Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30539
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    25   0.92 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    24   1.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   3.7  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    22   4.9  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    22   4.9  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   8.6  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   8.6  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   8.6  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   8.6  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   8.6  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = -3

Query: 522 HFLFLLGWEHAFDDITTYIIFFAKVEQLTDFGSTFG 415
           H+   + + H F+ +  Y ++ A + Q+++  +TFG
Sbjct: 499 HYYVNVTFPHLFNGLVDYSLWKALIFQISNLQTTFG 534


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +1

Query: 208 GRPDKQPCSSSDVKGPSCYRPRRDGERKRKSVRGCIV 318
           GR D  P S +     SC   ++ G   R+    C+V
Sbjct: 154 GREDLSPSSLNGYSADSCDSKKKKGPTPRQQEELCLV 190


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 697 PRVPSPRERRFKTAR 741
           P+VPSPR +R  T R
Sbjct: 274 PQVPSPRSQRRYTGR 288


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 14  MKLNVSYPATGCQKLFEVVDEHKLRI 91
           M ++   P+TG Q + +VV  HKL++
Sbjct: 54  MYIHPDSPSTGEQWMQKVVSFHKLKL 79


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 14  MKLNVSYPATGCQKLFEVVDEHKLRI 91
           M ++   P+TG Q + +VV  HKL++
Sbjct: 54  MYIHPDSPSTGEQWMQKVVSFHKLKL 79


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 299 DLRFLSPSRRGL*HEG 252
           +  +LSP  RGL H G
Sbjct: 203 NFHYLSPQSRGLFHRG 218


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 299 DLRFLSPSRRGL*HEG 252
           +  +LSP  RGL H G
Sbjct: 203 NFHYLSPQSRGLFHRG 218


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 299 DLRFLSPSRRGL*HEG 252
           +  +LSP  RGL H G
Sbjct: 203 NFHYLSPQSRGLFHRG 218


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 299 DLRFLSPSRRGL*HEG 252
           +  +LSP  RGL H G
Sbjct: 203 NFHYLSPQSRGLFHRG 218


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 299 DLRFLSPSRRGL*HEG 252
           +  +LSP  RGL H G
Sbjct: 203 NFHYLSPQSRGLFHRG 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,455
Number of Sequences: 336
Number of extensions: 3880
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)