Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30551
(678 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118446-1|AAM48475.1| 208|Drosophila melanogaster SD17528p pro... 129 4e-30
AY118424-1|AAM48453.1| 208|Drosophila melanogaster RH06886p pro... 129 4e-30
AE014297-4463|AAN14192.1| 208|Drosophila melanogaster CG7808-PC... 129 4e-30
AY060597-1|AAL28145.1| 664|Drosophila melanogaster GH01406p pro... 34 0.21
AE014134-1719|ABC65887.1| 664|Drosophila melanogaster CG5899-PB... 34 0.21
AE014134-1718|ABC65886.1| 831|Drosophila melanogaster CG5899-PC... 34 0.21
AE014134-1717|AAF52824.1| 844|Drosophila melanogaster CG5899-PA... 34 0.21
>AY118446-1|AAM48475.1| 208|Drosophila melanogaster SD17528p
protein.
Length = 208
Score = 129 bits (311), Expect = 4e-30
Identities = 61/92 (66%), Positives = 72/92 (78%), Gaps = 2/92 (2%)
Frame = +3
Query: 258 DVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--II 431
DVVYNASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPLGRK+ K + E+ ++
Sbjct: 80 DVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVL 139
Query: 432 NKKRSQKTARKYLARQRLAKVEGALESNSTRG 527
KKRS+K +KYL RQ+ KVE ALE T G
Sbjct: 140 TKKRSEKVMKKYLERQKYGKVEQALEDQFTSG 171
Score = 97.5 bits (232), Expect = 1e-20
Identities = 44/63 (69%), Positives = 52/63 (82%)
Frame = +1
Query: 67 GNVRPIRKKRKYELGRPAANTRLGPQRMHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 246
G + +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL+TGNF+W SE RK
Sbjct: 16 GKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFAWASEGVARK 75
Query: 247 TRI 255
TRI
Sbjct: 76 TRI 78
Score = 82.6 bits (195), Expect = 4e-16
Identities = 34/43 (79%), Positives = 42/43 (97%)
Frame = +2
Query: 509 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 637
+QF +GR+LAC++SRPGQCGR+DGYILEGKELEFYL+KIKSK+
Sbjct: 166 DQFTSGRILACISSRPGQCGRSDGYILEGKELEFYLKKIKSKK 208
>AY118424-1|AAM48453.1| 208|Drosophila melanogaster RH06886p
protein.
Length = 208
Score = 129 bits (311), Expect = 4e-30
Identities = 61/92 (66%), Positives = 72/92 (78%), Gaps = 2/92 (2%)
Frame = +3
Query: 258 DVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--II 431
DVVYNASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPLGRK+ K + E+ ++
Sbjct: 80 DVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVL 139
Query: 432 NKKRSQKTARKYLARQRLAKVEGALESNSTRG 527
KKRS+K +KYL RQ+ KVE ALE T G
Sbjct: 140 TKKRSEKVMKKYLERQKYGKVEQALEDQFTSG 171
Score = 97.5 bits (232), Expect = 1e-20
Identities = 44/63 (69%), Positives = 52/63 (82%)
Frame = +1
Query: 67 GNVRPIRKKRKYELGRPAANTRLGPQRMHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 246
G + +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL+TGNF+W SE RK
Sbjct: 16 GKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFAWASEGVARK 75
Query: 247 TRI 255
TRI
Sbjct: 76 TRI 78
Score = 82.6 bits (195), Expect = 4e-16
Identities = 34/43 (79%), Positives = 42/43 (97%)
Frame = +2
Query: 509 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 637
+QF +GR+LAC++SRPGQCGR+DGYILEGKELEFYL+KIKSK+
Sbjct: 166 DQFTSGRILACISSRPGQCGRSDGYILEGKELEFYLKKIKSKK 208
>AE014297-4463|AAN14192.1| 208|Drosophila melanogaster CG7808-PC
protein.
Length = 208
Score = 129 bits (311), Expect = 4e-30
Identities = 61/92 (66%), Positives = 72/92 (78%), Gaps = 2/92 (2%)
Frame = +3
Query: 258 DVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--II 431
DVVYNASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPLGRK+ K + E+ ++
Sbjct: 80 DVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVL 139
Query: 432 NKKRSQKTARKYLARQRLAKVEGALESNSTRG 527
KKRS+K +KYL RQ+ KVE ALE T G
Sbjct: 140 TKKRSEKVMKKYLERQKYGKVEQALEDQFTSG 171
Score = 97.5 bits (232), Expect = 1e-20
Identities = 44/63 (69%), Positives = 52/63 (82%)
Frame = +1
Query: 67 GNVRPIRKKRKYELGRPAANTRLGPQRMHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 246
G + +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL+TGNF+W SE RK
Sbjct: 16 GKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFAWASEGVARK 75
Query: 247 TRI 255
TRI
Sbjct: 76 TRI 78
Score = 82.6 bits (195), Expect = 4e-16
Identities = 34/43 (79%), Positives = 42/43 (97%)
Frame = +2
Query: 509 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 637
+QF +GR+LAC++SRPGQCGR+DGYILEGKELEFYL+KIKSK+
Sbjct: 166 DQFTSGRILACISSRPGQCGRSDGYILEGKELEFYLKKIKSKK 208
>AY060597-1|AAL28145.1| 664|Drosophila melanogaster GH01406p
protein.
Length = 664
Score = 33.9 bits (74), Expect = 0.21
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 273 ASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRS 446
AS EL KTL K A+ ++D PF W + L R G L A+E +INK+ +
Sbjct: 194 ASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQE-LINKQNT 251
>AE014134-1719|ABC65887.1| 664|Drosophila melanogaster CG5899-PB,
isoform B protein.
Length = 664
Score = 33.9 bits (74), Expect = 0.21
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 273 ASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRS 446
AS EL KTL K A+ ++D PF W + L R G L A+E +INK+ +
Sbjct: 194 ASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQE-LINKQNT 251
>AE014134-1718|ABC65886.1| 831|Drosophila melanogaster CG5899-PC,
isoform C protein.
Length = 831
Score = 33.9 bits (74), Expect = 0.21
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 273 ASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRS 446
AS EL KTL K A+ ++D PF W + L R G L A+E +INK+ +
Sbjct: 181 ASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQE-LINKQNT 238
>AE014134-1717|AAF52824.1| 844|Drosophila melanogaster CG5899-PA,
isoform A protein.
Length = 844
Score = 33.9 bits (74), Expect = 0.21
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 273 ASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRS 446
AS EL KTL K A+ ++D PF W + L R G L A+E +INK+ +
Sbjct: 194 ASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQE-LINKQNT 251
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,146,152
Number of Sequences: 53049
Number of extensions: 632538
Number of successful extensions: 1516
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1513
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -