Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30551
(678 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 138 1e-31
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 136 5e-31
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 129 7e-29
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 128 9e-29
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 91 2e-17
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 88 2e-16
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 88 2e-16
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 79 1e-13
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 78 2e-13
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 77 5e-13
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 75 1e-12
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 71 3e-11
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 63 7e-09
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 61 3e-08
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 60 4e-08
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 54 4e-06
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 50 5e-05
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 48 2e-04
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 44 0.003
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 44 0.003
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 42 0.014
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 39 0.13
UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3; Euryarc... 38 0.30
UniRef50_Q9HPE9 Cluster: 30S ribosomal protein S8e; n=5; Halobac... 37 0.52
UniRef50_A1YJC5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3; Desulfu... 35 1.6
UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4; Archaea... 34 2.8
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 34 3.7
UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:... 33 6.4
UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5; Methano... 33 6.4
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 8.4
UniRef50_Q0D4A4 Cluster: Os07g0638000 protein; n=4; Oryza sativa... 33 8.4
UniRef50_Q5CW62 Cluster: FH2 domain containing protein; n=2; Cry... 33 8.4
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 138 bits (334), Expect = 1e-31
Identities = 81/171 (47%), Positives = 104/171 (60%), Gaps = 7/171 (4%)
Frame = +3
Query: 36 HWHKAKGPTGGKRAPHTQEEEV*VRASRCKHQARSSAYALRSFTWWKY*VPCAASGHR*L 215
+WHK + TGGKR P+ ++ R A ++ R + V +R L
Sbjct: 7 NWHKRR-KTGGKRKPYHKK-----RKYELGRPAANTKIGPRRIHTVR--VRGGNKKYRAL 58
Query: 216 LLGIGMFN-------SQNPYIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYT 374
L +G F+ + IDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY
Sbjct: 59 RLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYA 118
Query: 375 LPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALESNSTRG 527
LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LE +G
Sbjct: 119 LPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQG 169
Score = 113 bits (273), Expect = 3e-24
Identities = 49/64 (76%), Positives = 56/64 (87%)
Frame = +1
Query: 67 GNVRPIRKKRKYELGRPAANTRLGPQRMHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 246
G +P KKRKYELGRPAANT++GP+R+H+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 247 TRIL 258
TRI+
Sbjct: 76 TRII 79
Score = 86.2 bits (204), Expect = 6e-16
Identities = 36/45 (80%), Positives = 42/45 (93%)
Frame = +2
Query: 509 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 643
EQF G+LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 164 EQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 136 bits (329), Expect = 5e-31
Identities = 63/91 (69%), Positives = 74/91 (81%)
Frame = +3
Query: 255 IDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIIN 434
IDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+N
Sbjct: 59 IDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILN 118
Query: 435 KKRSQKTARKYLARQRLAKVEGALESNSTRG 527
