Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30547
(778 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SR71 Cluster: Predicted protein; n=1; Nematostella ve... 160 4e-38
UniRef50_Q9Y2Z6 Cluster: CGI-07 protein; n=41; Eumetazoa|Rep: CG... 156 5e-37
UniRef50_Q55BF2 Cluster: Putative uncharacterized protein; n=2; ... 150 3e-35
UniRef50_A4S880 Cluster: Predicted protein; n=2; Ostreococcus|Re... 139 6e-32
UniRef50_A1C806 Cluster: Nonsense-mediated mRNA decay protein 3;... 134 2e-30
UniRef50_Q5CGV5 Cluster: Upf1p-interacting protein; Nmd3p; n=2; ... 133 4e-30
UniRef50_Q09817 Cluster: Uncharacterized protein C16C9.03; n=5; ... 131 2e-29
UniRef50_Q22792 Cluster: Putative uncharacterized protein; n=2; ... 129 7e-29
UniRef50_P38861 Cluster: Nonsense-mediated mRNA decay protein 3;... 128 1e-28
UniRef50_A7PYY1 Cluster: Chromosome chr4 scaffold_39, whole geno... 126 8e-28
UniRef50_A0EA85 Cluster: Chromosome undetermined scaffold_86, wh... 124 3e-27
UniRef50_Q5K9L0 Cluster: RNA binding protein, putative; n=5; Dik... 121 2e-26
UniRef50_UPI00006CFAB5 Cluster: NMD3 family protein; n=1; Tetrah... 117 3e-25
UniRef50_A7ARX8 Cluster: Nonsense-mediated mRNA decay protein, p... 111 1e-23
UniRef50_Q4UI16 Cluster: Nonsense-mediated mRNA decay protein (N... 110 4e-23
UniRef50_UPI0000499987 Cluster: Nonsense-mediated mRNA decay pro... 109 8e-23
UniRef50_Q7RPI5 Cluster: Putative uncharacterized protein PY0147... 101 2e-20
UniRef50_Q7QV23 Cluster: GLP_180_23828_22353; n=1; Giardia lambl... 100 4e-20
UniRef50_A5KA13 Cluster: mRNA decay protein, putative; n=1; Plas... 97 4e-19
UniRef50_Q336P7 Cluster: NMD3 family protein, expressed; n=7; Ma... 95 1e-18
UniRef50_Q8IBG6 Cluster: Putative uncharacterized protein PF07_0... 95 2e-18
UniRef50_A0BI83 Cluster: Chromosome undetermined scaffold_109, w... 94 4e-18
UniRef50_A2EJP0 Cluster: NMD3 family protein; n=2; Trichomonas v... 93 9e-18
UniRef50_Q6CF61 Cluster: Yarrowia lipolytica chromosome B of str... 91 4e-17
UniRef50_A2F1J4 Cluster: NMD3 family protein; n=1; Trichomonas v... 84 4e-15
UniRef50_Q5JK50 Cluster: Putative uncharacterized protein OJ1294... 83 1e-14
UniRef50_Q8SQL6 Cluster: NON SENSE MEDIATED mRNA DECAY PROTEIN 3... 75 3e-12
UniRef50_A5AJ02 Cluster: Putative uncharacterized protein; n=1; ... 53 7e-06
UniRef50_Q0DJ34 Cluster: Os05g0333000 protein; n=1; Oryza sativa... 45 0.002
UniRef50_A7QHN7 Cluster: Chromosome chr8 scaffold_99, whole geno... 44 0.006
UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3; ... 44 0.006
UniRef50_A2Y3B2 Cluster: Putative uncharacterized protein; n=2; ... 41 0.030
UniRef50_A7PWF6 Cluster: Chromosome chr8 scaffold_34, whole geno... 40 0.069
UniRef50_A6GVM4 Cluster: Probable type I endonuclease-methyltran... 35 2.0
UniRef50_UPI00006A1959 Cluster: UPI00006A1959 related cluster; n... 34 4.6
UniRef50_Q8ILC6 Cluster: Putative uncharacterized protein; n=4; ... 33 8.0
>UniRef50_A7SR71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 428
Score = 160 bits (388), Expect = 4e-38
Identities = 69/126 (54%), Positives = 92/126 (73%)
Frame = +1
Query: 253 KYLQPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEV 432
+ + PP+ W CALESRE ++V+LIDAGF WTEPHSKRIKVKLT+Q EV
Sbjct: 45 RQVDPPNNWASCALESRELLAICLKKLKGLNKVRLIDAGFVWTEPHSKRIKVKLTIQKEV 104
Query: 433 IGGAVLQQTFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLILKHK 612
+ +LQQ F+VE+ +Q QMCDACH Q + +A+VQVRQ+ +++KTF+YLEQLI+KH
Sbjct: 105 MNSTILQQVFVVEYVVQGQMCDACHRQAAQDFWKAVVQVRQKTSHKKTFFYLEQLIIKHN 164
Query: 613 AHENTL 630
H+NT+
Sbjct: 165 VHQNTV 170
Score = 77.4 bits (182), Expect = 4e-13
Identities = 29/50 (58%), Positives = 38/50 (76%)
Frame = +2
Query: 122 LCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCENICNHP 271
LCCQC +P N +NMCV C+R+ VDIT+GIPKQ+TL+FC+ CE + P
Sbjct: 1 LCCQCGLPTPPNSANMCVGCIRSQVDITEGIPKQSTLYFCKNCERQVDPP 50
>UniRef50_Q9Y2Z6 Cluster: CGI-07 protein; n=41; Eumetazoa|Rep:
CGI-07 protein - Homo sapiens (Human)
Length = 503
Score = 156 bits (379), Expect = 5e-37
Identities = 70/127 (55%), Positives = 92/127 (72%), Gaps = 1/127 (0%)
Frame = +1
