+SNF +++ +L I P+ QVE+N + Q+KL ++CK I +C +SP
Sbjct: 172 LTKAIGVSNFTCKKLNTLLSFATIPPAANQVEINPYCRQNKLREFCKEKEIQLC--AYSP 229
Query: 685 FG 690
G
Sbjct: 230 LG 231
Score = 46.4 bits (105), Expect = 3e-05
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
Frame = +2
Query: 272 AVRASGIP-REDIFIVTKLPMDNQRD--VVKQLEKSLARLNMSYVDLYLIHNPVAF---- 430
AVRA + R+D++I +KL + + V+ L ++L L M Y+DLYLIH P+
Sbjct: 82 AVRAGMVASRDDLYITSKLWISDTHPGRVLPALRRTLRNLQMVYIDLYLIHWPIRLRVEQ 141
Query: 431 ---NPGF-KGYDIVDYLDTWKGMEEAKNLG 508
+P + + ++D WK MEE + LG
Sbjct: 142 ETPSPVYDNDFVMMDMEGVWKDMEECQRLG 171
Score = 35.5 bits (78), Expect = 0.047
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +3
Query: 45 GISEATTGGGKAPKISLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYR 224
G+ + P+ +L G +P +G+GT F + P V A++AGYR
Sbjct: 5 GVGASAAAAATIPEAALRSGKPMPLVGMGT-ASFPLDAPQ--LPATVRDAVLRAIDAGYR 61
Query: 225 LIDTAALY 248
DTAA Y
Sbjct: 62 HFDTAAAY 69
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/62 (35%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 LAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNGI-VC*WRFSP 684
LA++IG+SNF+ +++++L ++P+ QVE+N Q L + C+R G+ +C +SP
Sbjct: 160 LARAIGVSNFSAKKLEQLLSFAVVRPAANQVEMNPMWQQRTLREVCRREGVQLC--GYSP 217
Query: 685 FG 690
G
Sbjct: 218 LG 219
Score = 43.2 bits (97), Expect = 2e-04
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Frame = +2
Query: 236 GCIVFK*DQIGAAVRASGIP-REDIFIVTKLPMDNQRD--VVKQLEKSLARLNMSYVDLY 406
GC+ + + AVR + R D+F+ +KL + VV ++L L M YVDL
Sbjct: 61 GCVS---EAVAEAVRRGLVASRADVFVTSKLWCSDLHAGRVVPAARETLRNLGMDYVDLL 117
Query: 407 LIHNPVAFNPG-----FKGYDIVDYLD---TWKGMEEAKNLG 508
L+H P PG F ++ D W+GMEE LG
Sbjct: 118 LVHWPATVAPGSYDFPFPKEEMAPAFDMEGVWRGMEECHRLG 159
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Frame = +2
Query: 290 IPREDIFIVTKLPMDN--QRDVVKQLEKSLARLNMSYVDLYLIHNPVAFNPGF----KGY 451
+ RED+FI +K+ + DV ++ +L L + YVDLYLIH P G + +
Sbjct: 69 VKREDLFITSKIWCSDLAPEDVPLAMDSTLKDLQLDYVDLYLIHWPFQIKKGTELSPENF 128
Query: 452 DIVDYLDTWKGMEEAKNLG 508
D TW+ ME+ + G
Sbjct: 129 VKPDIPSTWRAMEQLYDSG 147
Score = 36.3 bits (80), Expect = 0.027
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +1
Query: 511 AKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNGIVC*WRFSPFG 690
A++IG+SNF++ ++ +L ++ P+V QVE + Q KL +C +G+ ++P G
Sbjct: 149 ARAIGVSNFSSKKLGDLLCVARVPPAVDQVECHPGWQQAKLRAFCHTSGVHL-SAYAPLG 207
Query: 691 PM 696
M
Sbjct: 208 RM 209
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/60 (38%), Positives = 31/60 (51%)
Frame = +3
Query: 78 APKISLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNK 257
A +LN G IP++GLGT+ + G V A++AGYR ID A LY N+
