Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30543
(586 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellu... 115 9e-25
UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1; Ostreoc... 107 1e-22
UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|R... 97 3e-19
UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2; Thermo... 75 2e-12
UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultu... 73 7e-12
UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishma... 72 9e-12
UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiell... 70 5e-11
UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15; Archa... 66 6e-10
UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3; ... 58 1e-07
UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole ge... 52 1e-05
UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1; ... 50 5e-05
UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3; ... 42 0.008
UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n... 42 0.014
UniRef50_Q9XTP8 Cluster: 205 kDa Pk1(B+)1+ SICAvar antigen; n=1;... 34 2.2
UniRef50_Q4PFP0 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellul... 33 3.8
UniRef50_Q7VCT6 Cluster: Predicted protein; n=1; Prochlorococcus... 33 5.0
UniRef50_Q86AR1 Cluster: Similar to Dictyostelium discoideum (Sl... 33 5.0
UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellu... 33 6.6
UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11; ... 33 6.6
>UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellular
organisms|Rep: 40S ribosomal protein S14 - Homo sapiens
(Human)
Length = 151
Score = 115 bits (276), Expect = 9e-25
Identities = 58/85 (68%), Positives = 62/85 (72%)
Frame = +3
Query: 255 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 434
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 435 XXXMKIGRIEDVTPVPSDSTRRKGG 509
MKIGRIEDVTP+PSDSTRRKGG
Sbjct: 121 RSGMKIGRIEDVTPIPSDSTRRKGG 145
Score = 97.1 bits (231), Expect = 3e-19
Identities = 45/61 (73%), Positives = 50/61 (81%)
Frame = +1
Query: 76 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGI 255
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGG+
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 256 R 258
+
Sbjct: 61 K 61
>UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S14 -
Ostreococcus tauri
Length = 243
Score = 107 bits (258), Expect = 1e-22
Identities = 55/90 (61%), Positives = 60/90 (66%)
Frame = +3
Query: 240 CHWWHKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXX 419
C KVKADRDE+SPYAAMLAAQDVA +CK LGITALHIK+RA Q
Sbjct: 103 CTGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKMRAKGGNKTKSPGPGGQSA 162
Query: 420 XXXXXXXXMKIGRIEDVTPVPSDSTRRKGG 509
+KIGRIEDVTP P+DSTRRKGG
Sbjct: 163 LRALSRSGIKIGRIEDVTPTPTDSTRRKGG 192
Score = 48.8 bits (111), Expect = 9e-05
Identities = 25/40 (62%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +1
Query: 85 RKNKVAKEEVQVT-LGPQHLVGETVFGVAHIFASFNDTFV 201
R V+ V T +GPQ GE VFGVAHIFASFNDTFV
Sbjct: 5 RHRSVSVRRVMATYVGPQAREGELVFGVAHIFASFNDTFV 44
Score = 34.7 bits (76), Expect = 1.6
Identities = 13/19 (68%), Positives = 18/19 (94%)
Frame = +1
Query: 202 HVTDLSGRETIARVTGGIR 258
HVTDLSG+ET++R TGG++
Sbjct: 90 HVTDLSGKETLSRCTGGMK 108
>UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|Rep:
Ribosomal protein S14 - Palaemonetes pugio
Length = 77
Score = 97.1 bits (231), Expect = 3e-19
Identities = 46/59 (77%), Positives = 48/59 (81%)
Frame = +1
Query: 76 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGG 252
MAPRK K KEEVQV LGPQ GE VF V HI+AS+NDTFVHVTDLSGRETI RVTGG
Sbjct: 1 MAPRKGKTPKEEVQVQLGPQVREGENVFAVCHIYASYNDTFVHVTDLSGRETIIRVTGG 59
>UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S11P -
Cenarchaeum symbiosum
Length = 198
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/85 (43%), Positives = 48/85 (56%)
Frame = +3
Query: 258 VKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXX 437
V ADR E+SP+AAM AA V E + G T HI++RA AQ
Sbjct: 109 VNADRYESSPFAAMKAANKVIESARAKGFTGFHIRVRAVGGVGSRVPGPGAQAAIRALAR 168
Query: 438 XXMKIGRIEDVTPVPSDSTRRKGGE 512
+IGRI+DVTP+P D+TR+KGG+
Sbjct: 169 GGFRIGRIDDVTPIPHDTTRKKGGK 193