Query: 253 KYLQPPSEWVVCALESREXXXXXXXXXXXX-SRVKLIDAGFAWTEPHSKRIKVKLTVQGE 429
+Y QPP W+ CALESRE S+V+L+DAGF WTEPHSKR+KVKLT+Q E
Sbjct: 60 RYFQPPGTWIQCALESRELLALCLKKIKAPLSKVRLVDAGFVWTEPHSKRLKVKLTIQKE 119
Query: 430 VIGGAVLQQTFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLILKH 609
V+ GA+LQQ F+V++ +Q QMC CH + K +A++QVRQ+ ++KTFYYLEQLILK+
Sbjct: 120 VMNGAILQQVFVVDYVVQSQMCGDCHRVEAKDFWKAVIQVRQKTLHKKTFYYLEQLILKY 179
Query: 610 KAHENTL 630
H+NTL
Sbjct: 180 GMHQNTL 186
Score = 77.8 bits (183), Expect = 3e-13
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = +2
Query: 71 MEYFAPENASLSNNTRILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGC 250
MEY A E+ S ILCC+C VPI NP+N+CVACLR+ VDI+ GIPKQ ++ FC+ C
Sbjct: 1 MEYMA-ESTDRSPG-HILCCECGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQC 58
Query: 251 ENICNHP 271
+ P
Sbjct: 59 QRYFQPP 65
>UniRef50_Q55BF2 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 530
Score = 150 bits (364), Expect = 3e-35
Identities = 67/129 (51%), Positives = 89/129 (68%)
Frame = +1
Query: 244 GL*KYLQPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQ 423
G +YLQPP+ W + LESRE ++VKL+DAG+ WTEPHSKR+KVKLT+Q
Sbjct: 54 GCARYLQPPNHWAIAELESRELLTICIKRIKGLNKVKLVDAGWVWTEPHSKRLKVKLTIQ 113
Query: 424 GEVIGGAVLQQTFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLIL 603
EV A+LQQ FI+EF +Q Q CD C + K T ++VQ+RQ+ ++++TF Y+EQLIL
Sbjct: 114 KEVFTSAILQQIFIIEFIVQGQQCDKCQKFEAKDTWNSVVQLRQKVDHKRTFLYIEQLIL 173
Query: 604 KHKAHENTL 630
KH AH TL
Sbjct: 174 KHNAHSQTL 182
Score = 76.2 bits (179), Expect = 9e-13
Identities = 31/51 (60%), Positives = 37/51 (72%)
Frame = +2
Query: 119 ILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCENICNHP 271
ILCC C V I ANPSNMCV C+++ VDIT+GIPKQ T+ +CRGC P
Sbjct: 12 ILCCMCGVLIPANPSNMCVDCIKSQVDITEGIPKQLTIQWCRGCARYLQPP 62
>UniRef50_A4S880 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 507
Score = 139 bits (337), Expect = 6e-32
Identities = 63/132 (47%), Positives = 86/132 (65%), Gaps = 1/132 (0%)
Frame = +1
Query: 253 KYLQPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEV 432
+YLQPP W+ LES+E +VKL+DAGF WTEPHSKR+K KLT+Q EV
Sbjct: 47 RYLQPPKHWIRADLESKELLTFCIKRIKGLQKVKLVDAGFVWTEPHSKRLKTKLTIQKEV 106
Query: 433 IGGAVLQQTFIVEFTIQHQMCDACHLQKLKI-TGRALVQVRQRANNRKTFYYLEQLILKH 609
+ GA+LQQTF+ EF ++ +MCDAC A VQVRQ+ +++TF +LEQ+ILKH
Sbjct: 107 LNGAILQQTFVTEFVVEWRMCDACARSAANSDQWNACVQVRQKVEHKRTFLFLEQMILKH 166
Query: 610 KAHENTLGDQAQ 645
+ +G ++Q
Sbjct: 167 GMERDAIGIKSQ 178
Score = 66.5 bits (155), Expect = 7e-10
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +2
Query: 119 ILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCENICNHP 271
+LCC CA+P+ NPS MCV C+R VDIT+GI K + +C CE P
Sbjct: 2 VLCCLCAIPMHPNPSGMCVECVRTQVDITEGISKNCVVTYCSQCERYLQPP 52
>UniRef50_A1C806 Cluster: Nonsense-mediated mRNA decay protein 3;
n=18; Pezizomycotina|Rep: Nonsense-mediated mRNA decay
protein 3 - Aspergillus clavatus
Length = 533
Score = 134 bits (325), Expect = 2e-30
Identities = 60/126 (47%), Positives = 84/126 (66%)
Frame = +1
Query: 253 KYLQPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEV 432
++LQPP+ WV ALES+E ++V++IDA F WTEPHS+R+KVK+T+Q E
Sbjct: 68 RWLQPPTAWVSAALESKELLALCLRKLRGLAKVRIIDASFIWTEPHSRRVKVKITIQQEA 127
Query: 433 IGGAVLQQTFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLILKHK 612
G ++QQ+F VE+ + Q C C T RA VQVRQ+ +++TF YLEQLILKH
Sbjct: 128 FQGTIVQQSFEVEYVVHAQQCPDCQKSYTHNTWRASVQVRQKVPHKRTFLYLEQLILKHN 187
Query: 613 AHENTL 630
AH++T+
Sbjct: 188 AHQDTV 193
Score = 56.4 bits (130), Expect = 7e-07
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 80 FAPENASLSNNTRILCCQCAVPIEANPSN--MCVACLRAHVDITDGIPKQATLFFCRGCE 253
FAP+ S ILCC C PI+ S +C C+R VDI+ GIP++ + FCR CE
Sbjct: 11 FAPQE---SITATILCCNCGAPIDGTTSAGALCQDCVRLTVDISQGIPREGVIHFCRDCE 67
Query: 254 NICNHP 271
P
Sbjct: 68 RWLQPP 73
>UniRef50_Q5CGV5 Cluster: Upf1p-interacting protein; Nmd3p; n=2;
Cryptosporidium|Rep: Upf1p-interacting protein; Nmd3p -
Cryptosporidium hominis
Length = 588
Score = 133 bits (322), Expect = 4e-30
Identities = 70/163 (42%), Positives = 96/163 (58%)
Frame = +1
