Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30538
         (324 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   2.9  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    23   3.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   3.8  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    23   3.8  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    22   6.6  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    22   6.6  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    21   8.8  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    21   8.8  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 34  ATLHPHHHSTEPKG 75
           A+  PHHH T P G
Sbjct: 715 ASPSPHHHLTSPHG 728


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
 Frame = +2

Query: 68  LRAFCTAFSNSRSPLKNAFNPTV----IGCPAKTTS 163
           ++  C AF  SRS + NA          G P KTT+
Sbjct: 25  IKTICKAFGRSRSFVDNAIRSEATGKSTGRPRKTTA 60


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 31  PATLHPHHHSTEPKGVLHC 87
           PATLH H      + +L+C
Sbjct: 422 PATLHHHQQVHNQQRILYC 440


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 142 TDNRWVKRVLEWRPRI 95
           TDN  V R LEWR +I
Sbjct: 339 TDNPDVARWLEWRKKI 354


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +2

Query: 83  TAFSNSRSPLKNAFNPTVIGCPAKTTS 163
           T F N   P+   +NPT   C A  TS
Sbjct: 68  TQFGNC-VPVDTTYNPTTTKCAAGFTS 93


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 81  ALRFPIRGLHSRTRLTQRLSVVRLKRPAH*FNIYS 185
           ALR  ++  H    L  RL  VRL+  A   N+Y+
Sbjct: 78  ALRDHLKFSHVERSLDSRLICVRLENIATLCNVYA 112


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +2

Query: 71  RAFCTAFSNSRSPLKNAF 124
           + +C +FS  RSP+   +
Sbjct: 814 KCYCVSFSRCRSPVTGTY 831


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +1

Query: 43  HPHHHSTEPKGVLHCVFQFAVSTQERV*PNG 135
           H HHH  + + ++     ++ ++ ER+ P+G
Sbjct: 785 HHHHHLQQQQQIVGKNTLYSRNSSERMLPSG 815


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 320,063
Number of Sequences: 2352
Number of extensions: 5995
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22045617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)