KKRS+K +KY R++ AK+ LE +G
Sbjct: 119 KKRSKKIQKKYDERKKNAKISSLLEEQFQQG 149
Score = 86.2 bits (204), Expect = 6e-16
Identities = 36/45 (80%), Positives = 42/45 (93%)
Frame = +2
Query: 509 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 643
EQF G+LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 144 EQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 188
Score = 62.5 bits (145), Expect = 9e-09
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +1
Query: 67 GNVRPIRKKRKYELGRPAANTRLGPQRMHSVRSRGGNTK 183
G +P KKRKYELGRPAANT++GP+R+H+VR RGG T+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGCTR 54
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 129 bits (311), Expect = 7e-29
Identities = 61/92 (66%), Positives = 72/92 (78%), Gaps = 2/92 (2%)
Frame = +3
Query: 258 DVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--II 431
DVVYNASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPLGRK+ K + E+ ++
Sbjct: 80 DVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVL 139
Query: 432 NKKRSQKTARKYLARQRLAKVEGALESNSTRG 527
KKRS+K +KYL RQ+ KVE ALE T G
Sbjct: 140 TKKRSEKVMKKYLERQKYGKVEQALEDQFTSG 171
Score = 97.5 bits (232), Expect = 3e-19
Identities = 44/63 (69%), Positives = 52/63 (82%)
Frame = +1
Query: 67 GNVRPIRKKRKYELGRPAANTRLGPQRMHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 246
G + +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL+TGNF+W SE RK
Sbjct: 16 GKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFAWASEGVARK 75
Query: 247 TRI 255
TRI
Sbjct: 76 TRI 78
Score = 82.6 bits (195), Expect = 8e-15
Identities = 34/43 (79%), Positives = 42/43 (97%)
Frame = +2
Query: 509 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 637
+QF +GR+LAC++SRPGQCGR+DGYILEGKELEFYL+KIKSK+
Sbjct: 166 DQFTSGRILACISSRPGQCGRSDGYILEGKELEFYLKKIKSKK 208
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 128 bits (310), Expect = 9e-29
Identities = 75/151 (49%), Positives = 94/151 (62%), Gaps = 7/151 (4%)
Frame = +3
Query: 36 HWHKAKGPTGGKRAPHTQEEEV*VRASRCKHQARSSAYALRSFTWWKY*VPCAASGHR*L 215
+WHK + TGGKR P+ ++ R A ++ R + V +R L
Sbjct: 7 NWHKRR-KTGGKRKPYHKK-----RKYELGRPAANTKIGPRRIHTVR--VRGGNKKYRAL 58
Query: 216 LLGIGMFN-------SQNPYIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYT 374
L +G F+ + IDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY
Sbjct: 59 RLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYA 118
Query: 375 LPLGRKKGAKLTEAEEAIINKKRSQKTARKY 467
LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 119 LPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
Score = 113 bits (273), Expect = 3e-24
Identities = 49/64 (76%), Positives = 56/64 (87%)
Frame = +1
Query: 67 GNVRPIRKKRKYELGRPAANTRLGPQRMHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 246
G +P KKRKYELGRPAANT++GP+R+H+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 247 TRIL 258
TRI+
Sbjct: 76 TRII 79
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 91.5 bits (217), Expect = 2e-17
Identities = 39/58 (67%), Positives = 50/58 (86%)
Frame = +1
Query: 85 RKKRKYELGRPAANTRLGPQRMHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIL 258
+KKRKYELGRP++NT+LG + + VR RGGN K+RALRLD+GNFSWGS+ TRKTR++
Sbjct: 22 KKKRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVM 79
Score = 75.8 bits (178), Expect = 9e-13
Identities = 33/45 (73%), Positives = 40/45 (88%)
Frame = +3
Query: 255 IDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGR 389
+DVVYNAS+NELVRTKTLVKNAIV VD TPF+ W+++HY L LG+
Sbjct: 79 MDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLELGK 123
Score = 71.7 bits (168), Expect = 1e-11
Identities = 28/43 (65%), Positives = 37/43 (86%)
Frame = +2
Query: 509 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 637
+QF +GRLLAC++SRPGQCGR DGY+LEG+EL FY R++ K+
Sbjct: 144 DQFSSGRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDKKK 186
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 88.2 bits (209), Expect = 2e-16