Query: 253 KYLQPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEV 432
++ +PP WV C LESRE + V+L+DA F WTEPHS+R+KVK T+Q EV
Sbjct: 90 RFQKPP--WVSCQLESRELLALCLKKIKGLNTVRLVDASFIWTEPHSRRLKVKCTIQKEV 147
Query: 433 IGGAVLQQTFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLILKHK 612
+ GA++QQ+ +VEF +Q Q CD C T +VQVRQR +++TF YLEQLILKH
Sbjct: 148 MNGAIIQQSIVVEFFMQAQQCDDCRRSFTPHTWNTVVQVRQRVEHKRTFLYLEQLILKHG 207
Query: 613 AHENTLGDQAQA*WTRFPSIQPENPCAPKWLDFNSIWFLALIK 741
AHE + F Q + A K +DF + +F + +K
Sbjct: 208 AHEKVSNIVEKPDGLDFQFQQKSH--AQKLVDFITHYFASKVK 248
Score = 66.1 bits (154), Expect = 9e-10
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = +2
Query: 125 CCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCENICNHP 271
CC C V E NPS MC+ C+R+ VDIT+GI +QA + FCR CE P
Sbjct: 47 CCVCGVATEINPSRMCINCIRSEVDITEGISRQAIISFCRQCERFQKPP 95
>UniRef50_Q09817 Cluster: Uncharacterized protein C16C9.03; n=5;
Ascomycota|Rep: Uncharacterized protein C16C9.03 -
Schizosaccharomyces pombe (Fission yeast)
Length = 498
Score = 131 bits (317), Expect = 2e-29
Identities = 60/126 (47%), Positives = 82/126 (65%)
Frame = +1
Query: 253 KYLQPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEV 432
+Y+QPP+ W++ LESRE ++V+L+DA F WTEPHS+RIKVKLTVQ E
Sbjct: 67 RYMQPPNNWMIAPLESRELMAICLKKLRGLNQVRLVDANFIWTEPHSRRIKVKLTVQKEA 126
Query: 433 IGGAVLQQTFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLILKHK 612
+LQQ+F VEF + + C C +A+ QVRQ+ +++TF YLEQ+ILKHK
Sbjct: 127 FTNTILQQSFQVEFYVNNTQCPDCARTYTPHIWKAVCQVRQKVLHKRTFLYLEQIILKHK 186
Query: 613 AHENTL 630
AH NT+
Sbjct: 187 AHMNTV 192
Score = 60.5 bits (140), Expect = 5e-08
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +2
Query: 119 ILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCENICNHP 271
ILCC+C VP N + MC+ C++ DIT GIP+++T+ CR CE P
Sbjct: 22 ILCCECGVPTPPNAAAMCMDCIKMTTDITSGIPRESTVNHCRECERYMQPP 72
>UniRef50_Q22792 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 513
Score = 129 bits (312), Expect = 7e-29
Identities = 63/128 (49%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
Frame = +1
Query: 253 KYLQPPSEWVVCALESREXXXXXXXXXXXX-SRVKLIDAGFAWTEPHSKRIKVKLTVQGE 429
+Y PPS W+ LES+E ++V+L DA F WTE HSKRIKVK+T+Q E
Sbjct: 58 RYFVPPSAWMRAELESKELLSICLKKLKPMLTKVRLTDACFVWTEAHSKRIKVKITIQKE 117
Query: 430 VIGGAVLQQTFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLILKH 609
V +LQQ +VEFT+ Q+CD C + K RA VQVRQRA +KT +YLEQL+LKH
Sbjct: 118 VFTNTILQQAVVVEFTVHSQLCDDCRRAEAKDFWRACVQVRQRAEFKKTLFYLEQLLLKH 177
Query: 610 KAHENTLG 633
AH+ G
Sbjct: 178 SAHKECTG 185
Score = 68.5 bits (160), Expect = 2e-10
Identities = 25/45 (55%), Positives = 34/45 (75%)
Frame = +2
Query: 119 ILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCE 253
I CC+C V IE NP+NMC CLR+ VDIT+GI +Q T++ C+ C+
Sbjct: 13 IACCECGVAIEPNPANMCSGCLRSRVDITEGITRQCTIYMCKFCD 57
>UniRef50_P38861 Cluster: Nonsense-mediated mRNA decay protein 3;
n=8; Ascomycota|Rep: Nonsense-mediated mRNA decay
protein 3 - Saccharomyces cerevisiae (Baker's yeast)
Length = 518
Score = 128 bits (310), Expect = 1e-28
Identities = 58/126 (46%), Positives = 81/126 (64%)
Frame = +1
Query: 253 KYLQPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEV 432
++LQPP +W+ LESRE + V+L+DA F WTEPHS+RI++KLTVQGE
Sbjct: 63 RFLQPPGQWIRAELESRELLAICLRRLKGLTFVRLVDASFIWTEPHSRRIRIKLTVQGEA 122
Query: 433 IGGAVLQQTFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLILKHK 612
+ ++QQTF VE+ + C C T RA VQ+RQ+ +++TF +LEQLILKH
Sbjct: 123 MTNTIIQQTFEVEYIVIAMQCPDCARSYTTNTWRATVQIRQKVPHKRTFLFLEQLILKHN 182
Query: 613 AHENTL 630
AH +T+
Sbjct: 183 AHVDTI 188
Score = 60.5 bits (140), Expect = 5e-08
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 71 MEYFAPENASLSNNTRILCCQCAVPIEANPSN-MCVACLRAHVDITDGIPKQATLFFCRG 247
ME+ + N +LCC C PI+ + MC C++ VDIT GIP++A + FCR
Sbjct: 1 MEFTPIDPHQHQNAATLLCCNCGTPIDGSTGLVMCYDCIKLTVDITQGIPREANISFCRN 60
Query: 248 CENICNHP 271
CE P
Sbjct: 61 CERFLQPP 68
>UniRef50_A7PYY1 Cluster: Chromosome chr4 scaffold_39, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr4 scaffold_39, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 504
Score = 126 bits (303), Expect = 8e-28