Sbjct: 2 ATHFTLNTGARIPSVGLGTY---------KAGTGVVADVVSAAVKAGYRHIDCAPLYKNE 52
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/61 (32%), Positives = 38/61 (62%)
Frame = +1
Query: 508 LAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNGIVC*WRFSPF 687
L K IG+ NF+ T+++R+L++ I P+ +E++ +K+ + CK++GI +SP
Sbjct: 201 LVKDIGVCNFSVTKLNRLLQSANIPPA---MEMHPGWKNNKIFEACKKHGIHV-TAYSPL 256
Query: 688 G 690
G
Sbjct: 257 G 257
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 272 AVRASGIPREDIFIVTKLPMDN--QRDVVKQLEKSLARLNMSYVDLYLIHNPVAFNPG 439
A +GI R+D+F+ +K+ N V L+ +L L + Y+DLYLIH P G
Sbjct: 114 AAMEAGINRKDLFVTSKIWCTNLAPERVRPALKNTLKDLQLDYIDLYLIHWPFRLKDG 171
>02_05_1228 +
35086576-35087139,35089125-35089268,35090436-35090600,
35090722-35090796,35091468-35091671
Length = 383
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Frame = +2
Query: 263 IGAAVRASGIPREDIFIVTKL------PMD---NQRDVVKQLEKSLARLNMSYVDLYLIH 415
+G A+R G R D+ + TKL P D +++ +V+ L SL RL+M YVD+ H
Sbjct: 63 MGQAMRDLGWRRSDVVVSTKLFWGGQGPNDKGLSRKHIVEGLRGSLKRLDMDYVDVVYCH 122
Query: 416 NPVAFNP 436
P A P
Sbjct: 123 RPDATTP 129
>01_06_1337 +
36404245-36404355,36404467-36404517,36405304-36405337,
36405428-36405485,36405499-36405586,36406110-36406385,
36406505-36406753,36407558-36407641
Length = 316
Score = 38.3 bits (85), Expect = 0.007
Identities = 20/60 (33%), Positives = 37/60 (61%)
Frame = +1
Query: 511 AKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNGIVC*WRFSPFG 690
+++IG+SNF++ ++ +L ++ P+V QVE + Q KL ++C+ GI +SP G
Sbjct: 154 SRAIGVSNFSSKKLGDLLAAARVPPAVDQVECHPGWQQMKLHNFCQSTGIHL-SAYSPLG 212
Score = 33.5 bits (73), Expect = 0.19
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +3
Query: 93 LNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNK 257
LN G IP++GLGT+ + PG V A++AGYR ID A+ Y N+
Sbjct: 7 LNTGAKIPSVGLGTW---------QSDPGVVGNAVYAAVKAGYRHIDCASAYNNE 52
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +2
Query: 344 DVVKQLEKSLARLNMSYVDLYLIHNPVAFNPGF-----KGYDIVDYLDTWKGMEEAKNLG 508
DV + L+ +L L + Y+DLYLIH P G + Y D TW ME+ + G
Sbjct: 93 DVPEALDATLNDLQLEYLDLYLIHWPFRTKKGSSIGKPESYLPPDIPSTWAAMEKLYDSG 152
>05_05_0084 -
22262007-22262300,22262435-22262707,22263418-22263468,
22263944-22264035,22264715-22264724
Length = 239
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +1
Query: 511 AKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNGI 660
A++IG+SNF+ +++ +L ++ P+V QVE + Q KL C+ G+
Sbjct: 90 ARAIGVSNFSCKKLEDLLNVARVPPAVNQVECHPVWQQGKLRKLCQSKGV 139
>03_05_0299 +
22887603-22887797,22887891-22887986,22888089-22888172,
22888573-22888733,22889458-22889575,22889914-22890049,
22890351-22890529,22890690-22890929
Length = 402
Score = 37.1 bits (82), Expect = 0.016