Identities = 43/65 (66%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Frame = +1
Query: 67 GNVRPIRKKRKYELGRPAANTRLGPQR-MHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 243
G + RKKRKYELGR ANT+L + + VR RGGN K+RALRLDTGN+SWGSE TR
Sbjct: 16 GKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTR 75
Query: 244 KTRIL 258
KTRIL
Sbjct: 76 KTRIL 80
Score = 82.6 bits (195), Expect = 8e-15
Identities = 34/45 (75%), Positives = 42/45 (93%)
Frame = +2
Query: 509 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 643
EQF +GRLLAC++SRPGQCGRADGYILEGKELEFY++K++ K+ K
Sbjct: 173 EQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
Score = 82.2 bits (194), Expect = 1e-14
Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = +3
Query: 255 IDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKK---GAKLTEAEEA 425
+DVVYNASNNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK AK AE
Sbjct: 80 LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQ 139
Query: 426 IINKKRSQKTARKYLARQRLAKVEG 500
+ + ++ R+ + EG
Sbjct: 140 EVEAAAEETKKSNHVTRKLEKRKEG 164
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 87.8 bits (208), Expect = 2e-16
Identities = 37/60 (61%), Positives = 49/60 (81%)
Frame = +1
Query: 85 RKKRKYELGRPAANTRLGPQRMHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRILML 264
RKKR +E GR ANTR+GP+R+H VR+RGGN K+R LRL++GNFSWGSE RK R++++
Sbjct: 22 RKKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRLESGNFSWGSEGIARKVRVIVV 81
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/40 (67%), Positives = 31/40 (77%)
Frame = +2
Query: 509 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIK 628
+QF GRL A V+SRPGQ GR DGYILEG+EL FY R I+
Sbjct: 101 KQFEAGRLYAVVSSRPGQSGRVDGYILEGEELAFYQRAIR 140
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/61 (60%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +1
Query: 79 PIRKKRKYELGRPAANTRLGPQR-MHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRI 255
P+++++ YELGR ANT+L + + VR RGGNTK+RALR DT N+SWGSE TRKTRI
Sbjct: 117 PLQEEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTRKTRI 176
Query: 256 L 258
L
Sbjct: 177 L 177
Score = 76.2 bits (179), Expect = 7e-13
Identities = 33/56 (58%), Positives = 45/56 (80%)
Frame = +3
Query: 255 IDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 422
+DVVY A+NNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 177 LDVVYIATNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +1
Query: 67 GNVRPIRKKRKYELGRPAANTRLGPQRMHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 246
G + RK+ K ELGR ANTRLG +R+ VR+RGGN K RALRLDTGNF+W SE +
Sbjct: 16 GKTKIHRKRMKAELGRLPANTRLGARRVSPVRARGGNFKIRALRLDTGNFAWASEAIAHR 75
Query: 247 TRIL 258
R+L
Sbjct: 76 VRLL 79
Score = 78.2 bits (184), Expect = 2e-13
Identities = 42/90 (46%), Positives = 57/90 (63%)
Frame = +3
Query: 255 IDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIIN 434
+DVVYNA++NELVRTKTLVKN IV VDA PF++WY HY + L K K T+A A+
Sbjct: 79 LDVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGIDLDADK--KSTKA--AVAA 134
Query: 435 KKRSQKTARKYLARQRLAKVEGALESNSTR 524
+K+ +K+A + + K L+ TR
Sbjct: 135 EKKGRKSAHAAADKYDVNKASPKLQREWTR 164
Score = 58.8 bits (136), Expect = 1e-07
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +2
Query: 509 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 637
+Q GR+LA + SRPGQ GRADG +LEG EL+FYL++++ K+
Sbjct: 177 DQLREGRVLARITSRPGQSGRADGILLEGAELQFYLKRLEKKK 219
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 76.6 bits (180), Expect = 5e-13
Identities = 31/46 (67%), Positives = 42/46 (91%)
Frame = +2
Query: 506 REQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 643
+E+F TGRLLAC++S+PGQ GRADGY+ EGKELEF+ +K+K+K+AK
Sbjct: 75 KEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKAK 120
Score = 48.8 bits (111), Expect = 1e-04
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Frame = +3
Query: 312 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 470
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 471 ARQRL--AKVEGALESNSTRG 527