Identities = 62/121 (51%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
Frame = +1
Query: 256 YLQPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEVI 435
YLQPP W+ LES+E ++V+LI A F WTEPHSKRIKVKL VQ EV+
Sbjct: 57 YLQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRVQKEVL 116
Query: 436 GGAVLQQTFIVEFTIQHQMCDAC-HLQKLKITGRALVQVRQRANNRKTFYYLEQLILKHK 612
GA+L+Q +IVEF Q MC++C +Q A VQ+RQ +R+TF+YLEQLIL+H
Sbjct: 117 NGAILEQAYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILRHD 176
Query: 613 A 615
A
Sbjct: 177 A 177
Score = 63.7 bits (148), Expect = 5e-09
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +2
Query: 119 ILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCENICNHP 271
+LCC+C +P+ N +NMCV CLR+ +DIT+G+ K T+ C C+ P
Sbjct: 11 VLCCKCGIPMTPNAANMCVKCLRSEIDITEGLQKHVTIVHCPECDTYLQPP 61
>UniRef50_A0EA85 Cluster: Chromosome undetermined scaffold_86, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_86,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 537
Score = 124 bits (298), Expect = 3e-27
Identities = 60/126 (47%), Positives = 82/126 (65%)
Frame = +1
Query: 253 KYLQPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEV 432
+YL+PP W +C ES+E ++VK+IDA F +TEP SKRIKVKLT+Q EV
Sbjct: 59 RYLRPP--WTLCERESKELLSICLKRLRGLNKVKIIDAAFVYTEPSSKRIKVKLTIQKEV 116
Query: 433 IGGAVLQQTFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLILKHK 612
+ +QQTFI EF +Q C+ C + T A VQVRQR +++KTF+YLEQL+LK+
Sbjct: 117 LNNTNMQQTFICEFVEHYQQCEDCKKEFTPHTWGAAVQVRQRVDHKKTFFYLEQLLLKYN 176
Query: 613 AHENTL 630
A++ L
Sbjct: 177 ANDKVL 182
>UniRef50_Q5K9L0 Cluster: RNA binding protein, putative; n=5;
Dikarya|Rep: RNA binding protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 564
Score = 121 bits (292), Expect = 2e-26
Identities = 59/130 (45%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Frame = +1
Query: 244 GL*KYLQPPSEWVVCALESREXXXXXXXXXXXX-SRVKLIDAGFAWTEPHSKRIKVKLTV 420
G K+L PP+ W+ ESRE +V+LIDA F WTEPHS+RIK+K+T+
Sbjct: 60 GCEKFLSPPNTWIAVQPESRELLAICLKKIARPLMKVRLIDASFIWTEPHSRRIKLKITI 119
Query: 421 QGEVIGGAVLQQTFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLI 600
Q EV+ VLQQTF + + C +C K T +A VQVRQ+ +++TF +LEQLI
Sbjct: 120 QKEVLAHTVLQQTFELTLVVHTGQCPSCTRLAAKNTWKASVQVRQKVTHKRTFLWLEQLI 179
Query: 601 LKHKAHENTL 630
LKH AH++T+
Sbjct: 180 LKHNAHKDTI 189
Score = 67.7 bits (158), Expect = 3e-10
Identities = 35/68 (51%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +2
Query: 71 MEYFAPENASLSNNTRILCCQCAVPIE-ANPSNMCVACLRAHVDITDGIPKQATLFFCRG 247
MEY P+ A + ILC C I AN + +CV CLR VDIT+GIPK+ATL FCRG
Sbjct: 4 MEY-TPDAAG--QESYILCADCGTVISSANGAGLCVGCLRNTVDITEGIPKEATLNFCRG 60
Query: 248 CENICNHP 271
CE + P
Sbjct: 61 CEKFLSPP 68
>UniRef50_UPI00006CFAB5 Cluster: NMD3 family protein; n=1;
Tetrahymena thermophila SB210|Rep: NMD3 family protein -
Tetrahymena thermophila SB210
Length = 625
Score = 117 bits (282), Expect = 3e-25
Identities = 54/126 (42%), Positives = 79/126 (62%)
Frame = +1
Query: 253 KYLQPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEV 432
+Y +PP WV C ES+E +VKLID+ F +TEPHS+RI+++LT+Q EV
Sbjct: 78 RYNKPP--WVYCERESKEMLSLCLKKIKGLEKVKLIDSAFLYTEPHSRRIRIRLTIQKEV 135
Query: 433 IGGAVLQQTFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLILKHK 612
+ +QQ F+VEF + CD C + T A VQ+RQ+ ++KTF++LEQ++LKH
Sbjct: 136 MNNTSIQQNFVVEFVEHYGQCDDCKKEFTPHTWGAQVQLRQKVEHKKTFFFLEQVMLKHN 195
Query: 613 AHENTL 630
AH+ L
Sbjct: 196 AHDKVL 201
Score = 50.8 bits (116), Expect = 4e-05
Identities = 25/53 (47%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 119 ILCCQCAVPIEA--NPSNMCVACLRAHVDITDGIPKQATLFFCRGCENICNHP 271
ILCC C V A +NMCV CL DIT GI KQ + FCR C P
Sbjct: 31 ILCCMCGVSFNAAQTRTNMCVNCLTNQQDITTGITKQGVVNFCRMCRRYNKPP 83
>UniRef50_A7ARX8 Cluster: Nonsense-mediated mRNA decay protein,
putative; n=1; Babesia bovis|Rep: Nonsense-mediated mRNA
decay protein, putative - Babesia bovis
Length = 549
Score = 111 bits (268), Expect = 1e-23
Identities = 55/147 (37%), Positives = 83/147 (56%)
Frame = +1
Query: 277 WVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEVIGGAVLQQ 456
