Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30552
(777 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 54 1e-07
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 48 6e-06
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 46 3e-05
SB_4480| Best HMM Match : TAT_ubiq (HMM E-Value=8.2) 32 0.60
SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_3196| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_57427| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00044) 29 5.5
SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16) 28 7.3
SB_49185| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048) 28 7.3
SB_1933| Best HMM Match : PI3_PI4_kinase (HMM E-Value=4.06377e-44) 28 9.7
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 55.2 bits (127), Expect = 6e-08
Identities = 24/56 (42%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 QIGAAVRASGIPREDIFIVTKL--PMDNQRDVVKQLEKSLARLNMSYVDLYLIHNP 421
++G+AVR SG+ REDI++ TKL + + +K ++S+ +L++ YVDL+LIH P
Sbjct: 72 EVGSAVRKSGLKREDIYVTTKLKPSEEGHSNALKYAKESIKKLDIGYVDLFLIHTP 127
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/55 (32%), Positives = 35/55 (63%)
Frame = +1
Query: 496 KKSRLAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNGI 660
K+ L +S+G+SNF ++ + + G P++ Q+E+N Q+++I YC ++GI
Sbjct: 143 KEEGLIRSVGVSNFGVHHLEELRKAGCRTPAINQIEINPFWRQEEIIKYCNKHGI 197
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Frame = +2
Query: 263 IGAAVRASGIPREDIFIVTKLPMDNQ--RDVVKQLEKSLARLNMSYVDLYLIHNPV 424
+G AVR S IPR +I++VTK+ ++ + KSL RL + YVDLYLIH PV
Sbjct: 115 VGEAVRCSNIPRCEIYVVTKVYFTEHGYKETMDAFYKSLTRLGLGYVDLYLIHFPV 170
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +1
Query: 508 LAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNGIVC*WRFSP 684
L +SIG+SNFN ++ + + + P+V Q+EV+ L +L YCKR+ I FSP
Sbjct: 189 LIRSIGVSNFNIQHLEALRQQTGVVPAVNQIEVHPFLQMKELTQYCKRHNITI-QAFSP 246
Score = 41.9 bits (94), Expect = 6e-04
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = +3
Query: 93 LNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNK 257
+NDG IP LGLG ++ S++ V WALE+GYRLIDTA+ Y N+
Sbjct: 70 MNDGRKIPLLGLGAH---------DIH---SKQAVLWALESGYRLIDTASRYHNE 112
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Frame = +2
Query: 260 QIGAAVRASGIPREDIFIVTKLPMD--NQRDVVKQLEKSLARLNMSYVDLYLIHNPVAFN 433
Q+ A+ SGIPR+DIFI+TKL +K +E SL L+ Y+DL+LIH+ +
Sbjct: 378 QVAKAIADSGIPRKDIFIITKLHPRYLGYEPTLKSVEMSLRALSTDYIDLFLIHSKTCDD 437
Query: 434 ---PGFKGYDIVDYLDTWKGMEEAKNLG 508
+G + ++WK MEE G
Sbjct: 438 FLLTCAEGEPRGTWKESWKAMEELHRQG 465
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +3
Query: 180 DSEKPVKWALEAGYRLIDTAALY 248
D+ VK ALE GYRLIDTA Y
Sbjct: 350 DTLSVVKTALETGYRLIDTAQGY 372
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 50.4 bits (115), Expect = 2e-06
Identities = 28/63 (44%), Positives = 39/63 (61%)
Frame = +1
Query: 508 LAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNGIVC*WRFSPF 687
L K+IG+SNFN+ Q+D I +IKP QVE + L Q KLID+ K++ I +SP
Sbjct: 151 LVKAIGLSNFNSKQVDDICAIARIKPVANQVECHPLLNQAKLIDHHKKHNIQT-IAYSPL 209
Query: 688 GPM 696
G +
Sbjct: 210 GSL 212
Score = 48.8 bits (111), Expect = 5e-06
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Frame = +2
Query: 260 QIGAAVR---ASGIPREDIFIVTKL--PMDNQRDVVKQLEKSLARLNMSYVDLYLIHNPV 424
++G A+R S + R+D+FI +KL N +DV SL L + Y+DLYLIH P+
Sbjct: 53 EVGDALRELLGSVVERKDLFITSKLWNTKHNPKDVRSNCVDSLKDLGLDYLDLYLIHWPL 112
Query: 425 AFNPGFKG----------YDIVDYLDTWKGMEEAKNLG 508
+F G + Y D DTWK ME+ + G
Sbjct: 113 SFRDGDEFFPKDEQGNVLYAYHDPCDTWKAMEKLVDEG 150
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/57 (42%), Positives = 33/57 (57%)
Frame = +3
Query: 87 ISLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNK 257
+ LN+G +P LGLGT+ + KPG E VK+A++ GYR ID A Y N+
Sbjct: 4 VKLNNGLEMPVLGLGTW---------KSKPGQVENAVKFAIKEGYRHIDCAYAYRNE 51