RQ L A VE +L+ G
Sbjct: 61 TRQALPQANVEESLKEEFVTG 81
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 75.4 bits (177), Expect = 1e-12
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +2
Query: 536 ACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 643
AC+ASRPGQCGRADGYILEGKELEFYLRKIK+K+ K
Sbjct: 114 ACIASRPGQCGRADGYILEGKELEFYLRKIKAKKGK 149
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 70.5 bits (165), Expect = 3e-11
Identities = 34/64 (53%), Positives = 43/64 (67%)
Frame = +1
Query: 67 GNVRPIRKKRKYELGRPAANTRLGPQRMHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 246
G ++KK+K +GR ANTRLG R+H VR R G K RALRL+ GNFSW S+ T+
Sbjct: 16 GKKNSMQKKKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRLENGNFSWASQSITKG 75
Query: 247 TRIL 258
T+IL
Sbjct: 76 TKIL 79
Score = 65.7 bits (153), Expect = 1e-09
Identities = 27/43 (62%), Positives = 35/43 (81%)
Frame = +2
Query: 509 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 637
E F +GR+LAC++SRPGQ G +GYILEGKEL+FY +KI K+
Sbjct: 194 EGFQSGRVLACISSRPGQTGSVEGYILEGKELDFYSKKISDKK 236
Score = 55.6 bits (128), Expect = 1e-06
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Frame = +3
Query: 255 IDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIIN 434
++VVYNAS+N+ VRT TLVK AI+ +D PFR W+ Y + K E+
Sbjct: 79 LNVVYNASDNDFVRTNTLVKGAIIEIDPAPFRLWFLKFYGKDIASTDYYKSLESATFKTE 138
Query: 435 KK----RSQKTARKYLARQRLAKVEGALESNS 518
KK + ++ K +A Q++A+ + AL + S
Sbjct: 139 KKVVVPKEEENKEKTIA-QQIAETQVALMNPS 169
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 62.9 bits (146), Expect = 7e-09
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = +1
Query: 34 FTGIKRKGPPVGNVRPIRKKRKYELGRPAANTRLGPQRMHSVRSRGGNTKYRALRLDTGN 213
F G + P G +RP KR+YELGR TRLG + + +RS GGN+K+ LR D N
Sbjct: 4 FQGRATRKPSGGKLRPNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYAN 63
Query: 214 FSWGSECSTRKTRI 255
+ +TRK +I
Sbjct: 64 VYNPKDKTTRKVKI 77
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/42 (59%), Positives = 36/42 (85%)
Frame = +2
Query: 509 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 634
+Q +G++LA + SRPGQ GRADGYILEG+EL+++L+KI+ K
Sbjct: 137 DQILSGKILARICSRPGQSGRADGYILEGQELDYFLKKIQKK 178
Score = 50.0 bits (114), Expect = 5e-05
Identities = 27/58 (46%), Positives = 36/58 (62%)
Frame = +1
Query: 85 RKKRKYELGRPAANTRLGPQRMHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIL 258
RKKR + GR +NT++G + + +R RGG K RAL L GNFS+ S T K +IL
Sbjct: 22 RKKRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFLSYGNFSFVSIQRTFKAKIL 79
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3
Query: 255 IDVVYNASNNELVRTKTLVKNAIVVVD 335
+ V +N S+NELVRT TL K +IV +D
Sbjct: 79 LSVAFNESSNELVRTNTLTKGSIVYLD 105
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 60.5 bits (140), Expect = 4e-08
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 9/80 (11%)
Frame = +1
Query: 88 KKRKYELGRPAANTRL---------GPQRMHSVRSRGGNTKYRALRLDTGNFSWGSECST 240
KKRKY LGR ANT+L Q++ ++R RGGN K RALRL G+F+WGS +
Sbjct: 23 KKRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGGNIKRRALRLSHGSFAWGSADIS 82
Query: 241 RKTRILMLCIMHLTMNWCVQ 300
K RIL + + + T N V+
Sbjct: 83 HKARILQV-VYNSTSNELVR 101
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +2
Query: 509 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 634
+Q +LA ++SRPGQ G ADGYILEG EL FY +K+ K
Sbjct: 133 DQIRGDHILARISSRPGQVGTADGYILEGPELLFYQKKLAPK 174
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +3
Query: 255 IDVVYNASNNELVRTKTLVKNAIVVVDATPFR 350
+ VVYN+++NELVRT TLVK +V +D+ PF+
Sbjct: 88 LQVVYNSTSNELVRTNTLVKGCVVQIDSAPFK 119
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/72 (37%), Positives = 44/72 (61%)
Frame = +1
Query: 85 RKKRKYELGRPAANTRLGPQRMHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRILML 264
RKKR G ++T++G +++ VR RGGN KY+ALRLD G+F + + R ++L +
Sbjct: 22 RKKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRLDMGHFKFITTGKFRMAKLLQV 81