W+ C LES+E +K+I+A F+WTEPHSK++KVK+ VQ EV V++Q
Sbjct: 71 WLKCDLESKELLSICLKKAKGLENMKIINAAFSWTEPHSKQLKVKVCVQKEVDSNFVVEQ 130
Query: 457 TFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLILKHKAHENTLGD 636
+F++ F+I+ CD C T +A+VQ+RQ+ +++ LEQ+I+KH AHEN
Sbjct: 131 SFVITFSIKSSQCDHCKRMYTPHTWKAMVQIRQKTKDKRHILMLEQIIIKHNAHENVTNI 190
Query: 637 QAQA*WTRFPSIQPENPCAPKWLDFNS 717
++ F CA K+ DF S
Sbjct: 191 LSRP--NGFDLHFQSKTCAQKFADFVS 215
>UniRef50_Q4UI16 Cluster: Nonsense-mediated mRNA decay protein (NMD3
homologue), putative; n=2; Theileria|Rep:
Nonsense-mediated mRNA decay protein (NMD3 homologue),
putative - Theileria annulata
Length = 512
Score = 110 bits (264), Expect = 4e-23
Identities = 51/118 (43%), Positives = 71/118 (60%)
Frame = +1
Query: 277 WVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEVIGGAVLQQ 456
W+ C LES+E +K++DA F WTEPHSK++KV +TVQ EV V++Q
Sbjct: 71 WLNCELESKELLSICLKKIKGIDLMKIVDAHFKWTEPHSKKLKVNVTVQKEVENNCVVEQ 130
Query: 457 TFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLILKHKAHENTL 630
+ ++FTI C +C T +ALVQ+RQ+ ++K LEQ+ILKH AHEN L
Sbjct: 131 SLSIDFTIASAQCASCKQMYTPHTWKALVQIRQKTKDKKHILLLEQIILKHNAHENVL 188
>UniRef50_UPI0000499987 Cluster: Nonsense-mediated mRNA decay
protein 3; n=2; Entamoeba histolytica HM-1:IMSS|Rep:
Nonsense-mediated mRNA decay protein 3 - Entamoeba
histolytica HM-1:IMSS
Length = 411
Score = 109 bits (262), Expect = 8e-23
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +1
Query: 277 WVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEVIGGAVLQQ 456
W C ESRE +++KLI+A + WTE HSKR+K+KLTV+ EV V+QQ
Sbjct: 74 WFYCEPESRELMTYLIKRVKGLNKLKLINASYIWTEEHSKRLKIKLTVEKEVFKNTVIQQ 133
Query: 457 TFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLILKHKAHEN 624
F VEF I + CD CH + K T +++VQ+RQ A ++K+ LEQ ILK AH+N
Sbjct: 134 DFNVEFIIVNGFCDNCHKAEAKNTWQSVVQLRQHAEHKKSILTLEQEILKANAHQN 189
Score = 62.5 bits (145), Expect = 1e-08
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 86 PENASL-SNNTRILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCE 253
PE +L +LCC C IE NPS+MC CL +DIT+GIPKQ T+ C+ C+
Sbjct: 10 PEYINLPERKAEMLCCVCGALIEVNPSSMCANCLHKTIDITEGIPKQITIDQCKRCK 66
>UniRef50_Q7RPI5 Cluster: Putative uncharacterized protein PY01474;
n=8; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY01474 - Plasmodium yoelii yoelii
Length = 938
Score = 101 bits (242), Expect = 2e-20
Identities = 45/120 (37%), Positives = 72/120 (60%)
Frame = +1
Query: 271 SEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEVIGGAVL 450
++WV C LES+E ++K++D+ F +TEPHSKRIK+ +TVQ E+I +
Sbjct: 458 NKWVYCELESKELLALCLKKVTKLKKLKILDSKFLYTEPHSKRIKIHITVQEELINNFIS 517
Query: 451 QQTFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLILKHKAHENTL 630
+ FI+ F I++ CD C + T V VRQ+ +++KT +LE L+LK + +EN +
Sbjct: 518 EMEFILHFVIKYTQCDDCKKKYTPYTYNTCVSVRQKVDHKKTLLFLESLLLKSQVNENII 577
>UniRef50_Q7QV23 Cluster: GLP_180_23828_22353; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_180_23828_22353 - Giardia lamblia
ATCC 50803
Length = 491
Score = 100 bits (240), Expect = 4e-20
Identities = 51/117 (43%), Positives = 68/117 (58%)
Frame = +1
Query: 274 EWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEVIGGAVLQ 453
++V LES + V+++DAGF WTE HSKRIKV+L +Q EV GAVLQ
Sbjct: 61 KYVAAELESPQLLGICLKKIRGLQHVRVVDAGFIWTEEHSKRIKVRLLIQAEVQQGAVLQ 120
Query: 454 QTFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLILKHKAHEN 624
Q I FT+ +C C + T VQVRQ N+++TF YLEQ+IL ++A N
Sbjct: 121 QEHICTFTVVSTLCVPCQYTHTEHTWSTRVQVRQTVNHKRTFLYLEQIILHNRAKLN 177
Score = 64.9 bits (151), Expect = 2e-09
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +2
Query: 119 ILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGC 250
ILCC C VPIE NP++MC+ CLRA V+IT GI + TL C C
Sbjct: 9 ILCCSCGVPIEPNPTSMCLPCLRARVNITKGIDTEQTLIHCHQC 52
>UniRef50_A5KA13 Cluster: mRNA decay protein, putative; n=1;
Plasmodium vivax|Rep: mRNA decay protein, putative -
Plasmodium vivax
Length = 892
Score = 97.1 bits (231), Expect = 4e-19
Identities = 44/120 (36%), Positives = 68/120 (56%)
Frame = +1
Query: 271 SEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEVIGGAVL 450
