Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30551
(678 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 153 2e-39
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 24 1.5
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 24 1.5
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 22 4.7
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 22 4.7
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 6.2
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 6.2
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 6.2
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 8.2
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 8.2
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 8.2
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 21 8.2
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 153 bits (370), Expect = 2e-39
Identities = 87/166 (52%), Positives = 104/166 (62%), Gaps = 2/166 (1%)
Frame = +3
Query: 36 HWHKAKGPTGGKRAPHTQEEEV*V-RASRCKHQARSSAYALRSFTW-WKY*VPCAASGHR 209
HWHK + TGGKR P ++ + + R + + +R+ KY +G+
Sbjct: 7 HWHKRRA-TGGKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRLDTGN- 64
Query: 210 *LLLGIGMFNSQNPYIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGR 389
G + IDVVYNASNNELVRTKTLVKNAIV +DATPFRQWYE HY LPLGR
Sbjct: 65 -FSWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHYVLPLGR 123
Query: 390 KKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALESNSTRG 527
K+GAKLTEAEE ++NKKRS+K KY ARQR AKVE ALE G
Sbjct: 124 KRGAKLTEAEEEVLNKKRSKKAEAKYKARQRFAKVEPALEEQFATG 169
Score = 122 bits (295), Expect = 2e-30
Identities = 53/64 (82%), Positives = 61/64 (95%)
Frame = +1
Query: 67 GNVRPIRKKRKYELGRPAANTRLGPQRMHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 246
G +PIRKKRK+ELGRPAANT+LGPQR+H+VR+RGGN KYRALRLDTGNFSWGSEC+TRK
Sbjct: 16 GKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRLDTGNFSWGSECTTRK 75
Query: 247 TRIL 258
TRI+
Sbjct: 76 TRII 79
Score = 87.0 bits (206), Expect = 1e-19
Identities = 37/45 (82%), Positives = 43/45 (95%)
Frame = +2
Query: 509 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 643
EQF TGR+LAC++SRPGQCGR DGYILEGKELEFY+R+IKSK+AK
Sbjct: 164 EQFATGRVLACISSRPGQCGREDGYILEGKELEFYMRRIKSKKAK 208
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 23.8 bits (49), Expect = 1.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 329 YNNCILDKGLCT 294
Y NC+LD+G CT
Sbjct: 46 YVNCLLDQGPCT 57
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 23.8 bits (49), Expect = 1.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 329 YNNCILDKGLCT 294
Y NC+LD+G CT
Sbjct: 46 YVNCLLDQGPCT 57
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 22.2 bits (45), Expect = 4.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 329 YNNCILDKGLCTHQ 288
Y C+LD+G CT++
Sbjct: 43 YIKCMLDEGPCTNE 56
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 22.2 bits (45), Expect = 4.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 329 YNNCILDKGLCTHQ 288
Y C+LD+G CT++
Sbjct: 43 YIKCMLDEGPCTNE 56
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 362 LIPLPEWSCIYYNNC 318
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 362 LIPLPEWSCIYYNNC 318
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 362 LIPLPEWSCIYYNNC 318
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 362 LIPLPEWSCIYYNNC 318
L P P+WS Y +C
Sbjct: 109 LQPYPDWSFAKYEDC 123
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 362 LIPLPEWSCIYYNNC 318
L P P+WS Y +C
Sbjct: 110 LRPYPDWSFAKYEDC 124
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 362 LIPLPEWSCIYYNNC 318
L P P+WS Y +C
Sbjct: 108 LQPYPDWSWANYKDC 122
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 362 LIPLPEWSCIYYNNC 318
L P P+WS Y +C
Sbjct: 108 LQPYPDWSWANYKDC 122
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,838
Number of Sequences: 438
Number of extensions: 3914
Number of successful extensions: 22
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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