Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30538
         (324 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2144|AAN09666.2| 1453|Drosophila melanogaster CG9176-PC...    26   9.7  
AE014298-2143|AAF48450.3| 1853|Drosophila melanogaster CG9176-PB...    26   9.7  
AE014297-3684|AAF56376.1| 2768|Drosophila melanogaster CG13648-P...    26   9.7  
AB030577-1|BAA89278.1| 1463|Drosophila melanogaster CNG channel-...    26   9.7  

>AE014298-2144|AAN09666.2| 1453|Drosophila melanogaster CG9176-PC,
           isoform C protein.
          Length = 1453

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 34  ATLHPHHHSTEPKGVLH 84
           A  HPHHH +  +G +H
Sbjct: 582 AAAHPHHHQSHHQGQVH 598


>AE014298-2143|AAF48450.3| 1853|Drosophila melanogaster CG9176-PB,
           isoform B protein.
          Length = 1853

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 34  ATLHPHHHSTEPKGVLH 84
           A  HPHHH +  +G +H
Sbjct: 582 AAAHPHHHQSHHQGQVH 598


>AE014297-3684|AAF56376.1| 2768|Drosophila melanogaster CG13648-PA
           protein.
          Length = 2768

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +1

Query: 52  HHSTEPKGVLHCVFQFAVSTQERV*PNGYRLSG*NDQPIDLIY 180
           +HS EP   L    +F  S +E+  P G ++    ++P +L Y
Sbjct: 97  YHSPEPGTELSIPEKFGCSIEEKFYPEGAQVPSNPNKPCELCY 139


>AB030577-1|BAA89278.1| 1463|Drosophila melanogaster CNG
           channel-like protein.
          Length = 1463

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 34  ATLHPHHHSTEPKGVLH 84
           A  HPHHH +  +G +H
Sbjct: 582 AAAHPHHHQSHHQGQVH 598


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,408,691
Number of Sequences: 53049
Number of extensions: 246118
Number of successful extensions: 642
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 695070486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)