+ WV C LES+E ++K++DA F +TEPHSKRIK+ L+VQ E+I +
Sbjct: 408 NRWVYCELESKELLALCLKKVNKLKKLKILDAKFLYTEPHSKRIKIHLSVQEELINNFIS 467
Query: 451 QQTFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLILKHKAHENTL 630
+ I+ + I++ CD C T V VRQ+ ++KT +LE L+LK+ +EN +
Sbjct: 468 EMELILHYVIKYTQCDDCKKTYTPYTYNTCVSVRQKVEHKKTLLFLESLLLKYNMNENII 527
Score = 36.3 bits (80), Expect = 0.85
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 APENASLSNNTRILCCQCAVPIEANPSNMCVACLRAHVDITD-GIPKQATL-FFCRGCE 253
A E+ N I C C I+AN S MC C+ +V+ + I K L ++CR C+
Sbjct: 345 AAEHQQSDNTQLIACILCGDSIKANASKMCSNCILQNVESSSVNINKDTYLIYYCRECK 403
>UniRef50_Q336P7 Cluster: NMD3 family protein, expressed; n=7;
Magnoliophyta|Rep: NMD3 family protein, expressed -
Oryza sativa subsp. japonica (Rice)
Length = 523
Score = 95.5 bits (227), Expect = 1e-18
Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 4/122 (3%)
Frame = +1
Query: 256 YLQPPSEWVVCALESREXXXXXXXXXXXXS---RVKLIDAGFAWTEPHSKRIKVKLTVQG 426
YLQPP W+ ES E RV L A F ++EPHSKR+++KL ++
Sbjct: 70 YLQPPRSWLRAGPESPELMQILLRRLNRPLARLRVSLSAAEFVFSEPHSKRLRLKLRLRR 129
Query: 427 EVIGGAVLQQTFIVEFTIQHQMCDAC-HLQKLKITGRALVQVRQRANNRKTFYYLEQLIL 603
EV VL+QT VEFT+ ++CDAC Q A+VQ+RQ +R+TF YLEQL+L
Sbjct: 130 EVFNAVVLEQTHPVEFTVHDRLCDACARAQSNPDQWVAVVQLRQHVPHRRTFLYLEQLLL 189
Query: 604 KH 609
KH
Sbjct: 190 KH 191
Score = 67.3 bits (157), Expect = 4e-10
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = +2
Query: 119 ILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCENICNHPLSGL 283
+LCC C V ++ NP+NMC C+RA VDIT+G+P+ A + +C C + P S L
Sbjct: 24 VLCCICGVAMQPNPANMCARCIRARVDITEGVPRHAAVVYCPDCTSYLQPPRSWL 78
>UniRef50_Q8IBG6 Cluster: Putative uncharacterized protein
PF07_0121; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF07_0121 - Plasmodium
falciparum (isolate 3D7)
Length = 888
Score = 95.1 bits (226), Expect = 2e-18
Identities = 43/120 (35%), Positives = 68/120 (56%)
Frame = +1
Query: 271 SEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEVIGGAVL 450
+ WV C LES+E ++K++DA F +TEPHSKR+KV ++VQ E+I +
Sbjct: 372 NRWVYCELESKELLALCLKKVNKLKKLKILDAKFLYTEPHSKRLKVHVSVQEELINNFIS 431
Query: 451 QQTFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLILKHKAHENTL 630
+ I+ + I++ CD C + T V VRQ+ ++KT +LE L+LK +EN +
Sbjct: 432 EMEIIIHYVIKYTQCDDCKKKYTPYTYNTCVSVRQKVEHKKTLLFLENLLLKCNMNENII 491
>UniRef50_A0BI83 Cluster: Chromosome undetermined scaffold_109,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_109,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 445
Score = 93.9 bits (223), Expect = 4e-18
Identities = 47/135 (34%), Positives = 76/135 (56%)
Frame = +1
Query: 226 DIILL*GL*KYLQPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIK 405
+I+L +Y +PP WV+C +S+E +ID F +TEP +K+IK
Sbjct: 46 EILLCRNCRRYQRPP--WVLCERDSKELLAICLKKVIGLQEKTIIDTKFIFTEPSTKQIK 103
Query: 406 VKLTVQGEVIGGAVLQQTFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYY 585
+++TVQ E + G +Q + I+ F + C+ C + A +Q+RQR N++K+FYY
Sbjct: 104 LQITVQKEAMNGTCIQDSKILNFEEVYHQCEDCKREFTPHIWGACIQLRQRVNHKKSFYY 163
Query: 586 LEQLILKHKAHENTL 630
LEQLIL+H ++ L
Sbjct: 164 LEQLILQHHMNQQML 178
>UniRef50_A2EJP0 Cluster: NMD3 family protein; n=2; Trichomonas
vaginalis G3|Rep: NMD3 family protein - Trichomonas
vaginalis G3
Length = 479
Score = 92.7 bits (220), Expect = 9e-18
Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
Frame = +1
Query: 220 TSDIILL*GL*KYLQPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKR 399
TS ++ +Y P+ W LES E +K++D+ F +TEPHS+R
Sbjct: 46 TSAVVYCKNCGRYQTGPTTWQHAELESPELLSICLSKVNGLKDMKIVDSQFLYTEPHSRR 105
Query: 400 IKVKLTVQGEVIGGAVLQQTFIVEFTIQHQMCDAC-HLQKLKITGRALVQVRQRANNRKT 576
I+V LT+Q E + G VL+QT IV F + C C + A VQ+RQ ++++
Sbjct: 106 IRVSLTLQKEALNGTVLRQTVIVTFVVNIVQCPKCVEAATPREHWIANVQLRQNVRHKRS 165
Query: 577 FYYLEQLILKHKAHENT 627
+ LEQLILKH+AH T
Sbjct: 166 LFRLEQLILKHRAHAGT 182
Score = 59.3 bits (137), Expect = 1e-07
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +2
Query: 116 RILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGC 250
++ CC C VP E NP NMC+ CL+ VD TD +P + + +C+ C
Sbjct: 11 KVPCCICGVPTEPNPFNMCIDCLKQKVDFTDTVPNTSAVVYCKNC 55