Query: 265 CIMHLTMNWCVQ 300
+ H + N V+
Sbjct: 82 -VYHPSSNELVR 92
Score = 49.2 bits (112), Expect = 9e-05
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +2
Query: 509 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 634
E F G L A + SRPGQ G A G++L+G EL+FY K K
Sbjct: 126 ESFEKGHLYAIITSRPGQVGMAQGHVLQGDELKFYADKFNKK 167
Score = 41.5 bits (93), Expect = 0.018
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +3
Query: 255 IDVVYNASNNELVRTKTLVKNAIVVVDATPFR 350
+ VVY+ S+NELVRT TL K+++V + A PF+
Sbjct: 79 LQVVYHPSSNELVRTNTLTKSSVVKISAEPFK 110
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 50.0 bits (114), Expect = 5e-05
Identities = 26/66 (39%), Positives = 37/66 (56%)
Frame = +1
Query: 58 PPVGNVRPIRKKRKYELGRPAANTRLGPQRMHSVRSRGGNTKYRALRLDTGNFSWGSECS 237
P G + K++ E+GR A T +G +R VR+ GGN K RALRL+ S +
Sbjct: 11 PSGGRYHTSQGKKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPATGE 70
Query: 238 TRKTRI 255
T+KT+I
Sbjct: 71 TKKTKI 76
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 34 FTGIKRKGPPVGNVRPIRKKRKYELGRPAANTRLGPQRMHSV-RSRGGNTKYRALRLDTG 210
F G K G+++ RKKR++ELGR T+LG + V R+ GGNTK +T
Sbjct: 4 FQGKSGKKATGGSLKQSRKKRRFELGREPTLTKLGTKTERKVIRTMGGNTKVILFTAETA 63
Query: 211 NFSWGSECSTRKTRIL 258
N SE +K +I+
Sbjct: 64 NVYDASEKKIKKAKII 79
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 44.0 bits (99), Expect = 0.003
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +1
Query: 43 IKRKGPPVGNVRPIRKKRKYELGRPAANTRLGPQR-MHSVRSRGGNTKYRALRLDTGNFS 219
+K+K G + I KK+ + G NT L + R RGGN K++A+ L G+F
Sbjct: 1 MKKKKLTGGKKKKISKKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQ 60
Query: 220 WGSECSTRKTRILMLCIMHLTMNWCVQRPLSR 315
W + ++ ++IL + + +R LS+
Sbjct: 61 WKTMQLSKNSKILSVLYNQANLKLVQKRNLSK 92
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 40 GIKRKGPPVGNVRPIRKKRKYELGRPAANTRLGPQR-MHSVRSRGGNTK 183
G + P G +RP RKKRK+E+G P T +G +R + R GGN K
Sbjct: 6 GRSLRKPTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVK 54
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 41.9 bits (94), Expect = 0.014
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 40 GIKRKGPPVGNVRPIRKKRKYELGRPAANTRLGPQ-RMHSVRSRGGNTKYRALRLDTGNF 216
G K P G + RKKRK ELGR +NTR+ Q + +R+ GGN K R N
Sbjct: 6 GRSLKKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANV 65
Query: 217 SWGSECSTRKTRIL 258
+ RK RI+
Sbjct: 66 -FDKSGKGRKVRII 78
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 38.7 bits (86), Expect = 0.13
Identities = 29/81 (35%), Positives = 41/81 (50%)
Frame = +3
Query: 285 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 464
ELVRT+TLVKNAI+ Q Y HY L +G KK A T ++ +++ RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78
Query: 465 YLARQRLAKVEGALESNSTRG 527
RQ+ K++ +E G
Sbjct: 79 LEKRQQDHKLDPHIEEQFGSG 99
>UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Uncultured methanogenic archaeon RC-I
Length = 125
Score = 37.5 bits (83), Expect = 0.30
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 67 GNVRPIRKKRKYELGRPAANTRLGPQRMHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 246
G +R R KRK+ELGR +G Q++ + G +K R L+ D N + T+K
Sbjct: 14 GRLRLNRSKRKFELGRDFTIPVIGAQKLKVLNVTGNGSKVRVLKSDVVNVTDPKTGKTQK 73
Query: 247 TRI 255
++
Sbjct: 74 VKM 76
>UniRef50_Q9HPE9 Cluster: 30S ribosomal protein S8e; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S8e -
Halobacterium salinarium (Halobacterium halobium)
Length = 124
Score = 36.7 bits (81), Expect = 0.52
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +1
Query: 34 FTGIKRKGPPVGNVRPIRKKRKYELGRPAANTRLGPQRMHSVRSRGGNTKYRALRLDTGN 213
+ G ++ +RP KK K ELGR T +G R +V RG K R L + N
Sbjct: 3 YQGRSKRSKTGARLRPRSKKSKSELGREPTETTVGEPRFRTVDVRGDAEKVRVLSTNVVN 62
Query: 214 FSWGS 228
+ S
Sbjct: 63 VATDS 67
>UniRef50_A1YJC5 Cluster: Putative uncharacterized protein; n=1;
Spodoptera frugiperda MNPV|Rep: Putative uncharacterized
protein - Spodoptera frugiperda nuclear polyhedrosis
virus (SfNPV)
Length = 106