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 48.4 bits (110), Expect = 6e-06
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 12/79 (15%)
Frame = +2
Query: 290 IPREDIFIVTKLPMDNQR--DVVKQLEKSLARLNMSYVDLYLIHNPVAFNPGFK------ 445
+ RE++F+ +KL D+ DV+ + +L L + Y+DLYLIH PVAF G +
Sbjct: 107 VKREELFVTSKLWCDSHHPDDVLPACQATLKNLQLDYLDLYLIHIPVAFKKGVRLPHSIA 166
Query: 446 ----GYDIVDYLDTWKGME 490
GY +TW+ ME
Sbjct: 167 EGIIGYTPEGVQNTWQAME 185
Score = 48.4 bits (110), Expect = 6e-06
Identities = 20/50 (40%), Positives = 35/50 (70%)
Frame = +1
Query: 508 LAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNG 657
L K+IG+SNF+ +++++LE I P+ QVE++ +L Q+KL ++C G
Sbjct: 192 LCKAIGVSNFSVKRLNKLLETASIVPACNQVELHPYLPQEKLKEFCDSKG 241
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 46.4 bits (105), Expect = 3e-05
Identities = 28/58 (48%), Positives = 34/58 (58%)
Frame = +3
Query: 90 SLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNKIR 263
+L+DG IP GLG + DEK K+ V WALE GYR+IDTAA Y N+ R
Sbjct: 2 TLSDGYKIPRFGLGLY-DLDEKHTKQA--------VLWALENGYRMIDTAASYNNEKR 50
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/43 (30%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 260 QIGAAVRASGIPREDIFIVTKLPMDNQ--RDVVKQLEKSLARL 382
++G A+R S +PR ++++VTK+ + +K ++SL+ L
Sbjct: 50 RVGEALRESAVPRSEVYLVTKVYHTDHGYEKTMKAYDRSLSAL 92
>SB_4480| Best HMM Match : TAT_ubiq (HMM E-Value=8.2)
Length = 107
Score = 31.9 bits (69), Expect = 0.60
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 469 GHLERHGGSKKSRLAKSIGISNFNTTQIDRILENGQIK 582
G LE H G +SR + S G+ F+ I+RIL++ I+
Sbjct: 1 GELELHRGGGRSRTSGSPGLQEFDDEDINRILKHVNIR 38
>SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2839
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 138 LGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALY-LNKIR*ERPSAPLAFRERTSSS 314
L +DEK +KEVKP D +K +K E A L ++R ER A RE +
Sbjct: 2363 LSYDEKIKKEVKPLDVQKIIKQRQEEQRESQRRARLLEEQRLREEREEMERARRELEEKN 2422
Query: 315 *LSYQWTIRETW*NNWRSLWRD 380
L+ + + + N R++ D
Sbjct: 2423 RLAERENLNMEYSENERAMESD 2444
>SB_3196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 481 FPGVQVIYNVVTFESRIKSNWIVY 410
FP Q IY+V++F+ R +SN+ +Y
Sbjct: 41 FPATQGIYDVLSFQERDESNYKIY 64
>SB_57427| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00044)
Length = 1693
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 157 PFSSNPRKVPRPKAGIELPSFSEIFGALPPP 65
P +S+ R++P P+ P EI +PPP
Sbjct: 788 PKTSDKREIPTPEMARSFPHLREIAAHIPPP 818
>SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16)
Length = 195
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +2
Query: 314 VTKLPMDNQRDVVKQL--EKSLARLNMSYVDLYLIH 415
++K+ +N ++ L EKSL RL + +DLYL+H
Sbjct: 31 LSKVRPENASEMKMMLSCEKSLERLGIDRIDLYLLH 66
>SB_49185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 657 HSLLMAFFPVWPDVSTTASPFNTAPNDPTLV 749
H LL +P+ P V ASP+ ++P + L+
Sbjct: 56 HDLLNNSYPIIPKVGEPASPYVSSPRESVLI 86
>SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048)
Length = 1952
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 657 HSLLMAFFPVWPDVSTTASPFNTAPNDPTLV 749
H LL +P+ P V ASP+ ++P + L+
Sbjct: 1637 HDLLNNSYPIIPKVGEPASPYVSSPRESVLI 1667
>SB_1933| Best HMM Match : PI3_PI4_kinase (HMM E-Value=4.06377e-44)
Length = 915
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 370 FGEIEHELRRSVLDTQSSCF*SWIQRLRHCRLLGHLERHGGSKKSR 507
F E E RR+V + +SC + + ++LGH + G K+ R
Sbjct: 278 FNPDEKEYRRAVENFTASCAAVTVFHIDFSKILGHAQMFGNFKRDR 323
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,284,896
Number of Sequences: 59808
Number of extensions: 527808
Number of successful extensions: 1561
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1555
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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