Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30543
(586 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M13934-2|AAB59505.1| 151|Homo sapiens ribosomal protein S14 pro... 115 1e-25
BC091474-1|AAH91474.1| 151|Homo sapiens ribosomal protein S14 p... 115 1e-25
BC020515-1|AAH20515.1| 151|Homo sapiens ribosomal protein S14 p... 115 1e-25
BC006784-1|AAH06784.1| 151|Homo sapiens ribosomal protein S14 p... 115 1e-25
BC003401-1|AAH03401.1| 151|Homo sapiens ribosomal protein S14 p... 115 1e-25
BC001126-1|AAH01126.1| 151|Homo sapiens ribosomal protein S14 p... 115 1e-25
BC072682-1|AAH72682.1| 170|Homo sapiens similar to ribosomal pr... 103 6e-22
>M13934-2|AAB59505.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 115 bits (276), Expect = 1e-25
Identities = 58/85 (68%), Positives = 62/85 (72%)
Frame = +3
Query: 255 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 434
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 435 XXXMKIGRIEDVTPVPSDSTRRKGG 509
MKIGRIEDVTP+PSDSTRRKGG
Sbjct: 121 RSGMKIGRIEDVTPIPSDSTRRKGG 145
Score = 97.1 bits (231), Expect = 4e-20
Identities = 45/61 (73%), Positives = 50/61 (81%)
Frame = +1
Query: 76 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGI 255
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGG+
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 256 R 258
+
Sbjct: 61 K 61
>BC091474-1|AAH91474.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 115 bits (276), Expect = 1e-25
Identities = 58/85 (68%), Positives = 62/85 (72%)
Frame = +3
Query: 255 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 434
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 435 XXXMKIGRIEDVTPVPSDSTRRKGG 509
MKIGRIEDVTP+PSDSTRRKGG
Sbjct: 121 RSGMKIGRIEDVTPIPSDSTRRKGG 145
Score = 97.1 bits (231), Expect = 4e-20
Identities = 45/61 (73%), Positives = 50/61 (81%)
Frame = +1
Query: 76 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGI 255
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGG+
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 256 R 258
+
Sbjct: 61 K 61
>BC020515-1|AAH20515.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 115 bits (276), Expect = 1e-25
Identities = 58/85 (68%), Positives = 62/85 (72%)
Frame = +3
Query: 255 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 434
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 435 XXXMKIGRIEDVTPVPSDSTRRKGG 509
MKIGRIEDVTP+PSDSTRRKGG
Sbjct: 121 RSGMKIGRIEDVTPIPSDSTRRKGG 145
Score = 97.1 bits (231), Expect = 4e-20
Identities = 45/61 (73%), Positives = 50/61 (81%)
Frame = +1
Query: 76 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGI 255
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGG+
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 256 R 258
+
Sbjct: 61 K 61
>BC006784-1|AAH06784.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 115 bits (276), Expect = 1e-25
Identities = 58/85 (68%), Positives = 62/85 (72%)
Frame = +3
Query: 255 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 434
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 435 XXXMKIGRIEDVTPVPSDSTRRKGG 509
MKIGRIEDVTP+PSDSTRRKGG
Sbjct: 121 RSGMKIGRIEDVTPIPSDSTRRKGG 145
Score = 97.1 bits (231), Expect = 4e-20
Identities = 45/61 (73%), Positives = 50/61 (81%)
Frame = +1
Query: 76 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGI 255
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGG+
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 256 R 258
+
Sbjct: 61 K 61
>BC003401-1|AAH03401.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 115 bits (276), Expect = 1e-25
Identities = 58/85 (68%), Positives = 62/85 (72%)
Frame = +3
Query: 255 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 434
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 435 XXXMKIGRIEDVTPVPSDSTRRKGG 509
MKIGRIEDVTP+PSDSTRRKGG
Sbjct: 121 RSGMKIGRIEDVTPIPSDSTRRKGG 145
Score = 97.1 bits (231), Expect = 4e-20
Identities = 45/61 (73%), Positives = 50/61 (81%)
Frame = +1
Query: 76 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGI 255
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGG+
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 256 R 258
+
Sbjct: 61 K 61
>BC001126-1|AAH01126.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 115 bits (276), Expect = 1e-25
Identities = 58/85 (68%), Positives = 62/85 (72%)
Frame = +3
Query: 255 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 434
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA AQ
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 435 XXXMKIGRIEDVTPVPSDSTRRKGG 509
MKIGRIEDVTP+PSDSTRRKGG
Sbjct: 121 RSGMKIGRIEDVTPIPSDSTRRKGG 145
Score = 97.1 bits (231), Expect = 4e-20
Identities = 45/61 (73%), Positives = 50/61 (81%)
Frame = +1
Query: 76 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGI 255
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGG+
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 256 R 258
+
Sbjct: 61 K 61
>BC072682-1|AAH72682.1| 170|Homo sapiens similar to ribosomal
protein S14 protein.
Length = 170
Score = 103 bits (246), Expect = 6e-22
Identities = 54/91 (59%), Positives = 59/91 (64%)
Frame = +3
Query: 255 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 434
KVKADRDE+SPYAAML QDVA++CK LGI ALHI+LRA AQ
Sbjct: 61 KVKADRDESSPYAAMLTTQDVAQRCKELGIIALHIQLRATGGNRTKTLGPGAQSALRALA 120
Query: 435 XXXMKIGRIEDVTPVPSDSTRRKGGEEDAGC 527
MKIGRIEDVTP+PSDST RKG A C
Sbjct: 121 CSGMKIGRIEDVTPIPSDSTLRKGVTVVAVC 151
Score = 92.7 bits (220), Expect = 9e-19
Identities = 43/61 (70%), Positives = 48/61 (78%)
Frame = +1
Query: 76 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGI 255
MAP K K KEE + LGPQ GE VFGV HIFASFNDTFVHVTDLSG++TI RVTGG+
Sbjct: 1 MAPGKGKEKKEEQVINLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKQTICRVTGGM 60
Query: 256 R 258
+
Sbjct: 61 K 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,175,204
Number of Sequences: 237096
Number of extensions: 2002541
Number of successful extensions: 4796
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4790
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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