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 257 DQIGAAVRASGIPREDIFIV--TKLPMDNQRDVVKQLEKSLARLNMSYVDLYLIHNPVAF 430
D+I A + SG F+ K+ + ++ + +EKSL+RL+ Y+DL IH P +
Sbjct: 124 DKIILATKVSGYSERSTFLRDNAKVVRVDAANIKESVEKSLSRLSTDYIDLLQIHWPDRY 183
Query: 431 NPGFKGY 451
P F Y
Sbjct: 184 VPLFGEY 190
>12_02_0351 -
17829874-17830005,17830250-17830267,17830544-17830672,
17831037-17831336,17831447-17831675,17831762-17831989,
17832380-17832645
Length = 433
Score = 35.1 bits (77), Expect = 0.063
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Frame = +2
Query: 263 IGAAVRASGIPREDIFIVTKLPMDNQ------RDVVKQLEKSLARLNMSYVDLYLIHN 418
+G +RA+G+PR+ + TK + V + +++SLARL + YVD+ H+
Sbjct: 176 LGDCLRAAGVPRDRFVVATKCGRYREGFDFSAARVTRSVDESLARLGLDYVDILHCHD 233
>03_05_0191 + 21800993-21801132,21801222-21801873
Length = 263
Score = 31.5 bits (68), Expect = 0.77
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +2
Query: 713 TLQYGPERPHARGPFAEKTP 772
++ YGP+RP GPF+E+TP
Sbjct: 45 SIWYGPDRPKYLGPFSEQTP 64
>01_01_1126 +
8925685-8925745,8926178-8926343,8927135-8927585,
8927832-8927900,8928067-8928110,8928211-8928355
Length = 311
Score = 31.5 bits (68), Expect = 0.77
Identities = 25/98 (25%), Positives = 45/98 (45%)
Frame = +1
Query: 322 ATNGQSERRGETIGEVFGEIEHELRRSVLDTQSSCF*SWIQRLRHCRLLGHLERHGGSKK 501
A+NG+ E R T+ E+ +E+E+ + T W +R L + + SK+
Sbjct: 116 ASNGELEER--TLSEILKNLENEVPNMKIFTYRRL--DWSKRAASLATLMNDDFVDPSKE 171
Query: 502 SRLAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLH 615
L + +TT ID++ + PS+ + V+LH
Sbjct: 172 LNLQNMSKSGSGDTTPIDQVAIIELLAPSIFRAIVSLH 209
>05_04_0060 + 17576427-17578781
Length = 784
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3
Query: 763 FGKWPTSVGSFGAVLKGEAVVETSGQTG 680
F K P ++G+FGA+ KG AVV G +G
Sbjct: 301 FDKDPIAIGAFGAMSKGIAVVCAGGNSG 328
>07_01_0316 +
2226010-2226256,2226956-2227047,2227143-2227180,
2227289-2227450,2227540-2227562,2227673-2227744,
2227858-2228025,2228318-2228400,2228533-2228595,
2228735-2228917
Length = 376
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Frame = +2
Query: 302 DIFIVTK---LPMDNQR-DVVKQLEKSLARLNMSYVDLYLIHNPVAFNPGFKGY 451
D+ + TK LP R V+ L+KSL RL +S V+LY +H P + G +GY
Sbjct: 138 DVAVATKFAALPWRFGRGSVLSALKKSLDRLGLSSVELYQLHWPGLW--GNEGY 189
>12_02_0304 + 17112677-17113195
Length = 172
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 145 NPRKVPRPKAGIELPSFSEIFGALPPPVVASEIPI 41
+PR+ P P E P+ + + PPPVVA P+
Sbjct: 41 SPRRAPSPSVTAE-PTPAPVIAPSPPPVVAPSQPL 74
>09_06_0325 +
22347286-22347574,22347770-22348054,22348508-22348592,
22348686-22348802,22349270-22349334,22349456-22349544,
22349642-22349721,22349797-22349908,22349990-22350109,