>UniRef50_Q6CF61 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 564
Score = 90.6 bits (215), Expect = 4e-17
Identities = 51/126 (40%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Frame = +1
Query: 265 PPSEWVVCALESREXXXXXXXXXXXX--SRVKLIDAGFAWTEPHSKRIKVKLTVQGE--V 432
P W++ ESRE S V+L+DA F WTEPHS+R KVK+TV+GE
Sbjct: 92 PGRAWIIAPQESRERLALCLKKIKGLTSSEVRLVDAQFLWTEPHSRRNKVKVTVRGESPQ 151
Query: 433 IGGAVLQQTFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLILKHK 612
+QQ +VEFT C C A VQVRQ+ +++KTF+YLEQLILK +
Sbjct: 152 FPNITVQQDCVVEFTEGSGQCPDCAKSFTANKWTAQVQVRQKVDHKKTFFYLEQLILKSR 211
Query: 613 AHENTL 630
+ +
Sbjct: 212 MDDECI 217
>UniRef50_A2F1J4 Cluster: NMD3 family protein; n=1; Trichomonas
vaginalis G3|Rep: NMD3 family protein - Trichomonas
vaginalis G3
Length = 438
Score = 83.8 bits (198), Expect = 4e-15
Identities = 41/126 (32%), Positives = 75/126 (59%), Gaps = 1/126 (0%)
Frame = +1
Query: 253 KYLQPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEV 432
+Y + + WV LES+E +K+ DA F WTEPHSKR++V++TV E
Sbjct: 55 RYQESLTHWVNAELESKELLQICIKKFSP--NLKIRDAKFLWTEPHSKRLRVQVTVDRED 112
Query: 433 IGGAVLQQTFIVEFTIQHQMCDAC-HLQKLKITGRALVQVRQRANNRKTFYYLEQLILKH 609
G +L+Q+ IV + ++ C C L + +A+VQ+RQ ++++++ +++EQ+I+ +
Sbjct: 113 FSGTILRQSTIVTYIVKTVQCKTCQELATHRDHWKAIVQLRQHSDSKRSMFWIEQMIINN 172
Query: 610 KAHENT 627
+A + T
Sbjct: 173 EAAKET 178
Score = 56.4 bits (130), Expect = 7e-07
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +2
Query: 116 RILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGC 250
+I CC C + IE NP+NMCV C R ++ +G+P+Q + +CR C
Sbjct: 9 KIPCCICGIMIEPNPNNMCVECFRRRLNQKEGVPEQLEINYCRDC 53
>UniRef50_Q5JK50 Cluster: Putative uncharacterized protein
OJ1294_F06.16; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1294_F06.16 - Oryza sativa subsp. japonica (Rice)
Length = 514
Score = 82.6 bits (195), Expect = 1e-14
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 14/139 (10%)
Frame = +1
Query: 256 YLQPPSEWVVCALESREXXXXXXXXXXXXSR---VKLIDAGFAWTEPHSKRIKVKLTVQG 426
YL PP W+ A ES E V L A F +TEPHS+R+ ++L ++G
Sbjct: 76 YLHPPRLWLRAAPESPELMSLLLRRVDRHIARLGVALAAAEFVFTEPHSRRLMLRLRLRG 135
Query: 427 EVI----GGAVLQQTFIVEFTIQHQMCDACHLQKLKIT-------GRALVQVRQRANNRK 573
EV+ GG L+Q +VEF + ++CDAC + + + A+VQVRQRA++R+
Sbjct: 136 EVLHGSGGGVTLEQGHVVEFAVHDRLCDACAMARARAAEPPDQCGWSAVVQVRQRASHRR 195
Query: 574 TFYYLEQLILKHKAHENTL 630
T +LEQ ++ H A + L
Sbjct: 196 TLLHLEQQVVAHGAAGDAL 214
Score = 57.6 bits (133), Expect = 3e-07
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +2
Query: 65 MKMEYFAPENASLSNNTRILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCR 244
+ M++ P + +CC C VP+ N +N C C+R+ VDI G+P+ A + C
Sbjct: 12 LSMQFLPPRPEPAAAARTSICCTCGVPMAPNAANTCALCIRSRVDIAAGVPRHADVVHCP 71
Query: 245 GCENICNHP 271
C + + P
Sbjct: 72 SCSSYLHPP 80
>UniRef50_Q8SQL6 Cluster: NON SENSE MEDIATED mRNA DECAY PROTEIN 3;
n=1; Encephalitozoon cuniculi|Rep: NON SENSE MEDIATED
mRNA DECAY PROTEIN 3 - Encephalitozoon cuniculi
Length = 424
Score = 74.5 bits (175), Expect = 3e-12
Identities = 41/128 (32%), Positives = 67/128 (52%)
Frame = +1
Query: 244 GL*KYLQPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQ 423
G +YL PP W+ + S+E + + ++D+ F +TEP+SKRI V L V+
Sbjct: 44 GCERYLHPPKSWMEFSWGSKEFLLFLIRRNKTLNGLCIVDSNFVYTEPNSKRIVVALVVR 103
Query: 424 GEVIGGAVLQQTFIVEFTIQHQMCDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLIL 603
++Q + + I++ C C + K +LVQVR RA +R+ F YLE L+L
Sbjct: 104 E-----CGVEQPLEMRYVIRNMQCPDCAKVEAKQFWNSLVQVRHRAGHRRMFIYLEHLVL 158
Query: 604 KHKAHENT 627
K+ + +T
Sbjct: 159 KNNVYGDT 166
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = +2
Query: 119 ILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCENICNHPLS 277
ILCC+C +PIE NMC CL V I+ + + + CRGCE + P S
Sbjct: 2 ILCCKCGIPIEPRLMNMCDRCLVTEVTISSKVKRNLAVERCRGCERYLHPPKS 54
>UniRef50_A5AJ02 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 359
Score = 53.2 bits (122), Expect = 7e-06
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +2
Query: 116 RILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLF 235