Score = 48.0 bits (109), Expect = 2e-04
Identities = 17/42 (40%), Positives = 31/42 (73%)
Frame = +1
Query: 130 PQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGI 255
P+ + G+AHI++S+N+T +H+TDL+G ET++ +GG+
Sbjct: 66 PETTPADEKLGIAHIYSSYNNTIIHMTDLTGAETVSISSGGV 107
>UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultured
euryarchaeote ARMAN-2|Rep: 30S ribosomal protein S11 -
uncultured euryarchaeote ARMAN-2
Length = 169
Score = 72.5 bits (170), Expect = 7e-12
Identities = 37/85 (43%), Positives = 49/85 (57%)
Frame = +3
Query: 258 VKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXX 437
V AD E SPYAAM AA VA + K GIT ++I++RA AQ
Sbjct: 80 VNADSQEGSPYAAMQAAYKVAAEAKEKGITNINIEIRAPGGHGSKTPGHGAQAVVRVLAR 139
Query: 438 XXMKIGRIEDVTPVPSDSTRRKGGE 512
+++ RIEDVTP+P+D+TRR GG+
Sbjct: 140 SGLRVNRIEDVTPIPTDTTRRPGGK 164
Score = 41.9 bits (94), Expect = 0.011
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +1
Query: 157 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGI 255
+ VAH+++S NDT + +TDLSG ETIA +GG+
Sbjct: 46 WAVAHVYSSKNDTIITLTDLSGSETIAVGSGGM 78
>UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishmania
major|Rep: 40S ribosomal protein S14 - Leishmania major
Length = 203
Score = 72.1 bits (169), Expect = 9e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +1
Query: 103 KEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGIR 258
K+EV+ GP G+ V+GV HIFASFNDTFVHVTD+SGRET +VTGG++
Sbjct: 13 KQEVKA-YGPNVKKGDLVYGVVHIFASFNDTFVHVTDMSGRETYVKVTGGMK 63
Score = 66.5 bits (155), Expect = 4e-10
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3
Query: 255 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 371
KVKADRDE+SPYAAM+AAQDV +CK GI ALH+K+RA
Sbjct: 63 KVKADRDESSPYAAMMAAQDVVARCKECGINALHVKMRA 101
>UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiella
natans|Rep: Ribosomal protein S14 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 145
Score = 69.7 bits (163), Expect = 5e-11
Identities = 36/78 (46%), Positives = 42/78 (53%)
Frame = +3
Query: 270 RDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMK 449
+D+ S Y AMLA Q V+ CK LGI ALHIK+RA A K
Sbjct: 50 KDKKSNYCAMLATQKVSNVCKVLGINALHIKIRARGGNASHLISTGAHTVVTTLVRLGFK 109
Query: 450 IGRIEDVTPVPSDSTRRK 503
IGRIED TP P++ TRRK
Sbjct: 110 IGRIEDTTPTPTNGTRRK 127
Score = 48.8 bits (111), Expect = 9e-05
Identities = 18/34 (52%), Positives = 28/34 (82%)
Frame = +1
Query: 154 VFGVAHIFASFNDTFVHVTDLSGRETIARVTGGI 255
+FG+ HI ++ NDT +HVTD++G ETI+R++ GI
Sbjct: 11 LFGILHILSTKNDTIIHVTDITGSETISRISSGI 44
>UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15;
Archaea|Rep: 30S ribosomal protein S11P - Methanococcus
jannaschii
Length = 129
Score = 66.1 bits (154), Expect = 6e-10
Identities = 37/78 (47%), Positives = 42/78 (53%)
Frame = +3
Query: 270 RDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMK 449
RDE SPYAAM AA +AE K GI +HIK+RA AQ ++
Sbjct: 47 RDEGSPYAAMQAAFKLAEVLKERGIENIHIKVRAPGGSGQKNPGPGAQAAIRALARAGLR 106
Query: 450 IGRIEDVTPVPSDSTRRK 503
IGRIEDVTPVP D T K
Sbjct: 107 IGRIEDVTPVPHDGTTPK 124
Score = 50.4 bits (115), Expect = 3e-05
Identities = 18/32 (56%), Positives = 28/32 (87%)
Frame = +1
Query: 157 FGVAHIFASFNDTFVHVTDLSGRETIARVTGG 252
+G+ HI++S+N+T +H TD++G ETIARV+GG
Sbjct: 9 WGIVHIYSSYNNTIIHATDITGAETIARVSGG 40
>UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3;
Homo/Pan/Gorilla group|Rep: Similar to ribosomal protein
S14 - Homo sapiens (Human)
Length = 350
Score = 58.4 bits (135), Expect = 1e-07
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = +3
Query: 255 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 371
K +AD+DE+SP AML AQDV ++CK LGITALHIKL A
Sbjct: 2 KEQADQDESSPCTAMLTAQDVVQRCKELGITALHIKLLA 40
>UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_246, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 182
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +3
Query: 255 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 371
K K D +E+SP AAM AAQDV+++CK L IT LH+KL A
Sbjct: 60 KEKTDGEESSPCAAMPAAQDVSQECKELDITVLHVKLHA 98
>UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 104
Score = 49.6 bits (113), Expect = 5e-05