22350234-22350416
Length = 474
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 496 KKSRLAKSIGISNFNTTQIDRILENG-QIKPSVLQVEVNLHLGQDKLIDYCKRNGI 660
K+ K++ ++NF+T ++ ILENG I + +Q + Q ++ + C+ G+
Sbjct: 278 KEEGKIKTVALTNFDTDRLQIILENGIPIVSNQVQHSIVDMRPQRRMAELCQLTGV 333
>07_01_0303 -
2171796-2172611,2173133-2174062,2174659-2175132,
2175569-2175609,2176298-2176337
Length = 766
Score = 28.3 bits (60), Expect = 7.2
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 6/141 (4%)
Frame = -3
Query: 442 ESRIKSNWIVYQVQIDVAHVQSRQRLLQLFHHVSL-IVHW*LSHDEDVLSRNARGADGRS 266
E + SN ++ V +D R+ +L L H+S I+H+ L++ N++G
Sbjct: 473 EKAVVSNELLMLV-LDSVEELKRKLVLGLDSHISARILHFGLANPSVCRLWNSKGKVTMR 531
Query: 265 YLILFKYNAAVSINLYPASKAHLTGFSESPGLTSFCPFSSNPRKVPRPKAGIELPSF--S 92
L + A +SIN++ ++ L + P + + P P P + LP+
Sbjct: 532 SLFYVTFLAILSINVHSSACLRLLAETPLPVIPNGQP--GAPAPPPPANIPVNLPANVPP 589
Query: 91 EIFGALP---PPVVASEIPIN 38
E+ LP PP + + +P N
Sbjct: 590 EMPANLPANVPPEMLASLPAN 610
>05_04_0344 +
20442041-20442374,20443115-20443210,20444512-20444633,
20444781-20445029,20445300-20445549,20446036-20446262
Length = 425
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 323 LPMDNQ-RDVVKQLEKSLARLNMSYVDLYLIHNPVAFNPGFKGYDIVD 463
+P +++ + +V L +L R +VD Y + + V NP G+ +VD
Sbjct: 309 IPFNSKVKSMVNTLNVNLPRAKFIFVDTYAMISEVLRNPWSYGFSVVD 356
>03_06_0301 -
32974276-32974638,32974842-32974967,32975056-32975131,
32975935-32976130,32976666-32976759,32977773-32978195
Length = 425
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 672 AFFPVWPDVSTTASPFNTAPNDPTLVGHLP 761
A FP D+S+ + PFN++P++ T +P
Sbjct: 321 ALFPAASDMSSLSMPFNSSPSEATSDAAVP 350
>03_02_0227 + 6576333-6577769
Length = 478
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +3
Query: 51 SEATTGGGKAPKISLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWAL 209
S+ +GGGK+ +LND S +G + G + G K W L
Sbjct: 154 SQLASGGGKSDFTALNDATSFEFIG-EAYFGVRPSASSSLGTGGPTKAALWLL 205
>10_08_0870 - 21178136-21178534
Length = 132
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 539 LKLDMPIDLASLDFLLPPCLSRCPSNLQC 453
+KL++PIDL+ +L C CPS+ QC
Sbjct: 105 IKLNLPIDLS---LILNNCGKICPSDYQC 130
>01_06_0687 - 31249036-31249341
Length = 101
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 129 GTFLGFDEKGQKEVKPGDSEKPVKWALE 212
GT G D++G + KP + V W +E
Sbjct: 25 GTLAGVDKRGARMTKPSATSSGVAWTME 52
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,235,047
Number of Sequences: 37544
Number of extensions: 481649
Number of successful extensions: 1484
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1468
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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