R+LCC+C +PI N ++MCV CL + VDIT+ K T+F
Sbjct: 16 RVLCCKCGIPIVPNAASMCVKCLSSEVDITEDFGKNDTIF 55
>UniRef50_Q0DJ34 Cluster: Os05g0333000 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os05g0333000 protein -
Oryza sativa subsp. japonica (Rice)
Length = 142
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Frame = +1
Query: 349 VKLIDAGFAWTEPHSKRIKVKLTVQGEVI---GGAVLQQTFIVEFTIQHQMCDAC 504
V L A F +TEP+SKR+ ++L ++GEV+ G L+Q VEF + ++ +AC
Sbjct: 85 VVLAAAEFVFTEPYSKRLMLRLRLRGEVLHGSSGVTLEQGHAVEFAVHDRLYNAC 139
>UniRef50_A7QHN7 Cluster: Chromosome chr8 scaffold_99, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_99, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 118
Score = 43.6 bits (98), Expect = 0.006
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +1
Query: 481 QHQMCDAC-HLQKLKITGRALVQVRQRANNRKTFYYLEQLILKHKAHENTLG-DQAQA*W 654
Q MC++C +Q A VQ+RQ ++++TF+YLE+LI +H A + Q W
Sbjct: 52 QKHMCESCSRVQANPDQWVASVQLRQHVSHKQTFFYLEELIFRHDAESRVIKIKQIYCWW 111
Query: 655 TRFP 666
++P
Sbjct: 112 KKWP 115
>UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 234
Score = 43.6 bits (98), Expect = 0.006
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 146 IEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCENICNHPLSGL 283
++ NP+NMC C+RA V+I +G+P A + +C C + P S L
Sbjct: 1 MQPNPANMCTRCIRAGVNIIEGVPSHAAV-YCPDCTSYLQPPRSWL 45
>UniRef50_A2Y3B2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 190
Score = 41.1 bits (92), Expect = 0.030
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = +1
Query: 349 VKLIDAGFAWTEPHSKRIKVKLTVQGEVI---GGAVLQQTFIVEFTIQHQMCDA 501
V L A F +TEP+SKR+ ++L ++GEV+ G L+Q VEF + ++ +A
Sbjct: 13 VVLAAAEFVFTEPYSKRLMLRLRLRGEVLHGSSGVTLEQGHAVEFAVHDRLYNA 66
>UniRef50_A7PWF6 Cluster: Chromosome chr8 scaffold_34, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_34, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 104
Score = 39.9 bits (89), Expect = 0.069
Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = -2
Query: 282 NPLRGWLQIF------SQPLQKNNVACLGIPSVMST*ALKQATHIFEGFASIGTAH*QH 124
N R W+Q S Q VACL PSV+ST LK THI +IG H QH
Sbjct: 31 NTNRAWIQALGGCRYRSHSGQCRRVACLCKPSVISTSELKHLTHILAALGTIGIPHLQH 89
>UniRef50_A6GVM4 Cluster: Probable type I
endonuclease-methyltransferase fusion protein; n=1;
Flavobacterium psychrophilum JIP02/86|Rep: Probable type
I endonuclease-methyltransferase fusion protein -
Flavobacterium psychrophilum (strain JIP02/86 / ATCC
49511)
Length = 1011
Score = 35.1 bits (77), Expect = 2.0
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 358 IDAGFAWTEPHSKRIKVKLTVQGEVIGGAVLQQTFIVEFTIQHQ-MCDACHLQKLKITGR 534
ID GF W+ +K IK K+ +Q V ++Q V ++ Q + D + KL +
Sbjct: 138 IDTGFIWSSIEAKEIKDKINLQNRV-DKFLIQSLINVSRELEEQGLTDKNLIHKLVMRSL 196
Query: 535 ALVQVRQRANNRKTFY 582
L+ + R +K FY
Sbjct: 197 FLLYLEDRGATKKEFY 212
>UniRef50_UPI00006A1959 Cluster: UPI00006A1959 related cluster; n=2;
Xenopus tropicalis|Rep: UPI00006A1959 UniRef100 entry -
Xenopus tropicalis
Length = 453
Score = 33.9 bits (74), Expect = 4.6
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 71 MEYFAPENASLSNNTRILCCQCAVPIEANPSNMCVAC 181
+E P + S +TRILCCQC P+ A S CV C
Sbjct: 78 VEICLPSSPS-QGDTRILCCQCDPPVRATKS--CVQC 111
>UniRef50_Q8ILC6 Cluster: Putative uncharacterized protein; n=4;
Eukaryota|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1993
Score = 33.1 bits (72), Expect = 8.0
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Frame = +1
Query: 460 FIVEFTIQHQM-CDACHLQKLKITGRALVQVRQRANNRKTFYYLEQLILKHKAHENTLGD 636
FI+ + H + C C L+K K L V NN K F ++ +K+ +
Sbjct: 7 FIIFLNVYHNIICQFCFLKKRKSVKNLLFSVCPNGNNYKRFNIYKRSTIKYDKKRKNIYL 66
Query: 637 QAQA*WTRFPSIQPENPCAPKWLDFNSIWFL 729
T+FP I+ N C ++ W L
Sbjct: 67 LLPNNNTKFPIIKNGNYCILNKCTYSRRWNL 97
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,631,299
Number of Sequences: 1657284
Number of extensions: 15109410
Number of successful extensions: 32235
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 31137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32213
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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