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +3
Query: 255 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 371
K KAD +E+SP AAM AAQDV+++ K L IT LH+KL A
Sbjct: 39 KEKADGEESSPCAAMPAAQDVSQRFKELDITVLHVKLHA 77
>UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 332
Score = 42.3 bits (95), Expect = 0.008
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +3
Query: 255 KVKADRDEASPYAAMLAAQDVAEKCK 332
K+KAD DE+SPYAAML +QDVA CK
Sbjct: 216 KIKADCDESSPYAAMLVSQDVALCCK 241
>UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBF82A UniRef100 entry -
Rattus norvegicus
Length = 119
Score = 41.5 bits (93), Expect = 0.014
Identities = 17/36 (47%), Positives = 27/36 (75%)
Frame = +1
Query: 118 VTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGR 225
++L PQ + G+ V GV +IFASF D+F++ TD+ G+
Sbjct: 5 LSLRPQVVEGQNVLGVCYIFASFGDSFIYGTDVYGK 40
>UniRef50_Q9XTP8 Cluster: 205 kDa Pk1(B+)1+ SICAvar antigen; n=1;
Plasmodium knowlesi|Rep: 205 kDa Pk1(B+)1+ SICAvar
antigen - Plasmodium knowlesi
Length = 1759
Score = 34.3 bits (75), Expect = 2.2
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +2
Query: 305 GTGCSREMQNSWHNGLAHKAPCYWWKQNKDPWSWCSVCTSGS 430
GT NS NG H PC+W K +K W C + TSGS
Sbjct: 212 GTKPGTSCHNS--NGKEHCVPCHWDKDDK--WKDCKITTSGS 249
>UniRef50_Q4PFP0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 870
Score = 33.5 bits (73), Expect = 3.8
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = -3
Query: 248 PVTRAIVSRPDKSVT*TNVSLNEAKMCATPNTVSPTKCWGPRVTWTSSLATLFFLGAMAQ 69
P +R I S+P S+T N ++N A + P T S PR + TS+ A+A
Sbjct: 634 PTSRTI-SKPRTSLTGRNSAVNAAPRASAPATASTRSIPRPRASLTSTTTPAASRTALAT 692
Query: 68 PLA*ELSKSKRNLAKRST 15
A + S R RST
Sbjct: 693 TTATTRTPSGRTATTRST 710
>UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellular
organisms|Rep: 30S ribosomal protein S11 - Shewanella
oneidensis
Length = 130
Score = 33.5 bits (73), Expect = 3.8
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 160 GVAHIFASFNDTFVHVTDLSGRETIARVTGG 252
G+AHI ASFN+T V +TD G +GG
Sbjct: 20 GMAHIHASFNNTIVTITDRQGNALSWATSGG 50
>UniRef50_Q7VCT6 Cluster: Predicted protein; n=1; Prochlorococcus
marinus|Rep: Predicted protein - Prochlorococcus marinus
Length = 58
Score = 33.1 bits (72), Expect = 5.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 416 CTSGSCSFKYEDWPH*RCHPRTIRLD 493
C++ SCSF Y+DW H R H + D
Sbjct: 4 CSNRSCSFPYDDWHHCRIHRSKVTND 29
>UniRef50_Q86AR1 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Homeobox-containing protein; n=2; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Homeobox-containing protein - Dictyostelium
discoideum (Slime mold)
Length = 1163
Score = 33.1 bits (72), Expect = 5.0
Identities = 23/81 (28%), Positives = 33/81 (40%)
Frame = -3
Query: 272 TVSLHLMPPVTRAIVSRPDKSVT*TNVSLNEAKMCATPNTVSPTKCWGPRVTWTSSLATL 93
T S L+PP T S P S + T +LN TP +PT P T + ++
Sbjct: 802 TASTVLIPPSTSTSTSTPQPSTSTTITTLNNISTPTTPMPTTPTTPTTPTTPTTPTSTSI 861
Query: 92 FFLGAMAQPLA*ELSKSKRNL 30
GA +LS + + L
Sbjct: 862 EIEGAPGSGNIEQLSNTLKEL 882
>UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellular
organisms|Rep: 30S ribosomal protein S11 - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 134
Score = 32.7 bits (71), Expect = 6.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 160 GVAHIFASFNDTFVHVTDLSGRETIARVTGG 252
G+AH+ ASFN+T + +TD G +GG
Sbjct: 24 GIAHVHASFNNTIITITDRQGNALSWASSGG 54
>UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11;
n=85; Tracheophyta|Rep: Chloroplast 30S ribosomal
protein S11 - Arabidopsis thaliana (Mouse-ear cress)
Length = 138
Score = 32.7 bits (71), Expect = 6.6
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 160 GVAHIFASFNDTFVHVTDLSGR 225
GV H+ ASFN+T V VTD+ GR
Sbjct: 28 GVIHVQASFNNTIVTVTDVRGR 49
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,466,767
Number of Sequences: 1657284
Number of extensions: 11822722
Number of successful extensions: 28514
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 27337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28504
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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