Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30546
         (784 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY047562-1|AAK77294.1|  478|Drosophila melanogaster GH07619p pro...    75   1e-13
AE014296-392|AAF47596.1|  478|Drosophila melanogaster CG1017-PA ...    75   1e-13

>AY047562-1|AAK77294.1|  478|Drosophila melanogaster GH07619p
           protein.
          Length = 478

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +3

Query: 3   LDKEEDVFKQDFSGPTLDDHFDKTVLPKVMQVKKFGRSGRTKY 131
           LD+E DV K+DF+  TL+DHFDKT+LPKVMQVK FGR GRTKY
Sbjct: 387 LDEENDVLKRDFAQATLEDHFDKTILPKVMQVKNFGRCGRTKY 429



 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
 Frame = +1

Query: 133 THLVDQDTTEFDSAWSNETSA-ARLTN-FRGGMKQVFEKPS 249
           THLVDQDTT+FDS W  E+S+  +  N   GGM+Q F+KP+
Sbjct: 430 THLVDQDTTKFDSPWYAESSSNIKFHNEHAGGMRQQFDKPT 470


>AE014296-392|AAF47596.1|  478|Drosophila melanogaster CG1017-PA
           protein.
          Length = 478

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +3

Query: 3   LDKEEDVFKQDFSGPTLDDHFDKTVLPKVMQVKKFGRSGRTKY 131
           LD+E DV K+DF+  TL+DHFDKT+LPKVMQVK FGR GRTKY
Sbjct: 387 LDEENDVLKRDFAQATLEDHFDKTILPKVMQVKNFGRCGRTKY 429



 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
 Frame = +1

Query: 133 THLVDQDTTEFDSAWSNETSA-ARLTN-FRGGMKQVFEKPS 249
           THLVDQDTT+FDS W  E+S+  +  N   GGM+Q F+KP+
Sbjct: 430 THLVDQDTTKFDSPWYAESSSNIKFHNEHAGGMRQQFDKPT 470


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,146,877
Number of Sequences: 53049
Number of extensions: 730505
Number of successful extensions: 1325
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)