Score = 35.1 bits (77), Expect = 1.6
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +3
Query: 231 MFNSQNPYIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKK 395
+FN PY+ VV SNN+ ++ N +V + P++ +Y+ H T+ ++K
Sbjct: 25 IFNKNVPYVYVVKLDSNNDFQDIYKMIDNEVVEIKRPPYK-YYKVHLTINAAKEK 78
>UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3;
Desulfurococcales|Rep: 30S ribosomal protein S8e -
Aeropyrum pernix
Length = 136
Score = 35.1 bits (77), Expect = 1.6
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +1
Query: 49 RKGPPVGNVRPIRK-KRKYELGRPAANTRLGP---QRMHSVRSRGGNTKYRALRLDTGNF 216
+K P G R K KRKY GRP T L + VR+RGG+ K +A ++
Sbjct: 9 KKKPSGGKRRYYYKVKRKYAAGRPPTYTTLSAAEEEERKPVRARGGSYKIKAKKVAFAVV 68
Query: 217 SWGSECSTRKTRILML 264
S RK RIL +
Sbjct: 69 SNPKTGEARKARILRI 84
>UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4;
Archaea|Rep: 30S ribosomal protein S8e - Sulfolobus
solfataricus
Length = 133
Score = 34.3 bits (75), Expect = 2.8
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 85 RKKRKYELGRPAANTRLGPQRMH-SVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIL 258
R KRKYE+G P T L + + R+ GGN K R T N + + +K +IL
Sbjct: 21 RDKRKYEIGNPPTFTTLSAEDIRIKDRTLGGNFKVRLKYTTTANVLDPATNTAKKVKIL 79
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 33.9 bits (74), Expect = 3.7
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 273 ASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRS 446
AS EL KTL K A+ ++D PF W + L R G L A+E +INK+ +
Sbjct: 194 ASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQE-LINKQNT 251
>UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:
PV1H14180_P - Plasmodium vivax
Length = 1011
Score = 33.1 bits (72), Expect = 6.4
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +3
Query: 393 KGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEG---ALESNSTR 524
+G KL EAE+ ++ +++S+ A K L ++ + ++EG LE TR
Sbjct: 586 EGGKLMEAEKKLLEEEKSRVDAEKKLMQEEMTRIEGEKKLLEGEMTR 632
>UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5;
Methanococcus|Rep: 30S ribosomal protein S8e -
Methanococcus maripaludis
Length = 128
Score = 33.1 bits (72), Expect = 6.4
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 88 KKRKYELGRPAANTRLGPQ-RMHSVRSRGGNTKYRALRLDTGN 213
KK K E+GRPAA T++ + + VR RG N K + + + N
Sbjct: 22 KKHKREMGRPAAETQVSDKIKRKIVRCRGANLKVKLEKTNYAN 64
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 8.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 321 IVVVDATPFRQWYESHYTLPLGRKK 395
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
>UniRef50_Q0D4A4 Cluster: Os07g0638000 protein; n=4; Oryza
sativa|Rep: Os07g0638000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 401
Score = 32.7 bits (71), Expect = 8.4
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 378 PLGRKKGAKLT-EAEEAIINKKRSQKTARKYLARQRLAKVEGALESNSTRGVCWLAWRVA 554
P GR +G+ +I+ + S+K +ARQR+ ++EG L N + +C L R+A
Sbjct: 157 PSGRTRGSGSPFRCISSIVQQMNSEKDQEISVARQRIEELEG-LVCNKQKEICMLTSRLA 215
Query: 555 QV 560
V
Sbjct: 216 AV 217
>UniRef50_Q5CW62 Cluster: FH2 domain containing protein; n=2;
Cryptosporidium|Rep: FH2 domain containing protein -
Cryptosporidium parvum Iowa II
Length = 967
Score = 32.7 bits (71), Expect = 8.4
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -2
Query: 341 SCIYYNNCILDKGLCTHQFIVRCIIHNINIRVLRVEHSDPQ 219
S I Y N ++G C H F C N +I LR+ HSDPQ
Sbjct: 858 SIIKYPNYFNNQGFCEHNFAEICDNSN-SIYDLRIIHSDPQ 897
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 32.7 bits (71), Expect = 8.4
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 336 ATPFRQWYESHYTLPLGRKKGAKLTEAE 419
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,010,478
Number of Sequences: 1657284
Number of extensions: 13139373
Number of successful extensions: 36665
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 35384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36641
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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